RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 HAUS3Q68CZ6 603 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 GBP6Q6ZN66 633 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 SLFN12Q8IYM2 578 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 SMCR8Q8TEV9 937 aaPredicted RBP14.05□□□□□ -0.16
TCF4-289ENST00000637941 RUFY1Q96T51 708 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 COA1Q9GZY4 146 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 STIM2Q9P246 746 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.05□□□□□ -0.16
TCF4-289ENST00000637941 GRID2IPA4D2P6 1211 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 C6orf229H3BNL8 230 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 HOXA10P31260 410 aaPredicted RBP14.05□□□□□ -0.16
TCF4-289ENST00000637941 PPFIA1Q13136 1202 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 PICALMQ13492 652 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 EDRF1Q3B7T1 1238 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 C10orf76Q5T2E6 689 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 C8orf74Q6P047 294 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 MOXD1Q6UVY6 613 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 SRLQ86TD4 932 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 MTMR8Q96EF0 704 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 CCDC17Q96LX7 622 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 DRC1Q96MC2 740 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 LSM14BQ9BX40 385 aaKnown RBP14.05□□□□□ -0.16
TCF4-289ENST00000637941 ATP6V0A2Q9Y487 856 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 LTBP1Q14766 1721 aa14.05□□□□□ -0.16
TCF4-289ENST00000637941 ZC3H4Q9UPT8 1303 aaKnown RBP14.04□□□□□ -0.16
TCF4-289ENST00000637941 GGCXP38435 758 aa14.04□□□□□ -0.16
TCF4-289ENST00000637941 UBE2SQ16763 222 aa14.04□□□□□ -0.16
TCF4-289ENST00000637941 FAM83BQ5T0W9 1011 aa14.04□□□□□ -0.16
TCF4-289ENST00000637941 HGSNATQ68CP4 663 aa14.04□□□□□ -0.16
TCF4-289ENST00000637941 NFRKBQ6P4R8 1299 aa14.04□□□□□ -0.16
TCF4-289ENST00000637941 KCNK18Q7Z418 384 aa14.04□□□□□ -0.16
TCF4-289ENST00000637941 HAS1Q92839 578 aa14.04□□□□□ -0.16
TCF4-289ENST00000637941 NUDT12Q9BQG2 462 aa14.04□□□□□ -0.16
TCF4-289ENST00000637941 GOLGA6CA6NDK9 693 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 CETN3O15182 167 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 EDIL3O43854 480 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 PPFIA4O75335 1185 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 SSBP05455 408 aaKnown RBP eCLIP14.03□□□□□ -0.16
TCF4-289ENST00000637941 PLA2G4BP0C869 781 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 GOLGA6DP0CG33 693 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 APBA1Q02410 837 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 RASSF7Q02833 373 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 GFPT1Q06210 699 aaPredicted RBP14.03□□□□□ -0.16
TCF4-289ENST00000637941 KCNMA1Q12791 1236 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 AP3B2Q13367 1082 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 LRRC41Q15345 812 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 IFI16Q16666 785 aaKnown RBP14.03□□□□□ -0.16
TCF4-289ENST00000637941 SND1Q7KZF4 910 aaKnown RBP eCLIP14.03□□□□□ -0.16
TCF4-289ENST00000637941 TRIM59Q8IWR1 403 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 IFT20Q8IY31 132 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 ERMNQ8TAM6 284 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 CAVIN3Q969G5 261 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 LRRC1Q9BTT6 524 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 FAM107BQ9H098 131 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 GOLGA6AQ9NYA3 693 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 POLLQ9UGP5 575 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
TCF4-289ENST00000637941 RRP15Q9Y3B9 282 aaKnown RBP14.03□□□□□ -0.16
TCF4-289ENST00000637941 HSF2BPO75031 334 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 ZMYND10O75800 440 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 KRT18P05783 430 aaKnown RBP14.03□□□□□ -0.16
TCF4-289ENST00000637941 SLC1A4P43007 532 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 GTF2IP78347 998 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 NAB2Q15742 525 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 GPBP1Q86WP2 473 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 ZC3H3Q8IXZ2 948 aaKnown RBP14.03□□□□□ -0.16
TCF4-289ENST00000637941 RASSF4Q9H2L5 321 aa14.03□□□□□ -0.16
TCF4-289ENST00000637941 BZW2Q9Y6E2 419 aaKnown RBP14.03□□□□□ -0.16
TCF4-289ENST00000637941 CYP3A7-CYP3A51PA0A087WV96 503 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 BTNL10A8MVZ5 291 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 NKRFO15226 690 aaKnown RBP eCLIP14.02□□□□□ -0.16
TCF4-289ENST00000637941 MYBL2P10244 700 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 CYP3A7P24462 503 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 ANXA13P27216 316 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 EIF6P56537 245 aaKnown RBP14.02□□□□□ -0.16
TCF4-289ENST00000637941 ASIC2Q16515 512 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 SLC18A3Q16572 532 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 HERC4Q5GLZ8 1057 aaPredicted RBP14.02□□□□□ -0.16
TCF4-289ENST00000637941 KLHDC7AQ5VTJ3 777 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 SP8Q8IXZ3 490 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 DCAF4Q8WV16 495 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 EHD4Q9H223 541 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 NLRC4Q9NPP4 1024 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 AIPL1Q9NZN9 384 aa14.02□□□□□ -0.16
TCF4-289ENST00000637941 MYO1CO00159 1063 aa14.02□□□□□ -0.17
TCF4-289ENST00000637941 POLRMTO00411 1230 aaKnown RBP14.02□□□□□ -0.17
TCF4-289ENST00000637941 CES2O00748 559 aa14.02□□□□□ -0.17
TCF4-289ENST00000637941 TBX3O15119 743 aa14.02□□□□□ -0.17
TCF4-289ENST00000637941 PLSCR1O15162 318 aa14.02□□□□□ -0.17
TCF4-289ENST00000637941 SHOX2O60902 331 aaPredicted RBP14.02□□□□□ -0.17
TCF4-289ENST00000637941 EPB41P11171 864 aaKnown RBP14.02□□□□□ -0.17
TCF4-289ENST00000637941 POLR2FP61218 127 aaKnown RBP14.02□□□□□ -0.17
TCF4-289ENST00000637941 DDR1Q08345 913 aa14.02□□□□□ -0.17
TCF4-289ENST00000637941 PAK2Q13177 524 aa14.02□□□□□ -0.17
TCF4-289ENST00000637941 LRRC31Q6UY01 552 aa14.02□□□□□ -0.17
TCF4-289ENST00000637941 GSPT2Q8IYD1 628 aaKnown RBP14.02□□□□□ -0.17
TCF4-289ENST00000637941 TLR10Q9BXR5 811 aa14.02□□□□□ -0.17
TCF4-289ENST00000637941 USP40Q9NVE5 1235 aa14.02□□□□□ -0.17
TCF4-289ENST00000637941 KIAA1024Q9UPX6 916 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms