RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 V9GY48 417 aaPredicted RBP12.37□□□□□ -0.43
CHD2-217ENST00000629136 UNC80Q8N2C7 3258 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 TMEM265A0A087WTH1 108 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 ATP9AO75110 1047 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 FGBP02675 491 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 IQCF3P0C7M6 154 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 KCNA2P16389 499 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 PSMA5P28066 241 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 HOXC8P31273 242 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 PBX2P40425 430 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 TOB2Q14106 344 aaPredicted RBP12.36□□□□□ -0.43
CHD2-217ENST00000629136 NEDD9Q14511 834 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 NTRK3Q16288 839 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 PFKFB3Q16875 520 aaPredicted RBP12.36□□□□□ -0.43
CHD2-217ENST00000629136 DEFB128Q7Z7B8 93 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 NLRX1Q86UT6 975 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 C7orf31Q8N865 590 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 CAGE1Q8TC20 777 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 WNT8BQ93098 351 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 GPRASP2Q96D09 838 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 GPR20Q99678 358 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 SENP7Q9BQF6 1050 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 PBX4Q9BYU1 374 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 UBIAD1Q9Y5Z9 338 aa12.36□□□□□ -0.43
CHD2-217ENST00000629136 H3BRB1 525 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 RBAK-RBAKDNI3L0D1 243 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 NOP56O00567 594 aaKnown RBP12.35□□□□□ -0.43
CHD2-217ENST00000629136 PFKMP08237 780 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 RFC2P35250 354 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 ADCY7P51828 1080 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 EVCP57679 992 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 ZNF200P98182 395 aaPredicted RBP12.35□□□□□ -0.43
CHD2-217ENST00000629136 BFSP2Q13515 415 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 GPNMBQ14956 572 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 PKN1Q16512 942 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 TRIM71Q2Q1W2 868 aaKnown RBP12.35□□□□□ -0.43
CHD2-217ENST00000629136 RUFY3Q7L099 469 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 TRIM50Q86XT4 487 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 RPUSD2Q8IZ73 545 aaKnown RBP12.35□□□□□ -0.43
CHD2-217ENST00000629136 AFAP1L1Q8TED9 768 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 PHKBQ93100 1093 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 ANO3Q9BYT9 981 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 SEMA6BQ9H3T3 888 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 TUT1Q9H6E5 874 aaKnown RBP12.35□□□□□ -0.43
CHD2-217ENST00000629136 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 TMEM260Q9NX78 707 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 MYH9P35579 1960 aaKnown RBP12.35□□□□□ -0.43
CHD2-217ENST00000629136 CHD7Q9P2D1 2997 aa12.35□□□□□ -0.43
CHD2-217ENST00000629136 NLRC5Q86WI3 1866 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 CCDC196A0A1B0GTZ2 297 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 SMCO2A6NFE2 343 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 ADAMTS3O15072 1205 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 CKBP12277 381 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 SCG2P13521 617 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 SP4Q02446 784 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 PTK7Q13308 1070 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 AP3B2Q13367 1082 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 MTMR1Q13613 665 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 TRAF7Q6Q0C0 670 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 LRRC8DQ7L1W4 858 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 CCDC155Q8N6L0 562 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 CDHR1Q96JP9 859 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 CDX2Q99626 313 aaPredicted RBP12.34□□□□□ -0.43
CHD2-217ENST00000629136 MTIF3Q9H2K0 278 aaKnown RBP12.34□□□□□ -0.43
CHD2-217ENST00000629136 EHMT1Q9H9B1 1298 aa12.34□□□□□ -0.43
CHD2-217ENST00000629136 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
CHD2-217ENST00000629136 ESYT2A0FGR8 921 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 PRPF3O43395 683 aaKnown RBP12.33□□□□□ -0.44
CHD2-217ENST00000629136 PPFIA3O75145 1194 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 SMIM10L2AP0DMW4 78 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 SMIM10L2BP0DMW5 78 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 SELPP16109 830 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
CHD2-217ENST00000629136 TCF7P36402 384 aaPredicted RBP12.33□□□□□ -0.44
CHD2-217ENST00000629136 SREBF1P36956 1147 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 RETREG2Q8NC44 543 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 GIMAP8Q8ND71 665 aaPredicted RBP12.33□□□□□ -0.44
CHD2-217ENST00000629136 CYP2W1Q8TAV3 490 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 CRYGNQ8WXF5 182 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 MYLIPQ8WY64 445 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 TIFAQ96CG3 184 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 MXRA8Q9BRK3 442 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 RNF26Q9BY78 433 aaPredicted RBP12.33□□□□□ -0.44
CHD2-217ENST00000629136 UPF3BQ9BZI7 483 aaKnown RBP12.33□□□□□ -0.44
CHD2-217ENST00000629136 TM6SF1Q9BZW5 370 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 ZMYND12Q9H0C1 365 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 RNPEPQ9H4A4 650 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 JADE2Q9NQC1 790 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 PKD2L1Q9P0L9 805 aa12.33□□□□□ -0.44
CHD2-217ENST00000629136 PRUNE2Q8WUY3 3088 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 REV3LO60673 3130 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 GSTTP1A0A1W2PQM5 241 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 C17orf102A2RUQ5 167 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 ZBBXA8MT70 800 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 TREHO43280 583 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 NBNO60934 754 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 FOSP01100 380 aaPredicted RBP12.32□□□□□ -0.44
CHD2-217ENST00000629136 CXCL10P02778 98 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 IFNAR1P17181 557 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms