RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	YBR085C-A	O43137	85 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
SEC1	YDR164C	ARD1	P07347	238 aa	Predicted RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	SNF3	P10870	884 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	APE1	P14904	514 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	NSP1	P14907	823 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	SRV2	P17555	526 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	PWP1	P21304	576 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	REC107	P21651	314 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	ADK2	P26364	225 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	DBF4	P32325	704 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	PUP2	P32379	260 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	HXT1	P32465	570 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	PDB1	P32473	366 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	YEL045C	P32616	141 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	UTR4	P32626	227 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	BUD2	P33314	1104 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	PXA2	P34230	853 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	PEX5	P35056	612 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	STB6	P36085	766 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	AUR1	P36107	401 aa	Predicted RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	NTR2	P36118	322 aa	Predicted RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	PDX3	P38075	228 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	CST26	P38226	397 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	VID24	P38263	362 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	HSM3	P38348	480 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	MSG5	P38590	489 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	OSH3	P38713	996 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	TRM5	P38793	499 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	LIN1	P38852	340 aa	Predicted RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	KEL1	P38853	1164 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	YDR089W	P38966	869 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	GAA1	P39012	614 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	EFM4	P40516	257 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	INA22	P40576	216 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	HYR1	P40581	163 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	CDC1	P40986	491 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	YFL012W	P43580	148 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	CTK2	P46962	323 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	SDT1	P53078	280 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	YGL138C	P53122	345 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	CUE3	P53137	624 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	MAL13	P53338	473 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	NCS2	P53923	493 aa	Predicted RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	ARK1	P53974	638 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	ADA2	Q02336	434 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	SPO19	Q03029	223 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	YDR476C	Q03362	224 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	RCF1	Q03713	159 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	YMR160W	Q03823	816 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	ARX1	Q03862	593 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	CSN9	Q03981	162 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	BUD22	Q04347	519 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	YMR027W	Q04371	470 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	ERB1	Q04660	807 aa	Known RBP	0.79	□□□□□ -2.28
SEC1	YDR164C	TAF9	Q05027	157 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	CRN1	Q06440	651 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	CDD1	Q06549	142 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	SWA2	Q06677	668 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	SIL1	Q08199	421 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	TCO89	Q08921	799 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	APC9	Q12107	265 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	BAG7	Q12128	409 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	RUP1	Q12242	671 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	IES3	Q12345	250 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	CEX1	Q12453	761 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	YJR112W-A	Q3E743	109 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	SEY1	Q99287	776 aa		0.79	□□□□□ -2.28
SEC1	YDR164C	FLO11	P08640	1367 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	NUP188	P52593	1655 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	RAD3	P06839	778 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	GDH1	P07262	454 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	0.78	□□□□□ -2.28	not detected
SEC1	YDR164C	GCD2	P12754	651 aa	Predicted RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	ALG1	P16661	449 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	EST1	P17214	699 aa	Predicted RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	GLN3	P18494	730 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	KGD1	P20967	1014 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	TRX1	P22217	103 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	MRPL25	P23369	157 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	YCL068C	P25593	260 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	YIH1	P25637	258 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	URA7	P28274	579 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	BMH1	P29311	267 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	BEM1	P29366	551 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	MEI4	P29467	408 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	SYN8	P31377	255 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	VPH1	P32563	840 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	TOA1	P32773	286 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	YME2	P32843	850 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	CSE2	P33308	149 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	WBP1	P33767	430 aa	Known RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	UBP11	P36026	717 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	DRE2	P36152	348 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	AGP2	P38090	596 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	MUM2	P38236	366 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	PHO88	P38264	188 aa	Predicted RBP	0.78	□□□□□ -2.28
SEC1	YDR164C	SMF2	P38778	549 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	YHR131C	P38835	850 aa		0.78	□□□□□ -2.28
SEC1	YDR164C	TDA11	P38854	504 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 126.3 ms