RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 LY6KQ17RY6 165 aa16.93■□□□□ 0.3
HSPG2-214ENST00000635682 MCTP2Q6DN12 878 aa16.93■□□□□ 0.3
HSPG2-214ENST00000635682 BICD2Q8TD16 824 aa16.93■□□□□ 0.3
HSPG2-214ENST00000635682 PDCD2LQ9BRP1 358 aa16.93■□□□□ 0.3
HSPG2-214ENST00000635682 SLC28A3Q9HAS3 691 aa16.93■□□□□ 0.3
HSPG2-214ENST00000635682 FAM217BQ9NTX9 383 aaPredicted RBP16.93■□□□□ 0.3
HSPG2-214ENST00000635682 ST18O60284 1047 aa16.92■□□□□ 0.3
HSPG2-214ENST00000635682 KPNA6O60684 536 aa16.92■□□□□ 0.3
HSPG2-214ENST00000635682 DEXIO95424 95 aa16.92■□□□□ 0.3
HSPG2-214ENST00000635682 FOSP01100 380 aaPredicted RBP16.92■□□□□ 0.3
HSPG2-214ENST00000635682 XRRA1Q6P2D8 792 aa16.92■□□□□ 0.3
HSPG2-214ENST00000635682 CCDC62Q6P9F0 684 aa16.92■□□□□ 0.3
HSPG2-214ENST00000635682 NLRX1Q86UT6 975 aa16.92■□□□□ 0.3
HSPG2-214ENST00000635682 AFG1LQ8WV93 481 aa16.92■□□□□ 0.3
HSPG2-214ENST00000635682 WASF1Q92558 559 aa16.92■□□□□ 0.3
HSPG2-214ENST00000635682 RIC8AQ9NPQ8 531 aa16.92■□□□□ 0.3
HSPG2-214ENST00000635682 TET1Q8NFU7 2136 aa16.91■□□□□ 0.3
HSPG2-214ENST00000635682 STXBP3O00186 592 aa16.91■□□□□ 0.3
HSPG2-214ENST00000635682 FUT2Q10981 343 aa16.91■□□□□ 0.3
HSPG2-214ENST00000635682 UBE2SQ16763 222 aa16.91■□□□□ 0.3
HSPG2-214ENST00000635682 NFRKBQ6P4R8 1299 aa16.91■□□□□ 0.3
HSPG2-214ENST00000635682 CHD7Q9P2D1 2997 aa16.91■□□□□ 0.3
HSPG2-214ENST00000635682 SPTBN5Q9NRC6 3674 aaKnown RBP16.91■□□□□ 0.3
HSPG2-214ENST00000635682 MYH7BA7E2Y1 1941 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 KIAA1217Q5T5P2 1943 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 MEIS2O14770 477 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 PFKFB2O60825 505 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 PPFIA3O75145 1194 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 GH1P01241 217 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 ATP2A2P16615 1042 aaKnown RBP16.9■□□□□ 0.3
HSPG2-214ENST00000635682 NLRP5P59047 1200 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 ARHGAP1Q07960 439 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 AP3B2Q13367 1082 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 RABEP1Q15276 862 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 RETREG2Q8NC44 543 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 IL27Q8NEV9 243 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 IL17RAQ96F46 866 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 TPCN1Q9ULQ1 816 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 PCDHA6Q9UN73 950 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 NOD1Q9Y239 953 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 PCDHA8Q9Y5H6 950 aa16.9■□□□□ 0.3
HSPG2-214ENST00000635682 RBAK-RBAKDNI3L0D1 243 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 MMP3P08254 477 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 IQCF3P0C7M6 154 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 ZNF76P36508 570 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 RBM25P49756 843 aaKnown RBP16.89■□□□□ 0.29
HSPG2-214ENST00000635682 SCRN1Q12765 414 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 PCNX4Q63HM2 1172 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 PPP2R2DQ66LE6 453 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 VSIG10LQ86VR7 867 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 DHX37Q8IY37 1157 aaKnown RBP16.89■□□□□ 0.29
HSPG2-214ENST00000635682 REXO1Q8N1G1 1221 aaKnown RBP16.89■□□□□ 0.29
HSPG2-214ENST00000635682 CDHR1Q96JP9 859 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 ZSCAN31Q96LW9 406 aaPredicted RBP16.89■□□□□ 0.29
HSPG2-214ENST00000635682 FTOQ9C0B1 505 aaKnown RBP eCLIP16.89■□□□□ 0.29
HSPG2-214ENST00000635682 SH3GLB2Q9NR46 395 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 LIMCH1Q9UPQ0 1083 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 PCDHA11Q9Y5I1 949 aa16.89■□□□□ 0.29
HSPG2-214ENST00000635682 ESYT2A0FGR8 921 aa16.88■□□□□ 0.29
HSPG2-214ENST00000635682 PFKMP08237 780 aa16.88■□□□□ 0.29
HSPG2-214ENST00000635682 TGFB3P10600 412 aa16.88■□□□□ 0.29
HSPG2-214ENST00000635682 PTPN11Q06124 597 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-214ENST00000635682 NTRK3Q16288 839 aa16.88■□□□□ 0.29
HSPG2-214ENST00000635682 PTGISQ16647 500 aa16.88■□□□□ 0.29
HSPG2-214ENST00000635682 GDF6Q6KF10 455 aaPredicted RBP16.88■□□□□ 0.29
HSPG2-214ENST00000635682 KAT2BQ92831 832 aa16.88■□□□□ 0.29
HSPG2-214ENST00000635682 MLXIPQ9HAP2 919 aa16.88■□□□□ 0.29
HSPG2-214ENST00000635682 RTEL1Q9NZ71 1219 aa16.88■□□□□ 0.29
HSPG2-214ENST00000635682 DDX41Q9UJV9 622 aaKnown RBP16.88■□□□□ 0.29
HSPG2-214ENST00000635682 RFXAPO00287 272 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 FIBPO43427 364 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 SORBS3O60504 671 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 ACTN1P12814 892 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 BFSP2Q13515 415 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 LAMC2Q13753 1193 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 TRIM29Q14134 588 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 TJAP1Q5JTD0 557 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 FAM177A1Q8N128 213 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-214ENST00000635682 SYMPKQ92797 1274 aaKnown RBP16.87■□□□□ 0.29
HSPG2-214ENST00000635682 ZFP91Q96JP5 570 aaPredicted RBP16.87■□□□□ 0.29
HSPG2-214ENST00000635682 CTAGE1Q96RT6 745 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 ALG1Q9BT22 464 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 ANO3Q9BYT9 981 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 CERS4Q9HA82 394 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 BRMS1Q9HCU9 246 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 VPS54Q9P1Q0 977 aa16.87■□□□□ 0.29
HSPG2-214ENST00000635682 PITPNM1O00562 1244 aa16.86■□□□□ 0.29
HSPG2-214ENST00000635682 NOP56O00567 594 aaKnown RBP16.86■□□□□ 0.29
HSPG2-214ENST00000635682 RFC2P35250 354 aa16.86■□□□□ 0.29
HSPG2-214ENST00000635682 NEDD9Q14511 834 aa16.86■□□□□ 0.29
HSPG2-214ENST00000635682 PKN1Q16512 942 aa16.86■□□□□ 0.29
HSPG2-214ENST00000635682 JAKMIP3Q5VZ66 844 aa16.86■□□□□ 0.29
HSPG2-214ENST00000635682 MICALL1Q8N3F8 863 aa16.86■□□□□ 0.29
HSPG2-214ENST00000635682 GIMAP8Q8ND71 665 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-214ENST00000635682 IL31RAQ8NI17 732 aa16.86■□□□□ 0.29
HSPG2-214ENST00000635682 GTF3C6Q969F1 213 aa16.86■□□□□ 0.29
HSPG2-214ENST00000635682 ZMYND12Q9H0C1 365 aa16.86■□□□□ 0.29
HSPG2-214ENST00000635682 SH2B1Q9NRF2 756 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-214ENST00000635682 ORC3Q9UBD5 711 aaPredicted RBP16.86■□□□□ 0.29
HSPG2-214ENST00000635682 TCEAL9Q9UHQ7 104 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms