RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 TNFRSF10AO00220 468 aa19.45■□□□□ 0.7
SMN2-216ENST00000638794 NOP56O00567 594 aaKnown RBP19.45■□□□□ 0.7
SMN2-216ENST00000638794 SH2B2O14492 632 aaPredicted RBP19.45■□□□□ 0.7
SMN2-216ENST00000638794 PLEKHA8P1O95397 391 aa19.45■□□□□ 0.7
SMN2-216ENST00000638794 HOXC8P31273 242 aa19.45■□□□□ 0.7
SMN2-216ENST00000638794 MCM5P33992 734 aa19.45■□□□□ 0.7
SMN2-216ENST00000638794 THPOP40225 353 aa19.45■□□□□ 0.7
SMN2-216ENST00000638794 NEDD9Q14511 834 aa19.45■□□□□ 0.7
SMN2-216ENST00000638794 CYFIP1Q7L576 1253 aa19.45■□□□□ 0.7
SMN2-216ENST00000638794 SMARCC2Q8TAQ2 1214 aa19.45■□□□□ 0.7
SMN2-216ENST00000638794 MTA3Q9BTC8 594 aa19.45■□□□□ 0.7
SMN2-216ENST00000638794 ZBED2Q9BTP6 218 aa19.45■□□□□ 0.7
SMN2-216ENST00000638794 SEC63Q9UGP8 760 aaKnown RBP19.45■□□□□ 0.7
SMN2-216ENST00000638794 C17orf102A2RUQ5 167 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 PIK3CDO00329 1044 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 MEIS2O14770 477 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 FIBPO43427 364 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 GJB5O95377 273 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 SMIM10L2AP0DMW4 78 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 SMIM10L2BP0DMW5 78 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 RXRAP19793 462 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 SMARCA1P28370 1054 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 IKBKEQ14164 716 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 NFXL1Q6ZNB6 911 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 CMTR1Q8N1G2 835 aaKnown RBP19.44■□□□□ 0.7
SMN2-216ENST00000638794 SRBD1Q8N5C6 995 aaKnown RBP19.44■□□□□ 0.7
SMN2-216ENST00000638794 ADAMTS19Q8TE59 1207 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 CUL5Q93034 780 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 ATP6V0A1Q93050 837 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 LZTS2Q9BRK4 669 aa19.44■□□□□ 0.7
SMN2-216ENST00000638794 BDP1A6H8Y1 2624 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 CCDC69A6NI79 296 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 SLC27A2O14975 620 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 EFCAB14O75071 495 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 LGR5O75473 907 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 TFF2Q03403 129 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 GRB10Q13322 594 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 SKIV2LQ15477 1246 aaKnown RBP19.43■□□□□ 0.7
SMN2-216ENST00000638794 PCNX4Q63HM2 1172 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 TMEM87BQ96K49 555 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 GPR20Q99678 358 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 ESYT1Q9BSJ8 1104 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 USP26Q9BXU7 913 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 RNPEPQ9H4A4 650 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 TELO2Q9Y4R8 837 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 SIP14410 1827 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 EMSYQ7Z589 1322 aa19.43■□□□□ 0.7
SMN2-216ENST00000638794 RSPH10B2B2RC85 870 aa19.42■□□□□ 0.7
SMN2-216ENST00000638794 TREHO43280 583 aa19.42■□□□□ 0.7
SMN2-216ENST00000638794 LPXNO60711 386 aa19.42■□□□□ 0.7
SMN2-216ENST00000638794 RSPH10BP0C881 870 aa19.42■□□□□ 0.7
SMN2-216ENST00000638794 GNAQP50148 359 aa19.42■□□□□ 0.7
SMN2-216ENST00000638794 CREB3L3Q68CJ9 461 aa19.42■□□□□ 0.7
SMN2-216ENST00000638794 TRIM50Q86XT4 487 aa19.42■□□□□ 0.7
SMN2-216ENST00000638794 TMTC2Q8N394 836 aa19.42■□□□□ 0.7
SMN2-216ENST00000638794 IL27Q8NEV9 243 aa19.42■□□□□ 0.7
SMN2-216ENST00000638794 RAD9AQ99638 391 aa19.42■□□□□ 0.7
SMN2-216ENST00000638794 KAT6AQ92794 2004 aa19.42■□□□□ 0.7
SMN2-216ENST00000638794 LIFRP42702 1097 aa19.41■□□□□ 0.7
SMN2-216ENST00000638794 SP4Q02446 784 aa19.41■□□□□ 0.7
SMN2-216ENST00000638794 NECTIN1Q15223 517 aa19.41■□□□□ 0.7
SMN2-216ENST00000638794 FAM117BQ6P1L5 589 aa19.41■□□□□ 0.7
SMN2-216ENST00000638794 XRRA1Q6P2D8 792 aa19.41■□□□□ 0.7
SMN2-216ENST00000638794 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.41■□□□□ 0.7
SMN2-216ENST00000638794 RAB11FIP4Q86YS3 637 aa19.41■□□□□ 0.7
SMN2-216ENST00000638794 DBF4BQ8NFT6 615 aa19.41■□□□□ 0.7
SMN2-216ENST00000638794 UHRF1Q96T88 793 aaPredicted RBP19.41■□□□□ 0.7
SMN2-216ENST00000638794 SENP7Q9BQF6 1050 aa19.41■□□□□ 0.7
SMN2-216ENST00000638794 LRRC2Q9BYS8 371 aa19.41■□□□□ 0.7
SMN2-216ENST00000638794 hCG_1642624A0A1W2PR95 340 aa19.4■□□□□ 0.7
SMN2-216ENST00000638794 CTSHP09668 335 aa19.4■□□□□ 0.7
SMN2-216ENST00000638794 CALM1P0DP23 149 aa19.4■□□□□ 0.7
SMN2-216ENST00000638794 CALM2P0DP24 149 aa19.4■□□□□ 0.7
SMN2-216ENST00000638794 CALM3P0DP25 149 aa19.4■□□□□ 0.7
SMN2-216ENST00000638794 MKRN4PQ13434 485 aaPredicted RBP19.4■□□□□ 0.7
SMN2-216ENST00000638794 PLEKHG4Q58EX7 1191 aa19.4■□□□□ 0.7
SMN2-216ENST00000638794 UTP14CQ5TAP6 766 aaKnown RBP19.4■□□□□ 0.7
SMN2-216ENST00000638794 GDPD5Q8WTR4 605 aa19.4■□□□□ 0.7
SMN2-216ENST00000638794 PSTPIP2Q9H939 334 aa19.4■□□□□ 0.7
SMN2-216ENST00000638794 ANO2Q9NQ90 1003 aa19.4■□□□□ 0.7
SMN2-216ENST00000638794 SETD4Q9NVD3 440 aa19.4■□□□□ 0.7
SMN2-216ENST00000638794 ZNF215Q9UL58 517 aaPredicted RBP19.4■□□□□ 0.7
SMN2-216ENST00000638794 MTUS1Q9ULD2 1270 aa19.4■□□□□ 0.7
SMN2-216ENST00000638794 LINC01553A4QN01 128 aa19.39■□□□□ 0.69
SMN2-216ENST00000638794 KCNQ1P51787 676 aa19.39■□□□□ 0.69
SMN2-216ENST00000638794 NLRX1Q86UT6 975 aa19.39■□□□□ 0.69
SMN2-216ENST00000638794 OSBPL7Q9BZF2 842 aa19.39■□□□□ 0.69
SMN2-216ENST00000638794 SLC12A7Q9Y666 1083 aa19.39■□□□□ 0.69
SMN2-216ENST00000638794 BRWD1Q9NSI6 2320 aa19.39■□□□□ 0.69
SMN2-216ENST00000638794 ATP9AO75110 1047 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 CAND2O75155 1236 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 GNAT1P11488 350 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 BMP1P13497 986 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 UBE2SQ16763 222 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 AAK1Q2M2I8 961 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 TMTC3Q6ZXV5 915 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 MICU3Q86XE3 530 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 MYOCDQ8IZQ8 938 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 CCDC82Q8N4S0 544 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 FANCBQ8NB91 859 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms