RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 ARMC5Q96C12 935 aa9.67□□□□□ -0.86
CDKL5-209ENST00000635828 CCDC85CA6NKD9 419 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 ADAMTS4O75173 837 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 CIITAP33076 1130 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 TECP42680 631 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 DUSP28Q4G0W2 176 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 ABHD8Q96I13 439 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 UNC45AQ9H3U1 944 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 XPNPEP3Q9NQH7 507 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 CAPN15O75808 1086 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 AKR1A1P14550 325 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 USP11P51784 963 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 HIC1Q14526 733 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 UGCGQ16739 394 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 CXCL17Q6UXB2 119 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 VTA1Q9NP79 307 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 KCNMB3Q9NPA1 279 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 TRIP12Q14669 1992 aaPredicted RBP9.66□□□□□ -0.86
CDKL5-209ENST00000635828 UNC80Q8N2C7 3258 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 CYP3A7-CYP3A51PA0A087WV96 503 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 RBM47A0AV96 593 aaKnown RBP9.66□□□□□ -0.86
CDKL5-209ENST00000635828 PDCP20941 246 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 CYP3A7P24462 503 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 MARK3P27448 753 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 SPIRE1Q08AE8 756 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 ARHGEF6Q15052 776 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 ECM1Q16610 540 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 CELF3Q5SZQ8 465 aaKnown RBP9.66□□□□□ -0.86
CDKL5-209ENST00000635828 LRRC15Q8TF66 581 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 SCFD2Q8WU76 684 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 SPATA33Q96N06 139 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 MTMR9Q96QG7 549 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 PCYT2Q99447 389 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.66□□□□□ -0.86
CDKL5-209ENST00000635828 FAM184BQ9ULE4 1060 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 CEP290O15078 2479 aa9.66□□□□□ -0.86
CDKL5-209ENST00000635828 FIBPO43427 364 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 NEMFO60524 1076 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 PTPAQ15257 358 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 OR6J1Q8NGC5 347 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 MBOAT7Q96N66 472 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 PLIN2Q99541 437 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 RGL1Q9NZL6 768 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 GSTTP1A0A1W2PQM5 241 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 PSMD10O75832 226 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 PRMT2P55345 433 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 TTLL4Q14679 1199 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 KCNA10Q16322 511 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 Q4G0T1 1027 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 GNASQ5JWF2 1037 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 PPP4R3AQ6IN85 833 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 DHX37Q8IY37 1157 aaKnown RBP9.65□□□□□ -0.86
CDKL5-209ENST00000635828 TNS4Q8IZW8 715 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 IL27Q8NEV9 243 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 TTC12Q9H892 705 aaPredicted RBP9.65□□□□□ -0.86
CDKL5-209ENST00000635828 VAV3Q9UKW4 847 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 KIF3AQ9Y496 699 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 VCANP13611 3396 aa9.65□□□□□ -0.86
CDKL5-209ENST00000635828 COL6A3P12111 3177 aa9.65□□□□□ -0.87
CDKL5-209ENST00000635828 CYP4A11Q02928 519 aa9.65□□□□□ -0.87
CDKL5-209ENST00000635828 LRRC41Q15345 812 aa9.65□□□□□ -0.87
CDKL5-209ENST00000635828 CALCRLQ16602 461 aa9.65□□□□□ -0.87
CDKL5-209ENST00000635828 UTP14CQ5TAP6 766 aaKnown RBP9.65□□□□□ -0.87
CDKL5-209ENST00000635828 GLT8D2Q9H1C3 349 aa9.65□□□□□ -0.87
CDKL5-209ENST00000635828 MLXIPQ9HAP2 919 aa9.65□□□□□ -0.87
CDKL5-209ENST00000635828 POLD4Q9HCU8 107 aa9.65□□□□□ -0.87
CDKL5-209ENST00000635828 RARBP10826 455 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 ATN1P54259 1190 aaPredicted RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 PKN2Q16513 984 aaKnown RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 LRCH2Q5VUJ6 765 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 CCSAPQ6IQ19 270 aaPredicted RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 CCDC60Q8IWA6 550 aaPredicted RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 MSL3Q8N5Y2 521 aaKnown RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 SAMD3Q8N6K7 520 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 BANK1Q8NDB2 785 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 GPR20Q99678 358 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 VWA3AA6NCI4 1184 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 ASGR1P07306 291 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 MMP3P08254 477 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 NCLP19338 710 aaKnown RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 ATP4AP20648 1035 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 ICAM3P32942 547 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 TCF7P36402 384 aaPredicted RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 IQSEC1Q6DN90 963 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 SLC5A5Q92911 643 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 TNPO1Q92973 898 aaKnown RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 GPRASP2Q96D09 838 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 RNPEPQ9H4A4 650 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 GRIN2DO15399 1336 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 SGPL1O95470 568 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 TFRCP02786 760 aaKnown RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 ACTR2P61160 394 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 ZNF200P98182 395 aaPredicted RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 NCAPH2Q6IBW4 605 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 ZNF579Q8NAF0 562 aaKnown RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 KAT2BQ92831 832 aa9.64□□□□□ -0.87
CDKL5-209ENST00000635828 JPH1Q9HDC5 661 aaPredicted RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 BMP2KQ9NSY1 1161 aaPredicted RBP9.64□□□□□ -0.87
CDKL5-209ENST00000635828 DUSP11O75319 330 aaKnown RBP9.63□□□□□ -0.87
CDKL5-209ENST00000635828 FSCN1Q16658 493 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms