RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 RTP5Q14D33 572 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 MCTP2Q6DN12 878 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 OTOP3Q7RTS5 596 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 CXorf38Q8TB03 319 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.5□□□□□ -1.21
CCDC7-216ENST00000640058 PMFBP1Q8TBY8 1022 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 PHOSPHO1Q8TCT1 267 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 ZFYVE21Q9BQ24 234 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 BDH2Q9BUT1 245 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 NGRNQ9NPE2 291 aaKnown RBP7.5□□□□□ -1.21
CCDC7-216ENST00000640058 KDM2BQ8NHM5 1336 aa7.5□□□□□ -1.21
CCDC7-216ENST00000640058 FAM221BA6H8Z2 402 aa7.49□□□□□ -1.21
CCDC7-216ENST00000640058 DDX3XO00571 662 aaKnown RBP eCLIP7.49□□□□□ -1.21
CCDC7-216ENST00000640058 NKRFO15226 690 aaKnown RBP eCLIP7.49□□□□□ -1.21
CCDC7-216ENST00000640058 CNR2P34972 360 aa7.49□□□□□ -1.21
CCDC7-216ENST00000640058 SERINC3Q13530 473 aa7.49□□□□□ -1.21
CCDC7-216ENST00000640058 RASA3Q14644 834 aa7.49□□□□□ -1.21
CCDC7-216ENST00000640058 RGL3Q3MIN7 710 aa7.49□□□□□ -1.21
CCDC7-216ENST00000640058 UBXN11Q5T124 520 aa7.49□□□□□ -1.21
CCDC7-216ENST00000640058 PRAMEF18Q5VWM3 479 aa7.49□□□□□ -1.21
CCDC7-216ENST00000640058 ZBTB38Q8NAP3 1195 aaPredicted RBP7.49□□□□□ -1.21
CCDC7-216ENST00000640058 EXOC2Q96KP1 924 aa7.49□□□□□ -1.21
CCDC7-216ENST00000640058 IPO9Q96P70 1041 aaKnown RBP7.49□□□□□ -1.21
CCDC7-216ENST00000640058 DEPDC7Q96QD5 511 aa7.49□□□□□ -1.21
CCDC7-216ENST00000640058 CROTQ9UKG9 612 aa7.49□□□□□ -1.21
CCDC7-216ENST00000640058 DUSP10Q9Y6W6 482 aa7.49□□□□□ -1.21
CCDC7-216ENST00000640058 TUSC3Q13454 348 aa7.48□□□□□ -1.21
CCDC7-216ENST00000640058 PHF19Q5T6S3 580 aa7.48□□□□□ -1.21
CCDC7-216ENST00000640058 CYP4F22Q6NT55 531 aa7.48□□□□□ -1.21
CCDC7-216ENST00000640058 MTDHQ86UE4 582 aaKnown RBP7.48□□□□□ -1.21
CCDC7-216ENST00000640058 SCUBE1Q8IWY4 988 aa7.48□□□□□ -1.21
CCDC7-216ENST00000640058 CLEC4DQ8WXI8 215 aa7.48□□□□□ -1.21
CCDC7-216ENST00000640058 ALG1Q9BT22 464 aa7.48□□□□□ -1.21
CCDC7-216ENST00000640058 SNTG2Q9NY99 539 aa7.48□□□□□ -1.21
CCDC7-216ENST00000640058 WASF3Q9UPY6 502 aa7.48□□□□□ -1.21
CCDC7-216ENST00000640058 FAM47E-STBD1D6RA91 191 aa7.47□□□□□ -1.21
CCDC7-216ENST00000640058 SUMO1P63165 101 aaKnown RBP7.47□□□□□ -1.21
CCDC7-216ENST00000640058 SPIRE1Q08AE8 756 aa7.47□□□□□ -1.21
CCDC7-216ENST00000640058 SKOR2Q2VWA4 1001 aaPredicted RBP7.47□□□□□ -1.21
CCDC7-216ENST00000640058 PRR31Q5SQ13 230 aa7.47□□□□□ -1.21
CCDC7-216ENST00000640058 DPH6Q7L8W6 267 aa7.47□□□□□ -1.21
CCDC7-216ENST00000640058 UHMK1Q8TAS1 419 aaKnown RBP7.47□□□□□ -1.21
CCDC7-216ENST00000640058 CLIC6Q96NY7 704 aa7.47□□□□□ -1.21
CCDC7-216ENST00000640058 LNPKQ9C0E8 428 aa7.47□□□□□ -1.21
CCDC7-216ENST00000640058 CELA3BP08861 270 aa7.46□□□□□ -1.22
CCDC7-216ENST00000640058 C6orf222P0C671 652 aaPredicted RBP7.46□□□□□ -1.22
CCDC7-216ENST00000640058 TRIM48Q8IWZ4 208 aa7.46□□□□□ -1.22
CCDC7-216ENST00000640058 TXNDC5Q8NBS9 432 aaKnown RBP7.46□□□□□ -1.22
CCDC7-216ENST00000640058 ARMC5Q96C12 935 aa7.46□□□□□ -1.22
CCDC7-216ENST00000640058 SRPK1Q96SB4 655 aaKnown RBP7.46□□□□□ -1.22
CCDC7-216ENST00000640058 CD244Q9BZW8 370 aa7.46□□□□□ -1.22
CCDC7-216ENST00000640058 DSEQ9UL01 958 aa7.46□□□□□ -1.22
CCDC7-216ENST00000640058 TELO2Q9Y4R8 837 aa7.46□□□□□ -1.22
CCDC7-216ENST00000640058 PCDHA8Q9Y5H6 950 aa7.46□□□□□ -1.22
CCDC7-216ENST00000640058 AQP7O14520 342 aa7.45□□□□□ -1.22
CCDC7-216ENST00000640058 PLP2Q04941 152 aa7.45□□□□□ -1.22
CCDC7-216ENST00000640058 RBL2Q08999 1139 aa7.45□□□□□ -1.22
CCDC7-216ENST00000640058 ERICH6BQ5W0A0 696 aa7.45□□□□□ -1.22
CCDC7-216ENST00000640058 PTPRN2Q92932 1015 aa7.45□□□□□ -1.22
CCDC7-216ENST00000640058 KRTAP4-9Q9BYQ8 210 aa7.45□□□□□ -1.22
CCDC7-216ENST00000640058 CYP1A1P04798 512 aaPredicted RBP7.44□□□□□ -1.22
CCDC7-216ENST00000640058 SRGAP2CP0DJJ0 459 aa7.44□□□□□ -1.22
CCDC7-216ENST00000640058 ZNF28P17035 718 aa7.44□□□□□ -1.22
CCDC7-216ENST00000640058 MLLT6P55198 1093 aaPredicted RBP7.44□□□□□ -1.22
CCDC7-216ENST00000640058 GUCY1A3Q02108 690 aa7.44□□□□□ -1.22
CCDC7-216ENST00000640058 PAN2Q504Q3 1202 aaKnown RBP7.44□□□□□ -1.22
CCDC7-216ENST00000640058 HABP4Q5JVS0 413 aaKnown RBP7.44□□□□□ -1.22
CCDC7-216ENST00000640058 FAM26FQ5R3K3 315 aa7.44□□□□□ -1.22
CCDC7-216ENST00000640058 VASNQ6EMK4 673 aa7.44□□□□□ -1.22
CCDC7-216ENST00000640058 MAMDC2Q7Z304 686 aaPredicted RBP7.44□□□□□ -1.22
CCDC7-216ENST00000640058 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.44□□□□□ -1.22
CCDC7-216ENST00000640058 PROSER1Q86XN7 944 aa7.44□□□□□ -1.22
CCDC7-216ENST00000640058 TTLL11Q8NHH1 800 aa7.44□□□□□ -1.22
CCDC7-216ENST00000640058 TMEM209Q96SK2 561 aa7.44□□□□□ -1.22
CCDC7-216ENST00000640058 DNAJC2Q99543 621 aaKnown RBP7.44□□□□□ -1.22
CCDC7-216ENST00000640058 DNAJC7Q99615 494 aa7.44□□□□□ -1.22
CCDC7-216ENST00000640058 MRPS23Q9Y3D9 190 aaKnown RBP7.44□□□□□ -1.22
CCDC7-216ENST00000640058 MROH6A6NGR9 719 aa7.43□□□□□ -1.22
CCDC7-216ENST00000640058 FAHP16930 419 aa7.43□□□□□ -1.22
CCDC7-216ENST00000640058 IL13P35225 146 aa7.43□□□□□ -1.22
CCDC7-216ENST00000640058 PAK1Q13153 545 aa7.43□□□□□ -1.22
CCDC7-216ENST00000640058 SF3A1Q15459 793 aaKnown RBP7.43□□□□□ -1.22
CCDC7-216ENST00000640058 ZFYVE27Q5T4F4 411 aa7.43□□□□□ -1.22
CCDC7-216ENST00000640058 TRMT10BQ6PF06 316 aaKnown RBP7.43□□□□□ -1.22
CCDC7-216ENST00000640058 ZCCHC14Q8WYQ9 949 aaKnown RBP7.43□□□□□ -1.22
CCDC7-216ENST00000640058 DHRS4Q9BTZ2 278 aa7.43□□□□□ -1.22
CCDC7-216ENST00000640058 L2HGDHQ9H9P8 463 aa7.43□□□□□ -1.22
CCDC7-216ENST00000640058 NUB1Q9Y5A7 615 aa7.43□□□□□ -1.22
CCDC7-216ENST00000640058 PCDHA9Q9Y5H5 950 aa7.43□□□□□ -1.22
CCDC7-216ENST00000640058 TCRBV5S4A2TA0A5A2 114 aa7.42□□□□□ -1.22
CCDC7-216ENST00000640058 PYGMP11217 842 aa7.42□□□□□ -1.22
CCDC7-216ENST00000640058 KRT15P19012 456 aa7.42□□□□□ -1.22
CCDC7-216ENST00000640058 GLRBP48167 497 aa7.42□□□□□ -1.22
CCDC7-216ENST00000640058 KCTD1Q719H9 257 aa7.42□□□□□ -1.22
CCDC7-216ENST00000640058 SH3RF2Q8TEC5 729 aa7.42□□□□□ -1.22
CCDC7-216ENST00000640058 CATSPERZQ9NTU4 200 aa7.42□□□□□ -1.22
CCDC7-216ENST00000640058 NDOR1Q9UHB4 597 aa7.42□□□□□ -1.22
CCDC7-216ENST00000640058 GABREP78334 506 aa7.41□□□□□ -1.22
CCDC7-216ENST00000640058 PRRT2Q7Z6L0 340 aaPredicted RBP7.41□□□□□ -1.22
CCDC7-216ENST00000640058 PCDH19Q8TAB3 1148 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms