RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 RNPEPQ9H4A4 650 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 DAXXQ9UER7 740 aaPredicted RBP9.04□□□□□ -0.96
PNKP-229ENST00000637897 SNX14Q9Y5W7 946 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 UBIAD1Q9Y5Z9 338 aa9.04□□□□□ -0.96
PNKP-229ENST00000637897 SIP14410 1827 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 LCHNA4D1U4 455 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 B4DLN1 442 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 STXBP3O00186 592 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 TREHO43280 583 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 CDC45O75419 566 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 SEC24BO95487 1268 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 HSPA4P34932 840 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 ADD1P35611 737 aaKnown RBP9.03□□□□□ -0.96
PNKP-229ENST00000637897 CLK2P49760 499 aaKnown RBP9.03□□□□□ -0.96
PNKP-229ENST00000637897 MRPL12P52815 198 aaKnown RBP9.03□□□□□ -0.96
PNKP-229ENST00000637897 DEFB103AP81534 67 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 NTRK3Q16288 839 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 PKN1Q16512 942 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 ZNF618Q5T7W0 954 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 KRT40Q6A162 431 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 METTL7BQ6UX53 244 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 SERINC5Q86VE9 423 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.03□□□□□ -0.96
PNKP-229ENST00000637897 TMTC2Q8N394 836 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 CRYGNQ8WXF5 182 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 ZBTB10Q96DT7 871 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 RRP36Q96EU6 259 aaKnown RBP9.03□□□□□ -0.96
PNKP-229ENST00000637897 TBC1D32Q96NH3 1257 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 MPHOSPH6Q99547 160 aaKnown RBP9.03□□□□□ -0.96
PNKP-229ENST00000637897 LZTS2Q9BRK4 669 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 AGXT2Q9BYV1 514 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 SLC12A7Q9Y666 1083 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 TRANK1O15050 2925 aa9.03□□□□□ -0.96
PNKP-229ENST00000637897 BRWD1Q9NSI6 2320 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 CCDC69A6NI79 296 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 LPXNO60711 386 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 PPFIA3O75145 1194 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 SMIM10L2AP0DMW4 78 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 SMIM10L2BP0DMW5 78 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 FOSL2P15408 326 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 SELPP16109 830 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 ATP2A2P16615 1042 aaKnown RBP9.02□□□□□ -0.97
PNKP-229ENST00000637897 KIF5BP33176 963 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 WDR5P61964 334 aaKnown RBP9.02□□□□□ -0.97
PNKP-229ENST00000637897 TAP1Q03518 808 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 APOBRQ0VD83 1088 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 PTK7Q13308 1070 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 BRDTQ58F21 947 aaPredicted RBP9.02□□□□□ -0.97
PNKP-229ENST00000637897 NFXL1Q6ZNB6 911 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 LRRC8DQ7L1W4 858 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 RPUSD2Q8IZ73 545 aaKnown RBP9.02□□□□□ -0.97
PNKP-229ENST00000637897 CAGE1Q8TC20 777 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 AFAP1L1Q8TED9 768 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 PSTPIP2Q9H939 334 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 TMEM260Q9NX78 707 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 PCDHA6Q9UN73 950 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 PCDHA8Q9Y5H6 950 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 SLC4A7Q9Y6M7 1214 aa9.02□□□□□ -0.97
PNKP-229ENST00000637897 V9GY48 417 aaPredicted RBP9.02□□□□□ -0.97
PNKP-229ENST00000637897 NID2Q14112 1375 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 KLF18A0A0U1RQI7 1052 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 H3BRB1 525 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 FIBPO43427 364 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 LGR5O75473 907 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 CA3P07451 260 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 PFKMP08237 780 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 ARP10275 920 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 RFC2P35250 354 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 GNAQP50148 359 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 ITGB3BPQ13352 177 aaPredicted RBP9.01□□□□□ -0.97
PNKP-229ENST00000637897 BECN1Q14457 450 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 MARCH8Q5T0T0 291 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 KCNV1Q6PIU1 500 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.01□□□□□ -0.97
PNKP-229ENST00000637897 RUFY4Q6ZNE9 571 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 MICAL3Q7RTP6 2002 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 HERC6Q8IVU3 1022 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 FBXL16Q8N461 479 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 SMARCC2Q8TAQ2 1214 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 SENP7Q9BQF6 1050 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 ANP32EQ9BTT0 268 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 TUT1Q9H6E5 874 aaKnown RBP9.01□□□□□ -0.97
PNKP-229ENST00000637897 CERS4Q9HA82 394 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 MLXIPQ9HAP2 919 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 JADE2Q9NQC1 790 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 SETD4Q9NVD3 440 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 PCDHA11Q9Y5I1 949 aa9.01□□□□□ -0.97
PNKP-229ENST00000637897 COL4A6Q14031 1691 aa9□□□□□ -0.97
PNKP-229ENST00000637897 ZBBXA8MT70 800 aa9□□□□□ -0.97
PNKP-229ENST00000637897 FAM86B1E9PN63 330 aa9□□□□□ -0.97
PNKP-229ENST00000637897 DHX15O43143 795 aaKnown RBP9□□□□□ -0.97
PNKP-229ENST00000637897 ZBTB43O43298 467 aa9□□□□□ -0.97
PNKP-229ENST00000637897 DTNBO60941 627 aa9□□□□□ -0.97
PNKP-229ENST00000637897 STAM2O75886 525 aa9□□□□□ -0.97
PNKP-229ENST00000637897 CCNE2O96020 404 aa9□□□□□ -0.97
PNKP-229ENST00000637897 FAM86B2P0C5J1 330 aa9□□□□□ -0.97
PNKP-229ENST00000637897 CALM1P0DP23 149 aa9□□□□□ -0.97
PNKP-229ENST00000637897 CALM2P0DP24 149 aa9□□□□□ -0.97
PNKP-229ENST00000637897 CALM3P0DP25 149 aa9□□□□□ -0.97
PNKP-229ENST00000637897 EVCP57679 992 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms