RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 HAS1Q92839 578 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 ARMC5Q96C12 935 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 TRIM44Q96DX7 344 aaPredicted RBP16.3■□□□□ 0.2
LINC00339-208ENST00000634934 MTMR9Q96QG7 549 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 RCOR1Q9UKL0 485 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 MCM3APO60318 1980 aa16.3■□□□□ 0.2
LINC00339-208ENST00000634934 TBX3O15119 743 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 SORBS3O60504 671 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 ATP9AO75110 1047 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 HMGCRP04035 888 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
LINC00339-208ENST00000634934 ADCYAP1R1P41586 468 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 MTFR1Q15390 333 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 LY6KQ17RY6 165 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 KCNV1Q6PIU1 500 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 KCNG4Q8TDN1 519 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 SLC5A5Q92911 643 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 ZNF333Q96JL9 665 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 FAM20AQ96MK3 541 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 MYH15Q9Y2K3 1946 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
LINC00339-208ENST00000634934 GAS7O60861 476 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 ARIH2O95376 493 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 INHAP05111 366 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 ZNF865P0CJ78 1059 aaPredicted RBP16.29■□□□□ 0.2
LINC00339-208ENST00000634934 TGFB3P10600 412 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 PRKAR2AP13861 404 aaKnown RBP16.29■□□□□ 0.2
LINC00339-208ENST00000634934 ME1P48163 572 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 SP2Q02086 613 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 CACNB2Q08289 660 aaPredicted RBP16.29■□□□□ 0.2
LINC00339-208ENST00000634934 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
LINC00339-208ENST00000634934 CCDC144BQ3MJ40 725 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 TPRNQ4KMQ1 711 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 LRCH2Q5VUJ6 765 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 DTHD1Q6ZMT9 781 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 SDF4Q9BRK5 362 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 TTC12Q9H892 705 aaPredicted RBP16.29■□□□□ 0.2
LINC00339-208ENST00000634934 NRBP1Q9UHY1 535 aa16.29■□□□□ 0.2
LINC00339-208ENST00000634934 DDX41Q9UJV9 622 aaKnown RBP16.29■□□□□ 0.2
LINC00339-208ENST00000634934 LRRC37A2A6NM11 1700 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.28■□□□□ 0.2
LINC00339-208ENST00000634934 RBM47A0AV96 593 aaKnown RBP16.28■□□□□ 0.2
LINC00339-208ENST00000634934 VWA3AA6NCI4 1184 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 KCNA2P16389 499 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 UBA1P22314 1058 aaKnown RBP16.28■□□□□ 0.2
LINC00339-208ENST00000634934 CNGA1P29973 690 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 PRPHP41219 470 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 TECP42680 631 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 TMEM266Q2M3C6 531 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 TMEM63BQ5T3F8 832 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 ARL6IP4Q66PJ3 421 aaKnown RBP16.28■□□□□ 0.2
LINC00339-208ENST00000634934 IQSEC1Q6DN90 963 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 KRI1Q8N9T8 703 aaKnown RBP16.28■□□□□ 0.2
LINC00339-208ENST00000634934 TRPV1Q8NER1 839 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 RIT2Q99578 217 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 TEKT3Q9BXF9 490 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 TBC1D22BQ9NU19 505 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 FAM184BQ9ULE4 1060 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 PCDHA12Q9UN75 941 aa16.28■□□□□ 0.2
LINC00339-208ENST00000634934 CHMP2AO43633 222 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 PPP6R2O75170 966 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 GGPS1O95749 300 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 CYBAP13498 195 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 TERF1P54274 439 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 SOX10P56693 466 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 SP4Q02446 784 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 TNFAIP2Q03169 654 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 NEDD9Q14511 834 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 IL17AQ16552 155 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 CSPP1Q1MSJ5 1256 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 LRSAM1Q6UWE0 723 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 CYFIP1Q7L576 1253 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 COPS5Q92905 334 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 SYAP1Q96A49 352 aaPredicted RBP16.27■□□□□ 0.2
LINC00339-208ENST00000634934 FERMT2Q96AC1 680 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 CLIC6Q96NY7 704 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 SENP7Q9BQF6 1050 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 BCAS3Q9H6U6 928 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 TCEAL9Q9UHQ7 104 aa16.27■□□□□ 0.2
LINC00339-208ENST00000634934 FBXO2Q9UK22 296 aaPredicted RBP16.27■□□□□ 0.2
LINC00339-208ENST00000634934 SRPRBQ9Y5M8 271 aaKnown RBP16.27■□□□□ 0.2
LINC00339-208ENST00000634934 DHX15O43143 795 aaKnown RBP16.26■□□□□ 0.19
LINC00339-208ENST00000634934 PSMD10O75832 226 aa16.26■□□□□ 0.19
LINC00339-208ENST00000634934 SMPD1P17405 629 aa16.26■□□□□ 0.19
LINC00339-208ENST00000634934 GRIN1Q05586 938 aa16.26■□□□□ 0.19
LINC00339-208ENST00000634934 GJC2Q5T442 439 aaPredicted RBP16.26■□□□□ 0.19
LINC00339-208ENST00000634934 DHX37Q8IY37 1157 aaKnown RBP16.26■□□□□ 0.19
LINC00339-208ENST00000634934 GIMAP8Q8ND71 665 aaPredicted RBP16.26■□□□□ 0.19
LINC00339-208ENST00000634934 GPT2Q8TD30 523 aa16.26■□□□□ 0.19
LINC00339-208ENST00000634934 UNC93B1Q9H1C4 597 aa16.26■□□□□ 0.19
LINC00339-208ENST00000634934 MLXIPQ9HAP2 919 aa16.26■□□□□ 0.19
LINC00339-208ENST00000634934 JPH1Q9HDC5 661 aaPredicted RBP16.26■□□□□ 0.19
LINC00339-208ENST00000634934 PCDHA7Q9UN72 937 aa16.26■□□□□ 0.19
LINC00339-208ENST00000634934 NFASCO94856 1347 aa16.26■□□□□ 0.19
LINC00339-208ENST00000634934 AKR1A1P14550 325 aa16.25■□□□□ 0.19
LINC00339-208ENST00000634934 PTGS1P23219 599 aa16.25■□□□□ 0.19
LINC00339-208ENST00000634934 CCND3P30281 292 aaPredicted RBP16.25■□□□□ 0.19
LINC00339-208ENST00000634934 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC00339-208ENST00000634934 DUSP28Q4G0W2 176 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms