RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 PITPNM1O00562 1244 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 NOP56O00567 594 aaKnown RBP20.33■□□□□ 0.85
PNKP-230ENST00000638016 KCNA2P16389 499 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 RABGGTBP53611 331 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 UTP14CQ5TAP6 766 aaKnown RBP20.33■□□□□ 0.85
PNKP-230ENST00000638016 RETREG2Q8NC44 543 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 CYP2W1Q8TAV3 490 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 PHKBQ93100 1093 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 TIFAQ96CG3 184 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 AGXT2Q9BYV1 514 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 UPF3BQ9BZI7 483 aaKnown RBP20.33■□□□□ 0.85
PNKP-230ENST00000638016 NCOA5Q9HCD5 579 aaKnown RBP20.33■□□□□ 0.85
PNKP-230ENST00000638016 RIC8AQ9NPQ8 531 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 BARHL2Q9NY43 387 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 UBIAD1Q9Y5Z9 338 aa20.33■□□□□ 0.85
PNKP-230ENST00000638016 PTPRSQ13332 1948 aa20.32■□□□□ 0.84
PNKP-230ENST00000638016 ADCY7P51828 1080 aa20.32■□□□□ 0.84
PNKP-230ENST00000638016 RCAN1P53805 252 aa20.32■□□□□ 0.84
PNKP-230ENST00000638016 CCT2P78371 535 aaKnown RBP20.32■□□□□ 0.84
PNKP-230ENST00000638016 BFSP2Q13515 415 aa20.32■□□□□ 0.84
PNKP-230ENST00000638016 TOB2Q14106 344 aaPredicted RBP20.32■□□□□ 0.84
PNKP-230ENST00000638016 NEDD9Q14511 834 aa20.32■□□□□ 0.84
PNKP-230ENST00000638016 PKN1Q16512 942 aa20.32■□□□□ 0.84
PNKP-230ENST00000638016 TCTN1Q2MV58 587 aa20.32■□□□□ 0.84
PNKP-230ENST00000638016 TRIM71Q2Q1W2 868 aaKnown RBP20.32■□□□□ 0.84
PNKP-230ENST00000638016 XRRA1Q6P2D8 792 aa20.32■□□□□ 0.84
PNKP-230ENST00000638016 NLRX1Q86UT6 975 aa20.32■□□□□ 0.84
PNKP-230ENST00000638016 YBX2Q9Y2T7 364 aaKnown RBP20.32■□□□□ 0.84
PNKP-230ENST00000638016 NID2Q14112 1375 aa20.32■□□□□ 0.84
PNKP-230ENST00000638016 SMCO2A6NFE2 343 aa20.31■□□□□ 0.84
PNKP-230ENST00000638016 H3BRB1 525 aa20.31■□□□□ 0.84
PNKP-230ENST00000638016 SMIM10L2AP0DMW4 78 aa20.31■□□□□ 0.84
PNKP-230ENST00000638016 SMIM10L2BP0DMW5 78 aa20.31■□□□□ 0.84
PNKP-230ENST00000638016 MYOGP15173 224 aa20.31■□□□□ 0.84
PNKP-230ENST00000638016 GRIN2CQ14957 1233 aa20.31■□□□□ 0.84
PNKP-230ENST00000638016 PFKFB3Q16875 520 aaPredicted RBP20.31■□□□□ 0.84
PNKP-230ENST00000638016 TRAF7Q6Q0C0 670 aa20.31■□□□□ 0.84
PNKP-230ENST00000638016 LRRC8DQ7L1W4 858 aa20.31■□□□□ 0.84
PNKP-230ENST00000638016 RPUSD2Q8IZ73 545 aaKnown RBP20.31■□□□□ 0.84
PNKP-230ENST00000638016 GPRASP2Q96D09 838 aa20.31■□□□□ 0.84
PNKP-230ENST00000638016 ANO3Q9BYT9 981 aa20.31■□□□□ 0.84
PNKP-230ENST00000638016 TUT1Q9H6E5 874 aaKnown RBP20.31■□□□□ 0.84
PNKP-230ENST00000638016 CKBP12277 381 aa20.3■□□□□ 0.84
PNKP-230ENST00000638016 PSMA5P28066 241 aa20.3■□□□□ 0.84
PNKP-230ENST00000638016 MTMR1Q13613 665 aa20.3■□□□□ 0.84
PNKP-230ENST00000638016 NTRK3Q16288 839 aa20.3■□□□□ 0.84
PNKP-230ENST00000638016 PPP1R18Q6NYC8 613 aa20.3■□□□□ 0.84
PNKP-230ENST00000638016 RUFY3Q7L099 469 aa20.3■□□□□ 0.84
PNKP-230ENST00000638016 CAGE1Q8TC20 777 aa20.3■□□□□ 0.84
PNKP-230ENST00000638016 SENP7Q9BQF6 1050 aa20.3■□□□□ 0.84
PNKP-230ENST00000638016 FTOQ9C0B1 505 aaKnown RBP eCLIP20.3■□□□□ 0.84
PNKP-230ENST00000638016 NKX2-4Q9H2Z4 354 aa20.3■□□□□ 0.84
PNKP-230ENST00000638016 ZSWIM6Q9HCJ5 1215 aa20.3■□□□□ 0.84
PNKP-230ENST00000638016 JADE2Q9NQC1 790 aa20.3■□□□□ 0.84
PNKP-230ENST00000638016 TREHO43280 583 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 NBNO60934 754 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 SCG2P13521 617 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 SELPP16109 830 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 PDIA3P30101 505 aaKnown RBP20.29■□□□□ 0.84
PNKP-230ENST00000638016 CLK2P49760 499 aaKnown RBP20.29■□□□□ 0.84
PNKP-230ENST00000638016 MBTPS1Q14703 1052 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 ZNF618Q5T7W0 954 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 JAKMIP3Q5VZ66 844 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 FBXL16Q8N461 479 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 AFAP1L1Q8TED9 768 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 UIMC1Q96RL1 719 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 ZNF576Q9H609 170 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 SLC4A7Q9Y6M7 1214 aa20.29■□□□□ 0.84
PNKP-230ENST00000638016 GSTTP1A0A1W2PQM5 241 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 DTNBO60941 627 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 PFKMP08237 780 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 ARP10275 920 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 TCF7P36402 384 aaPredicted RBP20.28■□□□□ 0.84
PNKP-230ENST00000638016 RBL2Q08999 1139 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 PTK7Q13308 1070 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 TMCO2Q7Z6W1 182 aaPredicted RBP20.28■□□□□ 0.84
PNKP-230ENST00000638016 CCDC155Q8N6L0 562 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 RASGRP4Q8TDF6 673 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 OSBPL7Q9BZF2 842 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 MTIF3Q9H2K0 278 aaKnown RBP20.28■□□□□ 0.84
PNKP-230ENST00000638016 RNPEPQ9H4A4 650 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 SETD4Q9NVD3 440 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 CHD9Q3L8U1 2897 aa20.28■□□□□ 0.84
PNKP-230ENST00000638016 PRUNE2Q8WUY3 3088 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 CCDC196A0A1B0GTZ2 297 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 C17orf102A2RUQ5 167 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 hCG_1984214I3L0E3 225 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 MARK3P27448 753 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 HOXC8P31273 242 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 RFC2P35250 354 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 SERINC5Q86VE9 423 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 ZNF713Q8N859 430 aaPredicted RBP20.27■□□□□ 0.84
PNKP-230ENST00000638016 ATP6V0A1Q93050 837 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 MXRA8Q9BRK3 442 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 SLC26A6Q9BXS9 759 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 KCNH7Q9NS40 1196 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 KAT6AQ92794 2004 aa20.27■□□□□ 0.84
PNKP-230ENST00000638016 CHD7Q9P2D1 2997 aa20.26■□□□□ 0.83
PNKP-230ENST00000638016 TMEM265A0A087WTH1 108 aa20.26■□□□□ 0.83
PNKP-230ENST00000638016 PRPF3O43395 683 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms