RNA–Protein interactions for RNA: YDR111C

ALT2, Transcript of Catalytically inactive alanine transaminase, yeast

Gene ALT2, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ALT2	YDR111C	YOR012W	Q12351	137 aa		5.85	□□□□□ -1.47
ALT2	YDR111C	ATR1	P13090	542 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	GFA1	P14742	717 aa	Known RBP	5.84	□□□□□ -1.47
ALT2	YDR111C	KTR1	P27810	393 aa	Known RBP	5.84	□□□□□ -1.47
ALT2	YDR111C	DEG1	P31115	442 aa	Known RBP	5.84	□□□□□ -1.47
ALT2	YDR111C	APE3	P37302	537 aa	Known RBP	5.84	□□□□□ -1.47
ALT2	YDR111C	YPK3	P38070	525 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	YBR062C	P38239	180 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	POP4	P38336	279 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	URA8	P38627	578 aa	Predicted RBP	5.84	□□□□□ -1.47
ALT2	YDR111C	BZZ1	P38822	633 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	AIM46	P38885	310 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	SMF1	P38925	575 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	ACA1	P39970	489 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	GIP2	P40036	548 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	PFK26	P40433	827 aa	Known RBP	5.84	□□□□□ -1.47
ALT2	YDR111C	HIS6	P40545	261 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	CIN1	P40987	1014 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	PMT4	P46971	762 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	SOL1	P50278	321 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	COS12	P53053	380 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	DUO1	P53168	247 aa	Known RBP	5.84	□□□□□ -1.47
ALT2	YDR111C	PKP2	P53170	491 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	BUD17	P53727	317 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	PRP38	Q00723	242 aa	Predicted RBP	5.84	□□□□□ -1.47
ALT2	YDR111C	UTP6	Q02354	440 aa	Known RBP	5.84	□□□□□ -1.47
ALT2	YDR111C	UME1	Q03010	460 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	SCS7	Q03529	384 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	MUS81	Q04149	632 aa	Predicted RBP	5.84	□□□□□ -1.47
ALT2	YDR111C	YMR226C	Q05016	267 aa	Known RBP	5.84	□□□□□ -1.47
ALT2	YDR111C	CDD1	Q06549	142 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	YDL086W	Q07505	273 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	YNG1	Q08465	219 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	FLC1	Q08967	793 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	YLR053C	Q12026	108 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	TGL5	Q12043	749 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	ELG1	Q12050	791 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
ALT2	YDR111C	YDR262W	Q12331	272 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	ZRT2	Q12436	422 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	VCX1	Q99385	411 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	YOR1	P53049	1477 aa		5.84	□□□□□ -1.47
ALT2	YDR111C	FRS1	P15624	595 aa	Known RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	MIR1	P23641	311 aa	Known RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	GCG1	P32656	232 aa	Known RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	PTK1	P36002	662 aa	Predicted RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	TVP38	P36164	337 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	DIA4	P38705	446 aa	Predicted RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	PLB1	P39105	664 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	SEO1	P39709	593 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	DSE1	P40077	573 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	LSM5	P40089	93 aa	Known RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	GPP2	P40106	250 aa	Known RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	SMX2	P40204	77 aa	Known RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	MET28	P40573	187 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	HXT9	P40885	567 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	DIM1	P41819	318 aa	Known RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	THI6	P41835	540 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	RPA34	P47006	233 aa	Predicted RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	NBP35	P52920	328 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	RRP46	P53256	223 aa	Predicted RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	YNL134C	P53912	376 aa	Known RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	SED5	Q01590	340 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	EBS1	Q03466	884 aa	Known RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	SMP3	Q04174	516 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	URH1	Q04179	340 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	YLR297W	Q05899	129 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	NKP2	Q06162	153 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	YLR036C	Q07986	203 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	TCO89	Q08921	799 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	RRP42	Q12277	265 aa	Predicted RBP	5.84	□□□□□ -1.48
ALT2	YDR111C	HRT3	Q12347	344 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	MRX4	Q12467	430 aa		5.84	□□□□□ -1.48
ALT2	YDR111C	TY3B-G	Q99315	1547 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	CDC25	P04821	1589 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	RPL19A	P0CX82	189 aa	Known RBP	5.83	□□□□□ -1.48
ALT2	YDR111C	RPL19B	P0CX83	189 aa	Predicted RBP	5.83	□□□□□ -1.48
ALT2	YDR111C	RAD18	P10862	487 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	SEC59	P20048	519 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	PRE1	P22141	198 aa	Known RBP	5.83	□□□□□ -1.48
ALT2	YDR111C	CTS1	P29029	562 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	RML2	P32611	393 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	PTM1	P32857	523 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	PGM1	P33401	570 aa	Known RBP	5.83	□□□□□ -1.48
ALT2	YDR111C	DAD2	P36162	133 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	PPS1	P38148	807 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	FAT1	P38225	669 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	HXT13	P39924	564 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	GNA1	P43577	159 aa	Predicted RBP	5.83	□□□□□ -1.48
ALT2	YDR111C	IRC7	P43623	340 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	YPT11	P48559	417 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	UBC12	P52491	188 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	NQM1	P53228	333 aa	Predicted RBP	5.83	□□□□□ -1.48
ALT2	YDR111C	TIM10	P87108	93 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	SNP1	Q00916	300 aa	Predicted RBP	5.83	□□□□□ -1.48
ALT2	YDR111C	YPL071C	Q02864	156 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	EEB1	Q02891	456 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	NAN1	Q02931	896 aa	Known RBP	5.83	□□□□□ -1.48
ALT2	YDR111C	PFA5	Q03289	374 aa		5.83	□□□□□ -1.48
ALT2	YDR111C	YAP6	Q03935	383 aa		5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms