RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA8, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA8	YEL051W	GAL80	P04387	435 aa		3	□□□□□ -1.93
VMA8	YEL051W	SNF3	P10870	884 aa		3	□□□□□ -1.93
VMA8	YEL051W	YAK1	P14680	807 aa		3	□□□□□ -1.93
VMA8	YEL051W	PRP16	P15938	1071 aa	Predicted RBP	3	□□□□□ -1.93
VMA8	YEL051W	GLN3	P18494	730 aa		3	□□□□□ -1.93
VMA8	YEL051W	PUP3	P25451	205 aa	Known RBP	3	□□□□□ -1.93
VMA8	YEL051W	RDS1	P25611	832 aa		3	□□□□□ -1.93
VMA8	YEL051W	GPI10	P30777	616 aa		3	□□□□□ -1.93
VMA8	YEL051W	RPL32	P38061	130 aa	Known RBP	3	□□□□□ -1.93
VMA8	YEL051W	ATP3	P38077	311 aa	Known RBP	3	□□□□□ -1.93
VMA8	YEL051W	MMS4	P38257	691 aa		3	□□□□□ -1.93
VMA8	YEL051W	MNL1	P38888	796 aa		3	□□□□□ -1.93
VMA8	YEL051W	CIN4	P39110	191 aa		3	□□□□□ -1.93
VMA8	YEL051W	PHO90	P39535	881 aa		3	□□□□□ -1.93
VMA8	YEL051W	GIM4	P40005	111 aa	Known RBP	3	□□□□□ -1.93
VMA8	YEL051W	IRC6	P43615	237 aa		3	□□□□□ -1.93
VMA8	YEL051W	ERG26	P53199	349 aa	Known RBP	3	□□□□□ -1.93
VMA8	YEL051W	YGR066C	P53242	292 aa		3	□□□□□ -1.93
VMA8	YEL051W	CAF130	P53280	1122 aa	Predicted RBP	3	□□□□□ -1.93
VMA8	YEL051W	OGG1	P53397	376 aa	Predicted RBP	3	□□□□□ -1.93
VMA8	YEL051W	EOS1	P53938	366 aa		3	□□□□□ -1.93
VMA8	YEL051W	NUP100	Q02629	959 aa		3	□□□□□ -1.93
VMA8	YEL051W	YPL107W	Q02873	248 aa		3	□□□□□ -1.93
VMA8	YEL051W	RMT2	Q03305	412 aa		3	□□□□□ -1.93
VMA8	YEL051W	ARO80	Q04052	950 aa		3	□□□□□ -1.93
VMA8	YEL051W	DYN3	Q04949	312 aa		3	□□□□□ -1.93
VMA8	YEL051W	KAP95	Q06142	861 aa	Known RBP	3	□□□□□ -1.93
VMA8	YEL051W	GMC2	Q06201	188 aa		3	□□□□□ -1.93
VMA8	YEL051W	BCP1	Q06338	283 aa		3	□□□□□ -1.93
VMA8	YEL051W	CMS1	Q07897	291 aa	Known RBP	3	□□□□□ -1.93
VMA8	YEL051W	ABP140	Q08641	628 aa	Known RBP	3	□□□□□ -1.93
VMA8	YEL051W	RPS10A	Q08745	105 aa	Predicted RBP	3	□□□□□ -1.93
VMA8	YEL051W	RBD2	Q12270	262 aa		3	□□□□□ -1.93
VMA8	YEL051W	GIS3	Q12418	502 aa		3	□□□□□ -1.93
VMA8	YEL051W	CSR2	Q12734	1121 aa		3	□□□□□ -1.93
VMA8	YEL051W	LAG2	Q92325	660 aa		3	□□□□□ -1.93
VMA8	YEL051W	TDH1	P00360	332 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	PDA1	P16387	420 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	ART10	P18634	518 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	DAL81	P21657	970 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	KRE2	P27809	442 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	SYN8	P31377	255 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	VMA6	P32366	345 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	SUA5	P32579	426 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	GYP6	P32806	458 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	SUR1	P33300	382 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	RRP1	P35178	278 aa	Predicted RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	TCD2	P36101	447 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	VPS51	P36116	164 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	ROT2	P38138	954 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	ERG7	P38604	731 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	ARP1	P38696	384 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	CCT6	P39079	546 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	YEL057C	P39983	233 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	THO1	P40040	218 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	AZF1	P41696	914 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	RPS10B	P46784	105 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	HSH155	P49955	971 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	IMD4	P50094	524 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	PIB2	P53191	635 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	ART5	P53244	586 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	VAC7	P53950	1165 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	YVH1	Q02256	364 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	RLI1	Q03195	608 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	UBX2	Q04228	584 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	RPC11	Q04307	110 aa	Predicted RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	SPC24	Q04477	213 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	YLR456W	Q06199	204 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	SYO1	Q07395	620 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	YDL114W	Q07530	308 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
VMA8	YEL051W	TLG2	Q08144	397 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	RDR1	Q08904	546 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	DDC1	Q08949	612 aa		2.99	□□□□□ -1.93
VMA8	YEL051W	PDH1	Q12428	516 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	TOP2	P06786	1428 aa	Known RBP	2.99	□□□□□ -1.93
VMA8	YEL051W	RPO31	P04051	1460 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	JIP3	O13555	125 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	CDC36	P06100	191 aa	Predicted RBP	2.98	□□□□□ -1.93
VMA8	YEL051W	HIS3	P06633	220 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
VMA8	YEL051W	DSF1	P0CX08	502 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	YNR073C	P0CX09	502 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	UTR1	P21373	530 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	CMK2	P22517	447 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	CLB1	P24868	471 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
VMA8	YEL051W	ATP11	P32453	318 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	COT1	P32798	439 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	YBL055C	P34220	418 aa	Predicted RBP	2.98	□□□□□ -1.93
VMA8	YEL051W	CAF4	P36130	643 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	SRL3	P36167	246 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	MRPL37	P36532	105 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	APE3	P37302	537 aa	Known RBP	2.98	□□□□□ -1.93
VMA8	YEL051W	PCH2	P38126	564 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	CHK1	P38147	527 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	KAP104	P38217	918 aa	Known RBP	2.98	□□□□□ -1.93
VMA8	YEL051W	CST26	P38226	397 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	YBR242W	P38331	238 aa		2.98	□□□□□ -1.93
VMA8	YEL051W	YAP3	P38749	330 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms