RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 HIPK3Q9H422 1215 aa18.57■□□□□ 0.56
CACNA1A-229ENST00000636670 PSTPIP2Q9H939 334 aa18.57■□□□□ 0.56
CACNA1A-229ENST00000636670 CERS4Q9HA82 394 aa18.57■□□□□ 0.56
CACNA1A-229ENST00000636670 SPC25Q9HBM1 224 aa18.57■□□□□ 0.56
CACNA1A-229ENST00000636670 TRANK1O15050 2925 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 RBM47A0AV96 593 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 ADCY6O43306 1168 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 DEXIO95424 95 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 LARGE1O95461 756 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 CA3P07451 260 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 ADCY7P51828 1080 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 SSRP1Q08945 709 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 PGM5Q15124 567 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 ME3Q16798 604 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 TAPT1Q6NXT6 567 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 USP17L6PQ6QN14 398 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 NOL8Q76FK4 1167 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 EEPD1Q7L9B9 569 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 RIC8AQ9NPQ8 531 aa18.56■□□□□ 0.56
CACNA1A-229ENST00000636670 ZBBXA8MT70 800 aa18.55■□□□□ 0.56
CACNA1A-229ENST00000636670 NR3C2P08235 984 aa18.55■□□□□ 0.56
CACNA1A-229ENST00000636670 CCND2P30279 289 aa18.55■□□□□ 0.56
CACNA1A-229ENST00000636670 TNFAIP2Q03169 654 aa18.55■□□□□ 0.56
CACNA1A-229ENST00000636670 STXBP2Q15833 593 aa18.55■□□□□ 0.56
CACNA1A-229ENST00000636670 IQSEC1Q6DN90 963 aa18.55■□□□□ 0.56
CACNA1A-229ENST00000636670 FCHSD1Q86WN1 690 aa18.55■□□□□ 0.56
CACNA1A-229ENST00000636670 FAM177A1Q8N128 213 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-229ENST00000636670 SCFD2Q8WU76 684 aa18.55■□□□□ 0.56
CACNA1A-229ENST00000636670 UPF3AQ9H1J1 476 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-229ENST00000636670 UMODL1Q5DID0 1318 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 EPOPA6NHQ4 379 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 SPDYE3A6NKU9 549 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 CCL23P55773 120 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 AP3B2Q13367 1082 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 UBE2SQ16763 222 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 GNASQ5JWF2 1037 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 FAM178BQ8IXR5 827 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 IL31RAQ8NI17 732 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 ZMYND12Q9H0C1 365 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 EHMT1Q9H9B1 1298 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 SH3GLB2Q9NR46 395 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 LIMCH1Q9UPQ0 1083 aa18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 GNEQ9Y223 722 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-229ENST00000636670 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 SMCO2A6NFE2 343 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 NKRFO15226 690 aaKnown RBP eCLIP18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 ST18O60284 1047 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 EIF3JO75822 258 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 STAM2O75886 525 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 GJA9P57773 515 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 NKX3-2P78367 333 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 IRX5P78411 483 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 DUSP28Q4G0W2 176 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 XRRA1Q6P2D8 792 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 TLK2Q86UE8 772 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 ARNTL2Q8WYA1 636 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 PDGFCQ9NRA1 345 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 Q9Y3F1 56 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 CACNA1AO00555 2505 aa18.53■□□□□ 0.56
CACNA1A-229ENST00000636670 SMPD1P17405 629 aa18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 SSTR3P32745 418 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 CLK2P49760 499 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 FOXK2Q01167 660 aa18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 TTLL4Q14679 1199 aa18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 PCNX4Q63HM2 1172 aa18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 MCTP2Q6DN12 878 aa18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 VSIG10LQ86VR7 867 aa18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 SLC43A3Q8NBI5 491 aa18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 ZSCAN31Q96LW9 406 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 WDR11Q9BZH6 1224 aa18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 C6orf50Q9HD87 102 aa18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 SH2B1Q9NRF2 756 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-229ENST00000636670 SCN10AQ9Y5Y9 1956 aa18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 PPFIA3O75145 1194 aa18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 CTDNEP1O95476 244 aa18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 FOSP01100 380 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 MYCLP12524 364 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 GNA11P29992 359 aa18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 ST3GAL1Q11201 340 aa18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 GRB10Q13322 594 aa18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 NECAB1Q8N987 351 aa18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 BICD2Q8TD16 824 aa18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 NOC4LQ9BVI4 516 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 ANO3Q9BYT9 981 aa18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 VPS54Q9P1Q0 977 aa18.51■□□□□ 0.55
CACNA1A-229ENST00000636670 PFKMP08237 780 aa18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 TAP1Q03518 808 aa18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 GNPTABQ3T906 1256 aa18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 KCNV1Q6PIU1 500 aa18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 REXO1Q8N1G1 1221 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 NSUN7Q8NE18 718 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 WASF1Q92558 559 aa18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 INPP4AQ96PE3 977 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 SEZ6LQ9BYH1 1024 aa18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 WNT8AQ9H1J5 351 aa18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 LMCD1Q9NZU5 365 aa18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 PCDHA6Q9UN73 950 aa18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 PCDHA8Q9Y5H6 950 aa18.5■□□□□ 0.55
CACNA1A-229ENST00000636670 BRWD1Q9NSI6 2320 aa18.49■□□□□ 0.55
CACNA1A-229ENST00000636670 CABYRO75952 493 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms