RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C YJR011CP47086 261 aaPredicted RBP3.35□□□□□ -1.87
MSM1YGR171C LIA1P47120 325 aaKnown RBP3.35□□□□□ -1.87
MSM1YGR171C RPN14P53196 417 aa3.35□□□□□ -1.87
MSM1YGR171C DSL1P53847 754 aa3.35□□□□□ -1.87
MSM1YGR171C SAM50P53969 484 aa3.35□□□□□ -1.87
MSM1YGR171C SLD5Q03406 294 aa3.35□□□□□ -1.87
MSM1YGR171C YMR034CQ05131 434 aaPredicted RBP3.35□□□□□ -1.87
MSM1YGR171C PML1Q07930 204 aaPredicted RBP3.35□□□□□ -1.87
MSM1YGR171C YFL068WP0CX99 160 aa3.34□□□□□ -1.87
MSM1YGR171C YLL066W-AP0CY00 160 aa3.34□□□□□ -1.87
MSM1YGR171C YLL067W-AP0CY01 160 aa3.34□□□□□ -1.87
MSM1YGR171C YCR007CP25354 239 aa3.34□□□□□ -1.87
MSM1YGR171C NDI1P32340 513 aa3.34□□□□□ -1.87
MSM1YGR171C YNK1P36010 153 aaKnown RBP3.34□□□□□ -1.87
MSM1YGR171C MRPL4P36517 319 aa3.34□□□□□ -1.87
MSM1YGR171C ADH5P38113 351 aaKnown RBP3.34□□□□□ -1.87
MSM1YGR171C EFM2P38347 419 aa3.34□□□□□ -1.87
MSM1YGR171C YIL152WP40455 235 aa3.34□□□□□ -1.87
MSM1YGR171C CSM2P40465 213 aa3.34□□□□□ -1.87
MSM1YGR171C SAS2P40963 338 aa3.34□□□□□ -1.87
MSM1YGR171C AGX1P43567 385 aa3.34□□□□□ -1.87
MSM1YGR171C KEL2P50090 882 aa3.34□□□□□ -1.87
MSM1YGR171C LSC1P53598 329 aaKnown RBP3.34□□□□□ -1.87
MSM1YGR171C PRO2P54885 456 aaKnown RBP3.34□□□□□ -1.87
MSM1YGR171C SNA4Q07549 140 aa3.34□□□□□ -1.87
MSM1YGR171C BSC1Q12140 328 aa3.34□□□□□ -1.87
MSM1YGR171C SCEIP03882 235 aa3.33□□□□□ -1.88
MSM1YGR171C DAP2P18962 818 aa3.33□□□□□ -1.88
MSM1YGR171C DBP3P20447 523 aaKnown RBP3.33□□□□□ -1.88
MSM1YGR171C PPZ1P26570 692 aa3.33□□□□□ -1.88
MSM1YGR171C RAD24P32641 659 aa3.33□□□□□ -1.88
MSM1YGR171C SPC34P36131 295 aa3.33□□□□□ -1.88
MSM1YGR171C RRN10P38204 145 aa3.33□□□□□ -1.88
MSM1YGR171C ARC40P38328 384 aaKnown RBP3.33□□□□□ -1.88
MSM1YGR171C RRP3P38712 501 aaKnown RBP3.33□□□□□ -1.88
MSM1YGR171C OSH3P38713 996 aaKnown RBP3.33□□□□□ -1.88
MSM1YGR171C MLH1P38920 769 aa3.33□□□□□ -1.88
MSM1YGR171C FAU1P40099 211 aa3.33□□□□□ -1.88
MSM1YGR171C SCD6P45978 349 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88 RIP-Chip
MSM1YGR171C RRP46P53256 223 aaPredicted RBP3.33□□□□□ -1.88
MSM1YGR171C YIF1P53845 314 aaKnown RBP3.33□□□□□ -1.88
MSM1YGR171C DIG1Q03063 452 aaKnown RBP3.33□□□□□ -1.88
MSM1YGR171C MSS11Q03825 758 aa3.33□□□□□ -1.88
MSM1YGR171C YDR387CQ04162 555 aa3.33□□□□□ -1.88
MSM1YGR171C YLR413WQ06689 675 aa3.33□□□□□ -1.88
MSM1YGR171C THI20Q08224 551 aa3.33□□□□□ -1.88
MSM1YGR171C NRT1Q08485 598 aa3.33□□□□□ -1.88
MSM1YGR171C BUG1Q12191 341 aa3.33□□□□□ -1.88
MSM1YGR171C RAD61Q99359 647 aa3.33□□□□□ -1.88
MSM1YGR171C SAM1P10659 382 aaKnown RBP3.33□□□□□ -1.88
MSM1YGR171C BUB3P26449 341 aa3.33□□□□□ -1.88
MSM1YGR171C SOR1P35497 357 aaKnown RBP3.33□□□□□ -1.88
MSM1YGR171C YBL028CP38202 106 aa3.33□□□□□ -1.88
MSM1YGR171C HSM3P38348 480 aa3.33□□□□□ -1.88
MSM1YGR171C PCA1P38360 1216 aa3.33□□□□□ -1.88
MSM1YGR171C PIB2P53191 635 aa3.33□□□□□ -1.88
MSM1YGR171C YLR281CQ05863 155 aa3.33□□□□□ -1.88
MSM1YGR171C YPR172WQ06608 200 aa3.33□□□□□ -1.88
MSM1YGR171C SOR2Q07786 357 aa3.33□□□□□ -1.88
MSM1YGR171C LSP1Q12230 341 aaKnown RBP3.33□□□□□ -1.88
MSM1YGR171C RKM5Q12367 367 aa3.33□□□□□ -1.88
MSM1YGR171C COX3P00420 269 aa3.32□□□□□ -1.88
MSM1YGR171C ADE4P04046 510 aaKnown RBP3.32□□□□□ -1.88
MSM1YGR171C EXO70P19658 623 aa3.32□□□□□ -1.88
MSM1YGR171C HNM1P19807 563 aa3.32□□□□□ -1.88
MSM1YGR171C RPI1P23250 407 aaKnown RBP3.32□□□□□ -1.88
MSM1YGR171C FAA1P30624 700 aaKnown RBP3.32□□□□□ -1.88
MSM1YGR171C ACH1P32316 526 aa3.32□□□□□ -1.88
MSM1YGR171C MRP4P32902 394 aa3.32□□□□□ -1.88
MSM1YGR171C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
MSM1YGR171C OLA1P38219 394 aaKnown RBP3.32□□□□□ -1.88
MSM1YGR171C SSO2P39926 295 aa3.32□□□□□ -1.88
MSM1YGR171C YIL169CP40442 995 aa3.32□□□□□ -1.88
MSM1YGR171C AZF1P41696 914 aa3.32□□□□□ -1.88
MSM1YGR171C TDA7P53882 636 aaPredicted RBP3.32□□□□□ -1.88
MSM1YGR171C MPS1P54199 764 aa3.32□□□□□ -1.88
MSM1YGR171C YEH2Q07950 538 aa3.32□□□□□ -1.88
MSM1YGR171C SRL1Q08673 210 aa3.32□□□□□ -1.88
MSM1YGR171C CHD1P32657 1468 aa3.32□□□□□ -1.88
MSM1YGR171C CBP2P03874 630 aaPredicted RBP3.31□□□□□ -1.88
MSM1YGR171C SUP35P05453 685 aaKnown RBP3.31□□□□□ -1.88
MSM1YGR171C ILV5P06168 395 aaKnown RBP3.31□□□□□ -1.88
MSM1YGR171C ALG1P16661 449 aa3.31□□□□□ -1.88
MSM1YGR171C SEC62P21825 274 aa3.31□□□□□ -1.88
MSM1YGR171C UBA1P22515 1024 aaKnown RBP3.31□□□□□ -1.88
MSM1YGR171C CRM1P30822 1084 aaKnown RBP3.31□□□□□ -1.88
MSM1YGR171C SPC110P32380 944 aa3.31□□□□□ -1.88
MSM1YGR171C APE2P32454 952 aaKnown RBP3.31□□□□□ -1.88
MSM1YGR171C ECM15P35195 104 aa3.31□□□□□ -1.88
MSM1YGR171C MET30P39014 640 aa3.31□□□□□ -1.88
MSM1YGR171C YIR014WP40570 242 aa3.31□□□□□ -1.88
MSM1YGR171C GCD10P41814 478 aa3.31□□□□□ -1.88
MSM1YGR171C YFR018CP43599 363 aa3.31□□□□□ -1.88
MSM1YGR171C TRS85P46944 698 aa3.31□□□□□ -1.88
MSM1YGR171C PHO86P46956 311 aa3.31□□□□□ -1.88
MSM1YGR171C EMC2P47133 292 aaKnown RBP3.31□□□□□ -1.88
MSM1YGR171C YNL143CP53908 130 aa3.31□□□□□ -1.88
MSM1YGR171C YPL068CQ02749 293 aa3.31□□□□□ -1.88
MSM1YGR171C FMP42Q04991 504 aa3.31□□□□□ -1.88
MSM1YGR171C BNA5Q05979 453 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms