RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 PPP1R13LQ8WUF5 828 aa13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 LEO1Q8WVC0 666 aaPredicted RBP13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 ATXN2LQ8WWM7 1075 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 ASB2Q96Q27 587 aa13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 MTIF3Q9H2K0 278 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 ADD3Q9UEY8 706 aaKnown RBP13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 GBF1Q92538 1859 aa13.58□□□□□ -0.24
ERGIC3-220ENST00000640748 TRANK1O15050 2925 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 XIRP2A4UGR9 3374 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 TNFRSF10AO00220 468 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 PLEKHA8P1O95397 391 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 SNHG28P0DPA3 235 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 CALML3P27482 149 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 RPS6P62753 249 aaKnown RBP13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 ZNF543Q08ER8 600 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 CCDC85BQ15834 202 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 CMTR1Q8N1G2 835 aaKnown RBP13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 SLC28A3Q9HAS3 691 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 THEGQ9P2T0 379 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 PCDHA11Q9Y5I1 949 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 SLC4A7Q9Y6M7 1214 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 CNTNAP5Q8WYK1 1306 aa13.57□□□□□ -0.24
ERGIC3-220ENST00000640748 SCN10AQ9Y5Y9 1956 aa13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 GOLGA6L4A6NEF3 574 aa13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 IGFBP4P22692 258 aa13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 FUT2Q10981 343 aa13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 NBPF20Q3BBV1 942 aa13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 RNF207Q6ZRF8 634 aa13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 RPUSD2Q8IZ73 545 aaKnown RBP13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 SRBD1Q8N5C6 995 aaKnown RBP13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 OR6J1Q8NGC5 347 aa13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 COPS5Q92905 334 aa13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 GJB4Q9NTQ9 266 aa13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 POLR3EQ9NVU0 708 aa13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 RCOR1Q9UKL0 485 aa13.56□□□□□ -0.24
ERGIC3-220ENST00000640748 NCOR1O75376 2440 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 BDP1A6H8Y1 2624 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 A6NJR5 290 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 ARIH2O95376 493 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 MMP1P03956 469 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 MYL3P08590 195 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 SUPT20HL2P0C7V6 817 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 ATP2A2P16615 1042 aaKnown RBP13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 CPT1AP50416 773 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 MYSM1Q5VVJ2 828 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 CTAGE1Q96RT6 745 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 USP28Q96RU2 1077 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 LZTS2Q9BRK4 669 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 MTG1Q9BT17 334 aaPredicted RBP13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 CPVLQ9H3G5 476 aa13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 V9GY48 417 aaPredicted RBP13.55□□□□□ -0.24
ERGIC3-220ENST00000640748 GOLGA6L3A6NEY3 463 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 ZBBXA8MT70 800 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 KIF28PB7ZC32 967 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 ARHGEF15O94989 841 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 PFKMP08237 780 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 U2AF2P26368 475 aaKnown RBP eCLIP13.54□□□□□ -0.247e-6■■□□□ 14.4
ERGIC3-220ENST00000640748 ZNF445P59923 1031 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 MRPS5P82675 430 aaKnown RBP13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 PDE4DQ08499 809 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 PKN1Q16512 942 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 ZSCAN23Q3MJ62 389 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 L1TD1Q5T7N2 865 aaKnown RBP13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 PPP2R2DQ66LE6 453 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 NFRKBQ6P4R8 1299 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 DEFB128Q7Z7B8 93 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 DNERQ8NFT8 737 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 ADAMTS19Q8TE59 1207 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 SCFD2Q8WU76 684 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 RTEL1Q9NZ71 1219 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 TMEM63CQ9P1W3 806 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 MAD2L2Q9UI95 211 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 SCN5AQ14524 2016 aa13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 BAZ2BQ9UIF8 2168 aaKnown RBP13.54□□□□□ -0.24
ERGIC3-220ENST00000640748 PALM3A6NDB9 673 aaPredicted RBP13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 EPOPA6NHQ4 379 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 RBAK-RBAKDNI3L0D1 243 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 RFXAPO00287 272 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 NKRFO15226 690 aaKnown RBP eCLIP13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 YEATS4O95619 227 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 CA3P07451 260 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 PARP1P09874 1014 aaKnown RBP13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 IQCF3P0C7M6 154 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 GOLGA8HP0CJ92 632 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 CEBPZQ03701 1054 aaKnown RBP13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 CCDC183Q5T5S1 534 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 CCDC62Q6P9F0 684 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 DIS3L2Q8IYB7 885 aaKnown RBP13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 TBC1D5Q92609 795 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 FOXP1Q9H334 677 aaPredicted RBP13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 COL20A1Q9P218 1284 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 KCNJ14Q9UNX9 436 aa13.53□□□□□ -0.24
ERGIC3-220ENST00000640748 PITPNM1O00562 1244 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 KPNA6O60684 536 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 LETM1O95202 739 aaPredicted RBP13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 TXNP10599 105 aaKnown RBP13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 SCG2P13521 617 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 SMARCA1P28370 1054 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 GPNMBQ14956 572 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 STK38Q15208 465 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms