RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	SWF1	Q04629	336 aa		11.9	□□□□□ -0.5
NPL3	YDR432W	RQC1	Q05468	723 aa	Known RBP	11.9	□□□□□ -0.5
NPL3	YDR432W	GET4	Q12125	312 aa		11.9	□□□□□ -0.5
NPL3	YDR432W	RRP36	Q12481	300 aa	Predicted RBP	11.9	□□□□□ -0.5
NPL3	YDR432W	PRP4	P20053	465 aa	Known RBP	11.89	□□□□□ -0.51
NPL3	YDR432W	BUB2	P26448	306 aa	Predicted RBP	11.89	□□□□□ -0.51
NPL3	YDR432W	PTC1	P35182	281 aa		11.89	□□□□□ -0.51
NPL3	YDR432W	IFA38	P38286	347 aa		11.89	□□□□□ -0.51
NPL3	YDR432W	GPI16	P38875	610 aa		11.89	□□□□□ -0.51
NPL3	YDR432W	SPT20	P50875	604 aa		11.89	□□□□□ -0.51
NPL3	YDR432W	YNL010W	P53981	241 aa	Known RBP	11.89	□□□□□ -0.51
NPL3	YDR432W	YMR111C	Q04461	462 aa	Predicted RBP	11.89	□□□□□ -0.51
NPL3	YDR432W	GLO2	Q05584	274 aa		11.89	□□□□□ -0.51
NPL3	YDR432W	FAR10	Q06001	478 aa		11.89	□□□□□ -0.51
NPL3	YDR432W	YPR174C	Q06616	221 aa	Predicted RBP	11.89	□□□□□ -0.51
NPL3	YDR432W	ESA1	Q08649	445 aa		11.89	□□□□□ -0.51
NPL3	YDR432W	MCH5	Q08777	521 aa		11.89	□□□□□ -0.51
NPL3	YDR432W	PAR32	Q12515	295 aa	Known RBP	11.89	□□□□□ -0.51
NPL3	YDR432W	UTP20	P35194	2493 aa	Known RBP	11.89	□□□□□ -0.51
NPL3	YDR432W	AI1	P03875	834 aa		11.88	□□□□□ -0.51
NPL3	YDR432W	HXK2	P04807	486 aa	Known RBP	11.88	□□□□□ -0.51
NPL3	YDR432W	APN1	P22936	367 aa		11.88	□□□□□ -0.51
NPL3	YDR432W	GRR1	P24814	1151 aa		11.88	□□□□□ -0.51
NPL3	YDR432W	SLM5	P25345	492 aa	Known RBP	11.88	□□□□□ -0.51
NPL3	YDR432W	OCA4	P25366	362 aa		11.88	□□□□□ -0.51
NPL3	YDR432W	SPC42	P36094	363 aa		11.88	□□□□□ -0.51
NPL3	YDR432W	RFC3	P38629	340 aa		11.88	□□□□□ -0.51
NPL3	YDR432W	MET18	P40469	1032 aa		11.88	□□□□□ -0.51
NPL3	YDR432W	AIM22	P47051	409 aa		11.88	□□□□□ -0.51
NPL3	YDR432W	CUS2	P53830	285 aa	Predicted RBP	11.88	□□□□□ -0.51
NPL3	YDR432W	EXO70	P19658	623 aa		11.87	□□□□□ -0.51
NPL3	YDR432W	SPO23	P33757	523 aa		11.87	□□□□□ -0.51
NPL3	YDR432W	UTP25	P40498	721 aa	Known RBP	11.87	□□□□□ -0.51
NPL3	YDR432W	MAL11	P53048	616 aa		11.87	□□□□□ -0.51
NPL3	YDR432W	REC102	Q02721	264 aa		11.87	□□□□□ -0.51
NPL3	YDR432W	IRC15	Q02733	499 aa		11.87	□□□□□ -0.51
NPL3	YDR432W	ISR1	Q06098	443 aa	Known RBP	11.87	□□□□□ -0.51
NPL3	YDR432W	YEH2	Q07950	538 aa		11.87	□□□□□ -0.51
NPL3	YDR432W	NTO1	Q12311	748 aa		11.87	□□□□□ -0.51
NPL3	YDR432W	CAR1	P00812	333 aa	Known RBP	11.86	□□□□□ -0.51
NPL3	YDR432W	SLY41	P22215	453 aa		11.86	□□□□□ -0.51
NPL3	YDR432W	GFD2	P25370	566 aa	Known RBP	11.86	□□□□□ -0.51
NPL3	YDR432W	STP22	P25604	385 aa		11.86	□□□□□ -0.51
NPL3	YDR432W	SIP2	P34164	415 aa	Known RBP	11.86	□□□□□ -0.51
NPL3	YDR432W	PSA1	P41940	361 aa	Known RBP	11.86	□□□□□ -0.51
NPL3	YDR432W	FMN1	Q03778	218 aa		11.86	□□□□□ -0.51
NPL3	YDR432W	CYK3	Q07533	885 aa		11.86	□□□□□ -0.51
NPL3	YDR432W	SLF1	Q12034	447 aa	Known RBP	11.86	□□□□□ -0.51
NPL3	YDR432W	YOR032W-A	Q8TGS1	66 aa		11.86	□□□□□ -0.51
NPL3	YDR432W	DST1	P07273	309 aa		11.85	□□□□□ -0.51
NPL3	YDR432W	CBS2	P14905	389 aa		11.85	□□□□□ -0.51
NPL3	YDR432W	NUD1	P32336	851 aa		11.85	□□□□□ -0.51
NPL3	YDR432W	MNN2	P38069	597 aa		11.85	□□□□□ -0.51
NPL3	YDR432W	YBL029W	P38201	376 aa		11.85	□□□□□ -0.51
NPL3	YDR432W	YEL020C	P39994	560 aa		11.85	□□□□□ -0.51
NPL3	YDR432W	MEP2	P41948	499 aa		11.85	□□□□□ -0.51
NPL3	YDR432W	NAS6	P50086	228 aa		11.85	□□□□□ -0.51
NPL3	YDR432W	LGE1	Q02796	332 aa	Known RBP	11.85	□□□□□ -0.51
NPL3	YDR432W	YTM1	Q12024	460 aa	Predicted RBP	11.85	□□□□□ -0.51
NPL3	YDR432W	ATG34	Q12292	412 aa		11.85	□□□□□ -0.51
NPL3	YDR432W	GLT1	Q12680	2145 aa	Known RBP	11.85	□□□□□ -0.51
NPL3	YDR432W	IDH2	P28241	369 aa	Known RBP	11.84	□□□□□ -0.51
NPL3	YDR432W	RAD14	P28519	371 aa		11.84	□□□□□ -0.51
NPL3	YDR432W	TOA1	P32773	286 aa		11.84	□□□□□ -0.51
NPL3	YDR432W	OM14	P38325	134 aa		11.84	□□□□□ -0.51
NPL3	YDR432W	ATG7	P38862	630 aa		11.84	□□□□□ -0.51
NPL3	YDR432W	DSS1	P39112	969 aa		11.84	□□□□□ -0.51
NPL3	YDR432W	TPA1	P40032	644 aa	Known RBP	11.84	□□□□□ -0.51
NPL3	YDR432W	UBP2	Q01476	1272 aa		11.84	□□□□□ -0.51
NPL3	YDR432W	DIA2	Q08496	732 aa	Predicted RBP	11.84	□□□□□ -0.51
NPL3	YDR432W	MLH3	Q12083	715 aa		11.84	□□□□□ -0.51
NPL3	YDR432W	YDL177C	Q12257	170 aa		11.84	□□□□□ -0.51
NPL3	YDR432W	RPB10	P22139	70 aa		11.83	□□□□□ -0.52
NPL3	YDR432W	DBR1	P24309	405 aa	Known RBP	11.83	□□□□□ -0.52
NPL3	YDR432W	YEN1	P40028	759 aa		11.83	□□□□□ -0.52
NPL3	YDR432W	FMP32	P43557	207 aa		11.83	□□□□□ -0.52
NPL3	YDR432W	MDV1	P47025	714 aa		11.83	□□□□□ -0.52
NPL3	YDR432W	YJR115W	P47152	169 aa		11.83	□□□□□ -0.52
NPL3	YDR432W	ROM1	P53046	1155 aa		11.83	□□□□□ -0.52
NPL3	YDR432W	YGR067C	P53243	804 aa		11.83	□□□□□ -0.52
NPL3	YDR432W	IDP3	P53982	420 aa	Known RBP	11.83	□□□□□ -0.52
NPL3	YDR432W	YPL071C	Q02864	156 aa		11.83	□□□□□ -0.52
NPL3	YDR432W	ECM11	Q04110	302 aa		11.83	□□□□□ -0.52
NPL3	YDR432W	YOR019W	Q99248	730 aa		11.83	□□□□□ -0.52
NPL3	YDR432W	SYP1	P25623	870 aa	Known RBP	11.82	□□□□□ -0.52
NPL3	YDR432W	SNO3	P43544	222 aa		11.82	□□□□□ -0.52
NPL3	YDR432W	PTR3	P43606	678 aa		11.82	□□□□□ -0.52
NPL3	YDR432W	UPF3	P48412	387 aa	Known RBP	11.82	□□□□□ -0.52
NPL3	YDR432W	USE1	P53146	245 aa		11.82	□□□□□ -0.52
NPL3	YDR432W	MSC1	Q03104	513 aa		11.82	□□□□□ -0.52
NPL3	YDR432W	YDR124W	Q04608	324 aa		11.82	□□□□□ -0.52
NPL3	YDR432W	MDM32	Q12171	622 aa		11.82	□□□□□ -0.52
NPL3	YDR432W	YSF3	P0C074	85 aa	Predicted RBP	11.81	□□□□□ -0.52
NPL3	YDR432W	ARE1	P25628	610 aa		11.81	□□□□□ -0.52
NPL3	YDR432W	CAF4	P36130	643 aa		11.81	□□□□□ -0.52
NPL3	YDR432W	BET3	P36149	193 aa		11.81	□□□□□ -0.52
NPL3	YDR432W	ARN1	P38731	627 aa		11.81	□□□□□ -0.52
NPL3	YDR432W	RPS26A	P39938	119 aa	Known RBP	11.81	□□□□□ -0.52
NPL3	YDR432W	RPS26B	P39939	119 aa	Known RBP	11.81	□□□□□ -0.52
NPL3	YDR432W	ALB1	P47019	175 aa	Predicted RBP	11.81	□□□□□ -0.52

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms