RNA–Protein interactions for RNA: ENST00000634308.1

ATP7B-211, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 4,321 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-211ENST00000634308 COA7Q96BR5 231 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 PIGSQ96S52 555 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 RAB17Q9H0T7 212 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 AGPAT5Q9NUQ2 364 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 IRAK4Q9NWZ3 460 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 NKIRAS1Q9NYS0 192 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 LIMA1Q9UHB6 759 aaKnown RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 ANO9A1A5B4 782 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 MEFVO15553 781 aaPredicted RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 EXOC3O60645 756 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 IFNAR2P48551 515 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 CYP4A11Q02928 519 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 MECOMQ03112 1051 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 PFKFB3Q16875 520 aaPredicted RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 ALS2CLQ60I27 953 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 TMC4Q7Z404 712 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 UBL4BQ8N7F7 174 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 CALR3Q96L12 384 aaKnown RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 NAP1L4Q99733 375 aaKnown RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 CD248Q9HCU0 757 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 TFRCP02786 760 aaKnown RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 CLTAP09496 248 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 NR2F2P24468 414 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 TRIM28Q13263 835 aaKnown RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 DIXDC1Q155Q3 683 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 EXOC3L4Q17RC7 722 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 MAP3K14Q99558 947 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 PSTPIP2Q9H939 334 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 DDX25Q9UHL0 483 aaKnown RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 LRRC53A6NM62 1247 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 LACTBP83111 547 aaPredicted RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 ZBTB16Q05516 673 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 MKRN3Q13064 507 aaKnown RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 MFSD14BQ5SR56 506 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 ANKRD42Q8N9B4 389 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 SLC10A4Q96EP9 437 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 AP1M1Q9BXS5 423 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 ACTR5Q9H9F9 607 aaPredicted RBP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 PRM3Q9NNZ6 103 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.57□□□□□ -0.72
ATP7B-211ENST00000634308 COL4A3BPQ9Y5P4 624 aa10.57□□□□□ -0.72
ATP7B-211ENST00000634308 SETSIPP0DME0 302 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 PRDX5P30044 214 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 PCK1P35558 622 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 TOB1P50616 345 aaPredicted RBP10.56□□□□□ -0.72
ATP7B-211ENST00000634308 CYP2J2P51589 502 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 LLGL1Q15334 1064 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 SUPT20HL1Q3ZLR7 823 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 PRR16Q569H4 304 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 RSRC2Q7L4I2 434 aaKnown RBP10.56□□□□□ -0.72
ATP7B-211ENST00000634308 RPUSD2Q8IZ73 545 aaKnown RBP10.56□□□□□ -0.72
ATP7B-211ENST00000634308 HPS3Q969F9 1004 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 OSBPL9Q96SU4 736 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 LRRC1Q9BTT6 524 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 VIPAS39Q9H9C1 493 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 ATP8A1Q9Y2Q0 1164 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 GFPT1Q06210 699 aaPredicted RBP10.56□□□□□ -0.72
ATP7B-211ENST00000634308 NFIXQ14938 502 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 TNS4Q8IZW8 715 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 SRBD1Q8N5C6 995 aaKnown RBP10.56□□□□□ -0.72
ATP7B-211ENST00000634308 ZNF804BA4D1E1 1349 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 FCER1AP12319 257 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 PABPC4Q13310 644 aaKnown RBP eCLIP10.56□□□□□ -0.72
ATP7B-211ENST00000634308 SETDB1Q15047 1291 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 INTS8Q75QN2 995 aaKnown RBP10.56□□□□□ -0.72
ATP7B-211ENST00000634308 SPATA4Q8NEY3 305 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 KCND1Q9NSA2 647 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 CAPN11Q9UMQ6 739 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 IVNS1ABPQ9Y6Y0 642 aa10.56□□□□□ -0.72
ATP7B-211ENST00000634308 ERVV-1B6SEH8 477 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 PALMO75781 387 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 BTDP43251 543 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 VPS41P49754 854 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 DHX9Q08211 1270 aaKnown RBP10.55□□□□□ -0.72
ATP7B-211ENST00000634308 TCP10Q12799 353 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 TPH2Q8IWU9 490 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 CAMKK2Q96RR4 588 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.55□□□□□ -0.72
ATP7B-211ENST00000634308 IKBKGQ9Y6K9 419 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 ITSN1Q15811 1721 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 RPS6KA5O75582 802 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 RCAN1P53805 252 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 CRYMQ14894 314 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 RC3H1Q5TC82 1133 aaKnown RBP10.55□□□□□ -0.72
ATP7B-211ENST00000634308 LMNTD2Q8IXW0 634 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 SLC44A5Q8NCS7 719 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 RIC8AQ9NPQ8 531 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 RNF14Q9UBS8 474 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 RGS17Q9UGC6 210 aaPredicted RBP10.55□□□□□ -0.72
ATP7B-211ENST00000634308 NOVA2Q9UNW9 492 aaKnown RBP10.55□□□□□ -0.72
ATP7B-211ENST00000634308 STK38LQ9Y2H1 464 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 KDM3AQ9Y4C1 1321 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 PPP1R3GB7ZBB8 358 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 PGRMC1O00264 195 aaKnown RBP10.55□□□□□ -0.72
ATP7B-211ENST00000634308 MAP2K7O14733 419 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 EIF3HO15372 352 aaKnown RBP eCLIP10.55□□□□□ -0.724e-7■■■□□ 18
ATP7B-211ENST00000634308 KRT5P13647 590 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 HUNKP57058 714 aa10.55□□□□□ -0.72
ATP7B-211ENST00000634308 ERVK-24P63145 666 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms