RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W RAD17P48581 401 aa1.31□□□□□ -2.2
MSN5YDR335W GTR2P53290 341 aa1.31□□□□□ -2.2
MSN5YDR335W YNL247WP53852 767 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W ASI2P53895 289 aa1.31□□□□□ -2.2
MSN5YDR335W MYO5Q04439 1219 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W SMD2Q06217 110 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W CTS2Q06350 511 aa1.31□□□□□ -2.2
MSN5YDR335W YDL086WQ07505 273 aa1.31□□□□□ -2.2
MSN5YDR335W YFH1Q07540 174 aa1.31□□□□□ -2.2
MSN5YDR335W UAF30Q08747 228 aa1.31□□□□□ -2.2
MSN5YDR335W SAM4Q08985 325 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W ISN1Q99312 450 aa1.31□□□□□ -2.2
MSN5YDR335W AI5_BETAQ9ZZX0 354 aa1.31□□□□□ -2.2
MSN5YDR335W FAS2P19097 1887 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W CAR1P00812 333 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W GPH1P06738 902 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W DST1P07273 309 aa1.3□□□□□ -2.2
MSN5YDR335W KRS1P15180 591 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W PRP6P19735 899 aaPredicted RBP1.3□□□□□ -2.2
MSN5YDR335W PRE10P21242 288 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
MSN5YDR335W HXT2P23585 541 aa1.3□□□□□ -2.2
MSN5YDR335W DCG1P32460 244 aa1.3□□□□□ -2.2
MSN5YDR335W HIR2P32480 875 aa1.3□□□□□ -2.2
MSN5YDR335W TMT1P32643 299 aa1.3□□□□□ -2.2
MSN5YDR335W CYM1P32898 989 aa1.3□□□□□ -2.2
MSN5YDR335W OCT1P35999 772 aa1.3□□□□□ -2.2
MSN5YDR335W MTC6P38849 526 aa1.3□□□□□ -2.2
MSN5YDR335W SPC97P38863 823 aa1.3□□□□□ -2.2
MSN5YDR335W PRP39P39682 629 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W YER079WP40052 210 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W STB2P46679 850 aa1.3□□□□□ -2.2
MSN5YDR335W YDL183CP48569 320 aa1.3□□□□□ -2.2
MSN5YDR335W ASN2P49090 572 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W HOP2P53187 214 aa1.3□□□□□ -2.2
MSN5YDR335W IMO32P53219 342 aa1.3□□□□□ -2.2
MSN5YDR335W YGR127WP53275 312 aa1.3□□□□□ -2.2
MSN5YDR335W MRPL50P53724 139 aa1.3□□□□□ -2.2
MSN5YDR335W YDR209CQ03480 137 aa1.3□□□□□ -2.2
MSN5YDR335W UFO1Q04511 668 aa1.3□□□□□ -2.2
MSN5YDR335W MCM21Q06675 368 aa1.3□□□□□ -2.2
MSN5YDR335W YPR078CQ06813 372 aa1.3□□□□□ -2.2
MSN5YDR335W ACK1Q07622 623 aaPredicted RBP1.3□□□□□ -2.2
MSN5YDR335W RKM1Q08961 583 aaPredicted RBP1.3□□□□□ -2.2
MSN5YDR335W USV1Q12132 391 aa1.3□□□□□ -2.2
MSN5YDR335W SSA3P09435 649 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W MATALPHA1P0CY06 175 aa1.3□□□□□ -2.2
MSN5YDR335W HMLALPHA1P0CY07 175 aa1.3□□□□□ -2.2
MSN5YDR335W PRP16P15938 1071 aaPredicted RBP1.3□□□□□ -2.2
MSN5YDR335W CLC1P17891 233 aa1.3□□□□□ -2.2
MSN5YDR335W CKA2P19454 339 aa1.3□□□□□ -2.2
MSN5YDR335W HCM1P25364 564 aa1.3□□□□□ -2.2
MSN5YDR335W POP5P28005 173 aa1.3□□□□□ -2.2
MSN5YDR335W HXT1P32465 570 aa1.3□□□□□ -2.2
MSN5YDR335W REC114P32841 428 aa1.3□□□□□ -2.2
MSN5YDR335W IMP3P32899 183 aaPredicted RBP1.3□□□□□ -2.2
MSN5YDR335W WBP1P33767 430 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W CBT1P36038 271 aaPredicted RBP1.3□□□□□ -2.2
MSN5YDR335W GMH1P36125 273 aa1.3□□□□□ -2.2
MSN5YDR335W CIN1P40987 1014 aa1.3□□□□□ -2.2
MSN5YDR335W IAH1P41734 238 aa1.3□□□□□ -2.2
MSN5YDR335W YRB1P41920 201 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W BUL1P48524 976 aa1.3□□□□□ -2.2
MSN5YDR335W MUP1P50276 574 aa1.3□□□□□ -2.2
MSN5YDR335W RIB4P50861 169 aaPredicted RBP1.3□□□□□ -2.2
MSN5YDR335W RTC4P53850 401 aa1.3□□□□□ -2.2
MSN5YDR335W ESBP6P53918 673 aa1.3□□□□□ -2.2
MSN5YDR335W UTP6Q02354 440 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W GIP3Q03016 1276 aa1.3□□□□□ -2.2
MSN5YDR335W RQC1Q05468 723 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W COQ9Q05779 260 aa1.3□□□□□ -2.2
MSN5YDR335W COQ11Q05892 277 aa1.3□□□□□ -2.2
MSN5YDR335W VPS74Q06385 345 aa1.3□□□□□ -2.2
MSN5YDR335W DIB1Q06819 143 aaPredicted RBP1.3□□□□□ -2.2
MSN5YDR335W ETT1Q08421 412 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W GPN2Q08726 347 aaPredicted RBP1.3□□□□□ -2.2
MSN5YDR335W GRE1Q08969 168 aa1.3□□□□□ -2.2
MSN5YDR335W SET6Q12529 373 aa1.3□□□□□ -2.2
MSN5YDR335W SRB8P25648 1427 aa1.3□□□□□ -2.2
MSN5YDR335W RTC1Q08281 1341 aa1.3□□□□□ -2.2
MSN5YDR335W SPS4P09937 338 aa1.3□□□□□ -2.2
MSN5YDR335W RNR2P09938 399 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W NFT1P0CE68 1218 aa1.3□□□□□ -2.2
MSN5YDR335W YML003WP0CF16 290 aa1.3□□□□□ -2.2
MSN5YDR335W MAS1P10507 462 aa1.3□□□□□ -2.2
MSN5YDR335W ALG1P16661 449 aa1.3□□□□□ -2.2
MSN5YDR335W SAR1P20606 190 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W GPI12P23797 304 aa1.3□□□□□ -2.2
MSN5YDR335W LAC1P28496 418 aa1.3□□□□□ -2.2
MSN5YDR335W ARO4P32449 370 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W CYS4P32582 507 aaKnown RBP1.3□□□□□ -2.2
MSN5YDR335W NRP1P32770 719 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
MSN5YDR335W ECT1P33412 323 aa1.3□□□□□ -2.2
MSN5YDR335W YPT53P36019 220 aa1.3□□□□□ -2.2
MSN5YDR335W YKR015CP36111 568 aa1.3□□□□□ -2.2
MSN5YDR335W UBA4P38820 440 aa1.3□□□□□ -2.2
MSN5YDR335W CTF8P38877 133 aa1.3□□□□□ -2.2
MSN5YDR335W RCY1P39531 840 aa1.3□□□□□ -2.2
MSN5YDR335W ATM1P40416 690 aa1.3□□□□□ -2.2
MSN5YDR335W IBA57P47158 497 aa1.3□□□□□ -2.2
MSN5YDR335W PUS4P48567 403 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms