RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 HSDL1Q3SXM5 330 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 PRR16Q569H4 304 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 FAM47CQ5HY64 1035 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 MOXD1Q6UVY6 613 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 NEK8Q86SG6 692 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 DIS3L2Q8IYB7 885 aaKnown RBP9.33□□□□□ -0.92
PNKP-226ENST00000636840 C7orf31Q8N865 590 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 AZI2Q9H6S1 392 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 TMEM39AQ9NV64 488 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 SLC9A2Q9UBY0 812 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 ZNF215Q9UL58 517 aaPredicted RBP9.33□□□□□ -0.92
PNKP-226ENST00000636840 NOD1Q9Y239 953 aa9.33□□□□□ -0.92
PNKP-226ENST00000636840 H3BRB1 525 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 IPO5O00410 1097 aaKnown RBP9.32□□□□□ -0.92
PNKP-226ENST00000636840 PQBP1O60828 265 aaKnown RBP9.32□□□□□ -0.92
PNKP-226ENST00000636840 ATP9AO75110 1047 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 HSP90AA1P07900 732 aaKnown RBP9.32□□□□□ -0.92
PNKP-226ENST00000636840 CLTBP09497 229 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 ARP10275 920 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 GNAT1P11488 350 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 KCNA2P16389 499 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 PDCP20941 246 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 PSEN2P49810 448 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 CDK7P50613 346 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 FOSBP53539 338 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 SP4Q02446 784 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 SEMA3FQ13275 785 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 SNX17Q15036 470 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 INF2Q27J81 1249 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 LETM2Q2VYF4 491 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 NBPF20Q3BBV1 942 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 TRIM60Q495X7 471 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 UTP14CQ5TAP6 766 aaKnown RBP9.32□□□□□ -0.92
PNKP-226ENST00000636840 PRPF38BQ5VTL8 546 aaKnown RBP9.32□□□□□ -0.92
PNKP-226ENST00000636840 NFRKBQ6P4R8 1299 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 PIK3AP1Q6ZUJ8 805 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 ANKRD33Q7Z3H0 272 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 HSCBQ8IWL3 235 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 FBXO18Q8NFZ0 1043 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 GLG1Q92896 1179 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 FOXP1Q9H334 677 aaPredicted RBP9.32□□□□□ -0.92
PNKP-226ENST00000636840 SMARCAD1Q9H4L7 1026 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 TUT1Q9H6E5 874 aaKnown RBP9.32□□□□□ -0.92
PNKP-226ENST00000636840 AGO4Q9HCK5 861 aaKnown RBP9.32□□□□□ -0.92
PNKP-226ENST00000636840 JPH1Q9HDC5 661 aaPredicted RBP9.32□□□□□ -0.92
PNKP-226ENST00000636840 PKD2L1Q9P0L9 805 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 LCTP09848 1927 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 KIAA1217Q5T5P2 1943 aa9.32□□□□□ -0.92
PNKP-226ENST00000636840 MYH7BA7E2Y1 1941 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 CYP3A7-CYP3A51PA0A087WV96 503 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 BTBD18B2RXH4 712 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 FAM86B1E9PN63 330 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 M0R2N6 131 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 CCNT1O60563 726 aaKnown RBP9.31□□□□□ -0.92
PNKP-226ENST00000636840 FAM86B2P0C5J1 330 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 RAG1P15918 1043 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 CYP3A7P24462 503 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 GJB2P29033 226 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 TCF7P36402 384 aaPredicted RBP9.31□□□□□ -0.92
PNKP-226ENST00000636840 KRT76Q01546 638 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 GUCY1B3Q02153 619 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 MFSD10Q14728 455 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 KIAA0753Q2KHM9 967 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 Q4G0T1 1027 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 FAM160B1Q5W0V3 765 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 LARP1BQ659C4 914 aaKnown RBP9.31□□□□□ -0.92
PNKP-226ENST00000636840 PPP4R3AQ6IN85 833 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 MIS18BP1Q6P0N0 1132 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 CCDC155Q8N6L0 562 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 SLC43A3Q8NBI5 491 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 CYP2W1Q8TAV3 490 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 CRYGNQ8WXF5 182 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 FAM20AQ96MK3 541 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 RIT2Q99578 217 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 GPR20Q99678 358 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 TEKT3Q9BXF9 490 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 PRDM5Q9NQX1 630 aaPredicted RBP9.31□□□□□ -0.92
PNKP-226ENST00000636840 GJB4Q9NTQ9 266 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 DDX25Q9UHL0 483 aaKnown RBP9.31□□□□□ -0.92
PNKP-226ENST00000636840 NOL7Q9UMY1 257 aaKnown RBP9.31□□□□□ -0.92
PNKP-226ENST00000636840 SAMM50Q9Y512 469 aa9.31□□□□□ -0.92
PNKP-226ENST00000636840 H0YGN5 161 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 K7ELQ4 463 aaPredicted RBP9.3□□□□□ -0.92
PNKP-226ENST00000636840 BACH1O14867 736 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 TBX3O15119 743 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 GAS7O60861 476 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 DTNBO60941 627 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 LGALS2P05162 132 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 PSAPP07602 524 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 HOXD8P13378 290 aaPredicted RBP9.3□□□□□ -0.92
PNKP-226ENST00000636840 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
PNKP-226ENST00000636840 PTGS1P23219 599 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 SLC26A2P50443 739 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 PSMC6P62333 389 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 NR5A1Q13285 461 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 NPY5RQ15761 445 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 MCTP1Q6DN14 999 aa9.3□□□□□ -0.92
PNKP-226ENST00000636840 ZNF746Q6NUN9 644 aaPredicted RBP9.3□□□□□ -0.92
PNKP-226ENST00000636840 SMAP1Q8IYB5 467 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms