RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C TY1A-DR1Q03856 440 aa7.08□□□□□ -1.28
CCR4YAL021C TY1A-ML1Q04706 440 aaKnown RBP7.08□□□□□ -1.28
CCR4YAL021C FRA1Q07825 749 aa7.08□□□□□ -1.28
CCR4YAL021C NGL1Q08213 363 aaKnown RBP7.08□□□□□ -1.28
CCR4YAL021C PPM2Q08282 695 aa7.08□□□□□ -1.28
CCR4YAL021C YOR365CQ08844 703 aa7.08□□□□□ -1.28
CCR4YAL021C TY1A-BRQ12217 440 aa7.08□□□□□ -1.28
CCR4YAL021C TY1A-NL2Q12470 440 aa7.08□□□□□ -1.28
CCR4YAL021C TY1A-GR2Q12485 440 aa7.08□□□□□ -1.28
CCR4YAL021C DIT2P21595 489 aa7.07□□□□□ -1.28
CCR4YAL021C DCC1P25559 380 aa7.07□□□□□ -1.28
CCR4YAL021C CDC20P26309 610 aa7.07□□□□□ -1.28
CCR4YAL021C KTR1P27810 393 aaKnown RBP7.07□□□□□ -1.28
CCR4YAL021C YBR285WP38354 144 aa7.07□□□□□ -1.28
CCR4YAL021C CYC2P38909 366 aa7.07□□□□□ -1.28
CCR4YAL021C PHO86P46956 311 aa7.07□□□□□ -1.28
CCR4YAL021C AIM22P47051 409 aa7.07□□□□□ -1.28
CCR4YAL021C YAP1802P53309 568 aa7.07□□□□□ -1.28
CCR4YAL021C BCP1Q06338 283 aa7.07□□□□□ -1.28
CCR4YAL021C FMP45Q07651 309 aa7.07□□□□□ -1.28
CCR4YAL021C SLF1Q12034 447 aaKnown RBP7.07□□□□□ -1.28
CCR4YAL021C INP53Q12271 1107 aa7.07□□□□□ -1.28
CCR4YAL021C YOP1Q12402 180 aa7.07□□□□□ -1.28
CCR4YAL021C FSH3Q99369 266 aa7.07□□□□□ -1.28
CCR4YAL021C COX4P04037 155 aa7.07□□□□□ -1.28
CCR4YAL021C PTC6P25646 442 aa7.07□□□□□ -1.28
CCR4YAL021C YET1P35723 206 aa7.07□□□□□ -1.28
CCR4YAL021C YNK1P36010 153 aaKnown RBP7.07□□□□□ -1.28
CCR4YAL021C ATG7P38862 630 aa7.07□□□□□ -1.28
CCR4YAL021C KHA1P40309 873 aa7.07□□□□□ -1.28
CCR4YAL021C MID1P41821 548 aa7.07□□□□□ -1.28
CCR4YAL021C SAD1P43589 448 aa7.07□□□□□ -1.28
CCR4YAL021C ARH1P48360 493 aa7.07□□□□□ -1.28
CCR4YAL021C ARE2P53629 642 aaKnown RBP7.07□□□□□ -1.28
CCR4YAL021C YNR065CP53751 1116 aa7.07□□□□□ -1.28
CCR4YAL021C STP1Q00947 519 aa7.07□□□□□ -1.28
CCR4YAL021C TRM82Q03774 444 aa7.07□□□□□ -1.28
CCR4YAL021C VBA4Q04602 768 aaKnown RBP7.07□□□□□ -1.28
CCR4YAL021C CDC123Q05791 360 aa7.07□□□□□ -1.28
CCR4YAL021C PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
CCR4YAL021C SSA3P09435 649 aaKnown RBP7.06□□□□□ -1.28
CCR4YAL021C PEP5P12868 1029 aa7.06□□□□□ -1.28
CCR4YAL021C AGP1P25376 633 aa7.06□□□□□ -1.28
CCR4YAL021C URA7P28274 579 aaKnown RBP7.06□□□□□ -1.28
CCR4YAL021C PRO3P32263 286 aaKnown RBP7.06□□□□□ -1.28
CCR4YAL021C SPS19P32573 292 aaKnown RBP7.06□□□□□ -1.28
CCR4YAL021C COS8P38723 381 aa7.06□□□□□ -1.28
CCR4YAL021C PLB1P39105 664 aa7.06□□□□□ -1.28
CCR4YAL021C RMD6P39975 231 aa7.06□□□□□ -1.28
CCR4YAL021C LSM4P40070 187 aaKnown RBP7.06□□□□□ -1.28
CCR4YAL021C NUP82P40368 713 aa7.06□□□□□ -1.28
CCR4YAL021C THI12P42883 340 aa7.06□□□□□ -1.28
CCR4YAL021C SLS1P42900 643 aa7.06□□□□□ -1.28
CCR4YAL021C THI5P43534 340 aa7.06□□□□□ -1.28
CCR4YAL021C RTT101P47050 842 aa7.06□□□□□ -1.28
CCR4YAL021C NOP13P53883 403 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
CCR4YAL021C DIA1P54005 336 aa7.06□□□□□ -1.28
CCR4YAL021C ALO1P54783 526 aaKnown RBP7.06□□□□□ -1.28
CCR4YAL021C RSC9Q03124 581 aa7.06□□□□□ -1.28
CCR4YAL021C ADY4Q05955 493 aa7.06□□□□□ -1.28
CCR4YAL021C THI13Q07748 340 aa7.06□□□□□ -1.28
CCR4YAL021C SPO75Q07798 868 aa7.06□□□□□ -1.28
CCR4YAL021C HER1Q12276 1246 aa7.06□□□□□ -1.28
CCR4YAL021C ECM3Q99252 613 aa7.06□□□□□ -1.28
CCR4YAL021C ADH2P00331 348 aaKnown RBP7.06□□□□□ -1.28
CCR4YAL021C MET16P18408 261 aaPredicted RBP7.06□□□□□ -1.28
CCR4YAL021C RPC25P35718 212 aa7.06□□□□□ -1.28
CCR4YAL021C COS12P53053 380 aa7.06□□□□□ -1.28
CCR4YAL021C DUO1P53168 247 aaKnown RBP7.06□□□□□ -1.28
CCR4YAL021C GPI1P53306 609 aa7.06□□□□□ -1.28
CCR4YAL021C ARK1P53974 638 aa7.06□□□□□ -1.28
CCR4YAL021C HXT15P54854 567 aa7.06□□□□□ -1.28
CCR4YAL021C SMA1Q02651 245 aa7.06□□□□□ -1.28
CCR4YAL021C YML083CQ04526 418 aa7.06□□□□□ -1.28
CCR4YAL021C VTH1P40438 1549 aa7.06□□□□□ -1.28
CCR4YAL021C SAM1P10659 382 aaKnown RBP7.05□□□□□ -1.28
CCR4YAL021C ERD2P18414 219 aa7.05□□□□□ -1.28
CCR4YAL021C OPT1P40897 799 aa7.05□□□□□ -1.28
CCR4YAL021C YAR1P46683 200 aa7.05□□□□□ -1.28
CCR4YAL021C MRX5P47007 382 aa7.05□□□□□ -1.28
CCR4YAL021C TIM21P53220 239 aa7.05□□□□□ -1.28
CCR4YAL021C MEP3P53390 489 aa7.05□□□□□ -1.28
CCR4YAL021C YTP1P53584 459 aa7.05□□□□□ -1.28
CCR4YAL021C ARA2Q04212 335 aa7.05□□□□□ -1.28
CCR4YAL021C MSC3Q05812 728 aa7.05□□□□□ -1.28
CCR4YAL021C YOR283WQ12040 230 aaKnown RBP7.05□□□□□ -1.28
CCR4YAL021C YRR1Q12172 810 aa7.05□□□□□ -1.28
CCR4YAL021C SRF1Q12516 437 aa7.05□□□□□ -1.28
CCR4YAL021C RGS2Q99188 309 aa7.05□□□□□ -1.28
CCR4YAL021C NUP188P52593 1655 aaKnown RBP7.05□□□□□ -1.28
CCR4YAL021C ARG82P07250 355 aa7.05□□□□□ -1.28
CCR4YAL021C TY1A-LR4P0C2I8 440 aaKnown RBP7.05□□□□□ -1.28
CCR4YAL021C TY1A-DR6P0CX70 440 aa7.05□□□□□ -1.28
CCR4YAL021C TY1A-ER1P0CX71 440 aa7.05□□□□□ -1.28
CCR4YAL021C TY1A-LR2P0CX72 440 aa7.05□□□□□ -1.28
CCR4YAL021C TY1A-PLP0CX73 440 aa7.05□□□□□ -1.28
CCR4YAL021C TY1A-JR1P0CX74 440 aa7.05□□□□□ -1.28
CCR4YAL021C TY1A-LR3P0CX75 440 aa7.05□□□□□ -1.28
CCR4YAL021C TY1A-ML2P0CX76 440 aa7.05□□□□□ -1.28
CCR4YAL021C BAR1P12630 587 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms