RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W ARV1Q06541 321 aa3.56□□□□□ -1.84
SPT6YGR116W LDB18Q07887 179 aa3.56□□□□□ -1.84
SPT6YGR116W FMP40Q08968 688 aaPredicted RBP3.56□□□□□ -1.84
SPT6YGR116W YOR289WQ12012 251 aaPredicted RBP3.56□□□□□ -1.84
SPT6YGR116W MLH3Q12083 715 aa3.56□□□□□ -1.84
SPT6YGR116W RPL4AP10664 362 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W SAM35P14693 329 aa3.56□□□□□ -1.84
SPT6YGR116W RER1P25560 188 aa3.56□□□□□ -1.84
SPT6YGR116W REG2P38232 338 aa3.56□□□□□ -1.84
SPT6YGR116W MSC7P38694 644 aa3.56□□□□□ -1.84
SPT6YGR116W EFM1P38732 585 aa3.56□□□□□ -1.84
SPT6YGR116W AFG3P39925 761 aa3.56□□□□□ -1.84
SPT6YGR116W JHD2P47156 728 aaPredicted RBP3.56□□□□□ -1.84
SPT6YGR116W RPL4BP49626 362 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W MPS1P54199 764 aa3.56□□□□□ -1.84
SPT6YGR116W RRT8Q08219 342 aa3.56□□□□□ -1.84
SPT6YGR116W MCA1Q08601 432 aa3.56□□□□□ -1.84
SPT6YGR116W RRG7Q08774 242 aaPredicted RBP3.56□□□□□ -1.84
SPT6YGR116W YRM1Q12340 786 aa3.56□□□□□ -1.84
SPT6YGR116W REP2P03872 296 aa3.56□□□□□ -1.84
SPT6YGR116W PET54P10834 293 aa3.56□□□□□ -1.84
SPT6YGR116W MF(ALPHA)2P32435 120 aa3.56□□□□□ -1.84
SPT6YGR116W SEA4P38164 1038 aa3.56□□□□□ -1.84
SPT6YGR116W FUI1P38196 639 aa3.56□□□□□ -1.84
SPT6YGR116W YBR137WP38276 179 aa3.56□□□□□ -1.84
SPT6YGR116W DHH1P39517 506 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W GDI1P39958 451 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W HPA3P39979 161 aa3.56□□□□□ -1.84
SPT6YGR116W QDR1P40475 563 aa3.56□□□□□ -1.84
SPT6YGR116W ERG10P41338 398 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W TIM54P47045 478 aa3.56□□□□□ -1.84
SPT6YGR116W GND2P53319 492 aa3.56□□□□□ -1.84
SPT6YGR116W MKC7P53379 596 aa3.56□□□□□ -1.84
SPT6YGR116W KTR6P54070 446 aa3.56□□□□□ -1.84
SPT6YGR116W CEG1Q01159 459 aaPredicted RBP3.56□□□□□ -1.84
SPT6YGR116W RVB1Q03940 463 aaKnown RBP3.56□□□□□ -1.84
SPT6YGR116W BUR2Q05949 395 aa3.56□□□□□ -1.84
SPT6YGR116W RIF2Q06208 395 aa3.56□□□□□ -1.84
SPT6YGR116W AEP3Q12089 606 aa3.56□□□□□ -1.84
SPT6YGR116W SFM1Q12314 213 aa3.56□□□□□ -1.84
SPT6YGR116W ATP14Q12349 124 aa3.56□□□□□ -1.84
SPT6YGR116W ZPS1Q12512 249 aa3.56□□□□□ -1.84
SPT6YGR116W Q0010Q9ZZX9 128 aa3.56□□□□□ -1.84
SPT6YGR116W RPS17AP02407 136 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W CHS1P08004 1131 aa3.55□□□□□ -1.84
SPT6YGR116W RPS17BP14127 136 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W TFS1P14306 219 aa3.55□□□□□ -1.84
SPT6YGR116W SYP1P25623 870 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W MRT4P33201 236 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W MRPL36P36531 177 aa3.55□□□□□ -1.84
SPT6YGR116W YCR087C-AP37263 153 aa3.55□□□□□ -1.84
SPT6YGR116W YHR035WP38769 630 aa3.55□□□□□ -1.84
SPT6YGR116W NSG1P38837 291 aa3.55□□□□□ -1.84
SPT6YGR116W RGI2P40188 164 aa3.55□□□□□ -1.84
SPT6YGR116W ARF3P40994 183 aaRIP-Chip data3.55□□□□□ -1.84not detected
SPT6YGR116W LOH1P47055 219 aa3.55□□□□□ -1.84
SPT6YGR116W ATH1P48016 1211 aa3.55□□□□□ -1.84
SPT6YGR116W NBP35P52920 328 aa3.55□□□□□ -1.84
SPT6YGR116W MTC3P53077 123 aa3.55□□□□□ -1.84
SPT6YGR116W BRE5P53741 515 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W TIF35Q04067 274 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W YDR124WQ04608 324 aa3.55□□□□□ -1.84
SPT6YGR116W YLR446WQ06204 433 aa3.55□□□□□ -1.84
SPT6YGR116W PHO92Q06390 306 aa3.55□□□□□ -1.84
SPT6YGR116W YLR126CQ12288 251 aa3.55□□□□□ -1.84
SPT6YGR116W HXK2P04807 486 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W TKL1P23254 680 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W YCK1P23291 538 aa3.55□□□□□ -1.84
SPT6YGR116W STE14P32584 239 aa3.55□□□□□ -1.84
SPT6YGR116W PDC2P32896 925 aa3.55□□□□□ -1.84
SPT6YGR116W SDH3P33421 198 aa3.55□□□□□ -1.84
SPT6YGR116W APL3P38065 1025 aa3.55□□□□□ -1.84
SPT6YGR116W GIC1P38785 314 aa3.55□□□□□ -1.84
SPT6YGR116W AIM2P39721 246 aa3.55□□□□□ -1.84
SPT6YGR116W VAB2P40003 282 aa3.55□□□□□ -1.84
SPT6YGR116W EMP65P40085 556 aa3.55□□□□□ -1.84
SPT6YGR116W RRG9P40156 214 aa3.55□□□□□ -1.84
SPT6YGR116W NIT1P40447 199 aa3.55□□□□□ -1.84
SPT6YGR116W PTR3P43606 678 aa3.55□□□□□ -1.84
SPT6YGR116W PET130P47065 347 aa3.55□□□□□ -1.84
SPT6YGR116W GOR1P53839 350 aa3.55□□□□□ -1.84
SPT6YGR116W GSF2Q04697 403 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W YLR257WQ06146 321 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W GPB1Q08886 897 aa3.55□□□□□ -1.84
SPT6YGR116W YOR131CQ12486 218 aa3.55□□□□□ -1.84
SPT6YGR116W FUS1P11710 512 aa3.55□□□□□ -1.84
SPT6YGR116W RRP7P25368 297 aaPredicted RBP3.55□□□□□ -1.84
SPT6YGR116W TAH1P25638 111 aaPredicted RBP3.55□□□□□ -1.84
SPT6YGR116W HOM6P31116 359 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W KRE6P32486 720 aa3.55□□□□□ -1.84
SPT6YGR116W ISC10P32645 267 aa3.55□□□□□ -1.84
SPT6YGR116W WBP1P33767 430 aaKnown RBP3.55□□□□□ -1.84
SPT6YGR116W ERV46P39727 415 aa3.55□□□□□ -1.84
SPT6YGR116W KTR7P40504 517 aa3.55□□□□□ -1.84
SPT6YGR116W GDS1P41913 522 aa3.55□□□□□ -1.84
SPT6YGR116W SKP2P42843 763 aa3.55□□□□□ -1.84
SPT6YGR116W AAD14P42884 376 aa3.55□□□□□ -1.84
SPT6YGR116W NUP85P46673 744 aa3.55□□□□□ -1.84
SPT6YGR116W AIM22P47051 409 aa3.55□□□□□ -1.84
SPT6YGR116W ISM1P48526 1002 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 83.3 ms