RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	DSL1	P53847	754 aa		4.09	□□□□□ -1.76
RTK1	YDL025C	YNL234W	P53857	426 aa		4.09	□□□□□ -1.76
RTK1	YDL025C	RHO4	Q00246	291 aa		4.09	□□□□□ -1.76
RTK1	YDL025C	LGE1	Q02796	332 aa	Known RBP	4.09	□□□□□ -1.76
RTK1	YDL025C	NDL1	Q06568	189 aa		4.09	□□□□□ -1.76
RTK1	YDL025C	GEA1	P47102	1408 aa	Predicted RBP	4.08	□□□□□ -1.76
RTK1	YDL025C	SUC2	P00724	532 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	LEU4	P06208	619 aa	Known RBP	4.08	□□□□□ -1.76
RTK1	YDL025C	STE3	P06783	470 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	SCH9	P11792	824 aa	Known RBP	4.08	□□□□□ -1.76
RTK1	YDL025C	NDI1	P32340	513 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	RTT105	P40063	208 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	PRM1	P53835	661 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	NUP100	Q02629	959 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	VTC3	Q02725	835 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	YDR541C	Q03049	344 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	YDR387C	Q04162	555 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	DIC1	Q06143	298 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	YLR112W	Q12130	139 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	POM152	P39685	1337 aa		4.08	□□□□□ -1.76
RTK1	YDL025C	YPR117W	Q06116	2489 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	ADE4	P04046	510 aa	Known RBP	4.07	□□□□□ -1.76
RTK1	YDL025C	ILV5	P06168	395 aa	Known RBP	4.07	□□□□□ -1.76
RTK1	YDL025C	RPS2	P25443	254 aa	Known RBP	4.07	□□□□□ -1.76
RTK1	YDL025C	PPZ2	P33329	710 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	PCH2	P38126	564 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	RRP4	P38792	359 aa	Known RBP	4.07	□□□□□ -1.76
RTK1	YDL025C	YDR089W	P38966	869 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	PCF11	P39081	626 aa	Predicted RBP	4.07	□□□□□ -1.76
RTK1	YDL025C	ELP2	P42935	788 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	EFM3	P47163	339 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	ASN2	P49090	572 aa	Known RBP	4.07	□□□□□ -1.76
RTK1	YDL025C	GLO2	Q05584	274 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	ORM2	Q06144	216 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	PHO92	Q06390	306 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	BUG1	Q12191	341 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	FRE7	Q12333	620 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	RPI1	P23250	407 aa	Known RBP	4.07	□□□□□ -1.76
RTK1	YDL025C	DAL80	P26343	269 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	HSP104	P31539	908 aa	Known RBP	4.07	□□□□□ -1.76
RTK1	YDL025C	ECM25	P32525	599 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	UTR4	P32626	227 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	FLO10	P36170	1169 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	PHO86	P46956	311 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	UTP6	Q02354	440 aa	Known RBP	4.07	□□□□□ -1.76
RTK1	YDL025C	CAC2	Q04199	468 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	IVY1	Q04934	453 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	SRN2	Q99176	213 aa		4.07	□□□□□ -1.76
RTK1	YDL025C	TOM1	Q03280	3268 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	CFT1	Q06632	1357 aa	Known RBP	4.06	□□□□□ -1.76
RTK1	YDL025C	NFT1	P0CE68	1218 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	ERG11	P10614	530 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	GRR1	P24814	1151 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	RDS1	P25611	832 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	PPZ1	P26570	692 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	SSE1	P32589	693 aa	Known RBP	4.06	□□□□□ -1.76
RTK1	YDL025C	KAP104	P38217	918 aa	Known RBP	4.06	□□□□□ -1.76
RTK1	YDL025C	LEU5	P38702	357 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	SPC97	P38863	823 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	GPI16	P38875	610 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	STN1	P38960	494 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	RRP46	P53256	223 aa	Predicted RBP	4.06	□□□□□ -1.76
RTK1	YDL025C	GPI1	P53306	609 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	IDP3	P53982	420 aa	Known RBP	4.06	□□□□□ -1.76
RTK1	YDL025C	ABZ2	Q03266	374 aa		4.06	□□□□□ -1.76
RTK1	YDL025C	APE2	P32454	952 aa	Known RBP	4.05	□□□□□ -1.76
RTK1	YDL025C	NIP1	P32497	812 aa	Known RBP	4.05	□□□□□ -1.76
RTK1	YDL025C	PPQ1	P32945	549 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	PHD1	P36093	366 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	GAT2	P40209	560 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	YPT11	P48559	417 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	ERV25	P54837	211 aa	Known RBP	4.05	□□□□□ -1.76
RTK1	YDL025C	EKI1	Q03764	534 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	RKM5	Q12367	367 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	RAD24	P32641	659 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
RTK1	YDL025C	RIB7	P33312	244 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	MSG5	P38590	489 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	SNO3	P43544	222 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	TRS85	P46944	698 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	SLD5	Q03406	294 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	RRB1	Q04225	511 aa	Known RBP	4.05	□□□□□ -1.76
RTK1	YDL025C	RRP5	Q05022	1729 aa	Known RBP	4.05	□□□□□ -1.76
RTK1	YDL025C	IPK1	Q06667	281 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	NRT1	Q08485	598 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	OSW1	Q08692	278 aa		4.05	□□□□□ -1.76
RTK1	YDL025C	CDC21	P06785	304 aa		4.04	□□□□□ -1.76
RTK1	YDL025C	GID7	P25569	745 aa		4.04	□□□□□ -1.76
RTK1	YDL025C	YSC83	P32792	385 aa		4.04	□□□□□ -1.76
RTK1	YDL025C	PDR3	P33200	976 aa		4.04	□□□□□ -1.76
RTK1	YDL025C	SCO2	P38072	301 aa		4.04	□□□□□ -1.76
RTK1	YDL025C	QDR3	P38227	689 aa		4.04	□□□□□ -1.76
RTK1	YDL025C	FAU1	P40099	211 aa		4.04	□□□□□ -1.76
RTK1	YDL025C	QRI1	P43123	477 aa	Known RBP	4.04	□□□□□ -1.76
RTK1	YDL025C	GAT1	P43574	510 aa		4.04	□□□□□ -1.76
RTK1	YDL025C	MPS2	P53159	387 aa		4.04	□□□□□ -1.76
RTK1	YDL025C	PCP1	P53259	346 aa		4.04	□□□□□ -1.76
RTK1	YDL025C	ARP5	P53946	755 aa		4.04	□□□□□ -1.76
RTK1	YDL025C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
RTK1	YDL025C	RSC9	Q03124	581 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms