RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 FGFR1OP2Q9NVK5 253 aa12.63□□□□□ -0.39
COL11A1-211ENST00000635193 SGK1O00141 431 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 PCYT1AP49585 367 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 XKR9Q5GH70 373 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 JDP2Q8WYK2 163 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 CCDC138Q96M89 665 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 CDCA7Q9BWT1 371 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-211ENST00000635193 CPSF1Q10570 1443 aaKnown RBP12.62□□□□□ -0.39
COL11A1-211ENST00000635193 ANO9A1A5B4 782 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 PLCG1P19174 1290 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-211ENST00000635193 BEND6Q5SZJ8 279 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-211ENST00000635193 FBXO11Q86XK2 927 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 TBCKQ8TEA7 893 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 TEKT3Q9BXF9 490 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 KCNF1Q9H3M0 494 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 GPHNQ9NQX3 736 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-211ENST00000635193 BATF3Q9NR55 127 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 CCNL1Q9UK58 526 aaPredicted RBP12.62□□□□□ -0.39
COL11A1-211ENST00000635193 MAD1L1Q9Y6D9 718 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 GOLGA8QA0A0J9YX86 632 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 GOLGA8OA6NCC3 632 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 CFAP73A6NFT4 308 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 GOLGA8NF8WBI6 632 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 HNRNPCP07910 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
COL11A1-211ENST00000635193 DEUP1Q05D60 604 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 GSPT2Q8IYD1 628 aaKnown RBP12.62□□□□□ -0.39
COL11A1-211ENST00000635193 CHURC1Q8WUH1 139 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 ANKRD7Q92527 254 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 DTNBP1Q96EV8 351 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 GCNT4Q9P109 453 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 LRRN2O75325 713 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 POLR2MP0CAP2 368 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 TTBK2Q6IQ55 1244 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 PI16Q6UXB8 463 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 NT5C1BQ96P26 610 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 GJB4Q9NTQ9 266 aa12.62□□□□□ -0.39
COL11A1-211ENST00000635193 PRKAB2O43741 272 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 PTPREP23469 700 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 POLR2BP30876 1174 aaKnown RBP12.61□□□□□ -0.39
COL11A1-211ENST00000635193 BPIFB4P59827 614 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 RSBN1LQ6PCB5 846 aaPredicted RBP12.61□□□□□ -0.39
COL11A1-211ENST00000635193 KIF2CQ99661 725 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 CARD10Q9BWT7 1032 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 PITPNM3Q9BZ71 974 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 CCDC188H7C350 402 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 PSMD2Q13200 908 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 FBXW10Q5XX13 1052 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 CDKL2Q92772 493 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 TRIM11Q96F44 468 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 SCYL1Q96KG9 808 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 C8orf37Q96NL8 207 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 OLFM3Q96PB7 478 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 PICK1Q9NRD5 415 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 TMOD4Q9NZQ9 345 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 GINS2Q9Y248 185 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 PCDHA1Q9Y5I3 950 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 SLC4A7Q9Y6M7 1214 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 hCG_2014768A0A024R1R8 64 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 EIF4E1BA6NMX2 242 aaKnown RBP12.61□□□□□ -0.39
COL11A1-211ENST00000635193 BTDP43251 543 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 NRBF2Q96F24 287 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 DISC1Q9NRI5 854 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 GDAQ9Y2T3 454 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 THRAP3Q9Y2W1 955 aaKnown RBP12.61□□□□□ -0.39
COL11A1-211ENST00000635193 PRAMEF22A3QJZ6 481 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 GPC4O75487 556 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 GAP43P17677 238 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 CNGA1P29973 690 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 GARSP41250 739 aaKnown RBP12.61□□□□□ -0.39
COL11A1-211ENST00000635193 RWDD2BP57060 319 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 ARL6IP4Q66PJ3 421 aaKnown RBP12.61□□□□□ -0.39
COL11A1-211ENST00000635193 SLC30A9Q6PML9 568 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 TRIM50Q86XT4 487 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 LCORLQ8N3X6 602 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 THOC1Q96FV9 657 aaKnown RBP12.61□□□□□ -0.39
COL11A1-211ENST00000635193 ATG3Q9NT62 314 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 ADGRG1Q9Y653 693 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 MAP3K15Q6ZN16 1313 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 UBAP1LF5GYI3 381 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 H7C0C1 242 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 CYP2E1P05181 493 aaPredicted RBP12.61□□□□□ -0.39
COL11A1-211ENST00000635193 EEF1B2P24534 225 aaKnown RBP12.61□□□□□ -0.39
COL11A1-211ENST00000635193 ATP5OP48047 213 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 LRRC63Q05C16 580 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 DMP1Q13316 513 aaPredicted RBP12.61□□□□□ -0.39
COL11A1-211ENST00000635193 C16orf87Q6PH81 154 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 SYT2Q8N9I0 419 aaPredicted RBP12.61□□□□□ -0.39
COL11A1-211ENST00000635193 EMILIN3Q9NT22 766 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 ADAMTS1Q9UHI8 967 aa12.61□□□□□ -0.39
COL11A1-211ENST00000635193 LGALS16A8MUM7 142 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 H0YCG3 227 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 CLIC2O15247 247 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 MEFVO15553 781 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-211ENST00000635193 HOXA7P31268 230 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-211ENST00000635193 CA8P35219 290 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 GTF2IP78347 998 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 DRP2Q13474 957 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 CUL4BQ13620 913 aa12.6□□□□□ -0.39
COL11A1-211ENST00000635193 LLGL1Q15334 1064 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms