RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 SUPT20HL2P0C7V6 817 aa23.58■■□□□ 1.37
CIRBP-246ENST00000628979 SREBF1P36956 1147 aa23.58■■□□□ 1.37
CIRBP-246ENST00000628979 FXR1P51114 621 aaKnown RBP eCLIP23.58■■□□□ 1.37
CIRBP-246ENST00000628979 ARHGAP4P98171 946 aa23.58■■□□□ 1.37
CIRBP-246ENST00000628979 KIAA0753Q2KHM9 967 aa23.58■■□□□ 1.37
CIRBP-246ENST00000628979 UTP14CQ5TAP6 766 aaKnown RBP23.58■■□□□ 1.37
CIRBP-246ENST00000628979 MFSD5Q6N075 450 aa23.58■■□□□ 1.37
CIRBP-246ENST00000628979 C7orf31Q8N865 590 aa23.58■■□□□ 1.37
CIRBP-246ENST00000628979 GIMAP8Q8ND71 665 aaPredicted RBP23.58■■□□□ 1.37
CIRBP-246ENST00000628979 SENP7Q9BQF6 1050 aa23.58■■□□□ 1.37
CIRBP-246ENST00000628979 C22orf23Q9BZE7 217 aa23.58■■□□□ 1.37
CIRBP-246ENST00000628979 SH3GLB2Q9NR46 395 aa23.58■■□□□ 1.37
CIRBP-246ENST00000628979 NOD1Q9Y239 953 aa23.58■■□□□ 1.37
CIRBP-246ENST00000628979 UMODL1Q5DID0 1318 aa23.58■■□□□ 1.36
CIRBP-246ENST00000628979 LARGE1O95461 756 aa23.57■■□□□ 1.36
CIRBP-246ENST00000628979 KCNA2P16389 499 aa23.57■■□□□ 1.36
CIRBP-246ENST00000628979 CCL23P55773 120 aa23.57■■□□□ 1.36
CIRBP-246ENST00000628979 PTPN11Q06124 597 aaPredicted RBP23.57■■□□□ 1.36
CIRBP-246ENST00000628979 ME3Q16798 604 aa23.57■■□□□ 1.36
CIRBP-246ENST00000628979 TMEM199Q8N511 208 aa23.57■■□□□ 1.36
CIRBP-246ENST00000628979 GPR20Q99678 358 aa23.57■■□□□ 1.36
CIRBP-246ENST00000628979 HDAC6Q9UBN7 1215 aa23.57■■□□□ 1.36
CIRBP-246ENST00000628979 MAFGO15525 162 aa23.56■■□□□ 1.36
CIRBP-246ENST00000628979 LGALS2P05162 132 aa23.56■■□□□ 1.36
CIRBP-246ENST00000628979 ARP10275 920 aa23.56■■□□□ 1.36
CIRBP-246ENST00000628979 HOXD8P13378 290 aaPredicted RBP23.56■■□□□ 1.36
CIRBP-246ENST00000628979 EPHB4P54760 987 aa23.56■■□□□ 1.36
CIRBP-246ENST00000628979 SHHQ15465 462 aa23.56■■□□□ 1.36
CIRBP-246ENST00000628979 PTGISQ16647 500 aa23.56■■□□□ 1.36
CIRBP-246ENST00000628979 CEP55Q53EZ4 464 aa23.56■■□□□ 1.36
CIRBP-246ENST00000628979 C9orf50Q5SZB4 431 aa23.56■■□□□ 1.36
CIRBP-246ENST00000628979 MCTP2Q6DN12 878 aa23.56■■□□□ 1.36
CIRBP-246ENST00000628979 C16orf70Q9BSU1 422 aa23.56■■□□□ 1.36
CIRBP-246ENST00000628979 NOC4LQ9BVI4 516 aaKnown RBP23.56■■□□□ 1.36
CIRBP-246ENST00000628979 KCNH7Q9NS40 1196 aa23.56■■□□□ 1.36
CIRBP-246ENST00000628979 F2P00734 622 aa23.55■■□□□ 1.36
CIRBP-246ENST00000628979 CSF2RAP15509 400 aa23.55■■□□□ 1.36
CIRBP-246ENST00000628979 GDF6Q6KF10 455 aaPredicted RBP23.55■■□□□ 1.36
CIRBP-246ENST00000628979 UIMC1Q96RL1 719 aa23.55■■□□□ 1.36
CIRBP-246ENST00000628979 H3BRB1 525 aa23.54■■□□□ 1.36
CIRBP-246ENST00000628979 HAS3O00219 553 aa23.54■■□□□ 1.36
CIRBP-246ENST00000628979 SOX1O00570 391 aaPredicted RBP23.54■■□□□ 1.36
CIRBP-246ENST00000628979 CTDNEP1O95476 244 aa23.54■■□□□ 1.36
CIRBP-246ENST00000628979 ACRP10323 421 aa23.54■■□□□ 1.36
CIRBP-246ENST00000628979 PPIGQ13427 754 aaKnown RBP eCLIP23.54■■□□□ 1.363e-9■■■□□ 14.7
CIRBP-246ENST00000628979 PLA2G4DQ86XP0 818 aa23.54■■□□□ 1.36
CIRBP-246ENST00000628979 GTF3C6Q969F1 213 aa23.54■■□□□ 1.36
CIRBP-246ENST00000628979 TUT1Q9H6E5 874 aaKnown RBP23.54■■□□□ 1.36
CIRBP-246ENST00000628979 PCDHA4Q9UN74 947 aa23.54■■□□□ 1.36
CIRBP-246ENST00000628979 KCNJ14Q9UNX9 436 aa23.54■■□□□ 1.36
CIRBP-246ENST00000628979 RANBP2P49792 3224 aaKnown RBP23.54■■□□□ 1.36
CIRBP-246ENST00000628979 SESTD1Q86VW0 696 aa23.53■■□□□ 1.36
CIRBP-246ENST00000628979 TRIM50Q86XT4 487 aa23.53■■□□□ 1.36
CIRBP-246ENST00000628979 SCLYQ96I15 445 aa23.53■■□□□ 1.36
CIRBP-246ENST00000628979 SDF4Q9BRK5 362 aa23.53■■□□□ 1.36
CIRBP-246ENST00000628979 AGO4Q9HCK5 861 aaKnown RBP23.53■■□□□ 1.36
CIRBP-246ENST00000628979 ORC3Q9UBD5 711 aaPredicted RBP23.53■■□□□ 1.36
CIRBP-246ENST00000628979 GTF2IRD1Q9UHL9 959 aa23.53■■□□□ 1.36
CIRBP-246ENST00000628979 FAM86B1E9PN63 330 aa23.52■■□□□ 1.36
CIRBP-246ENST00000628979 MEIS1O00470 390 aa23.52■■□□□ 1.36
CIRBP-246ENST00000628979 CYP3A4P08684 503 aa23.52■■□□□ 1.36
CIRBP-246ENST00000628979 FAM86B2P0C5J1 330 aa23.52■■□□□ 1.36
CIRBP-246ENST00000628979 TCF7P36402 384 aaPredicted RBP23.52■■□□□ 1.36
CIRBP-246ENST00000628979 BLIDQ8IZY5 108 aa23.52■■□□□ 1.36
CIRBP-246ENST00000628979 SEPT1Q8WYJ6 367 aa23.52■■□□□ 1.36
CIRBP-246ENST00000628979 LRCH3Q96II8 777 aa23.52■■□□□ 1.36
CIRBP-246ENST00000628979 WNT8AQ9H1J5 351 aa23.52■■□□□ 1.36
CIRBP-246ENST00000628979 SLC9A2Q9UBY0 812 aa23.52■■□□□ 1.36
CIRBP-246ENST00000628979 STK36Q9NRP7 1315 aa23.52■■□□□ 1.36
CIRBP-246ENST00000628979 GSTTP1A0A1W2PQM5 241 aa23.51■■□□□ 1.35
CIRBP-246ENST00000628979 DDX39AO00148 427 aaKnown RBP23.51■■□□□ 1.35
CIRBP-246ENST00000628979 XBP1P17861 261 aa23.51■■□□□ 1.35
CIRBP-246ENST00000628979 ZNF200P98182 395 aaPredicted RBP23.51■■□□□ 1.35
CIRBP-246ENST00000628979 RETREG2Q8NC44 543 aa23.51■■□□□ 1.35
CIRBP-246ENST00000628979 KIF2CQ99661 725 aa23.51■■□□□ 1.35
CIRBP-246ENST00000628979 UPF2Q9HAU5 1272 aaKnown RBP23.51■■□□□ 1.35
CIRBP-246ENST00000628979 JPH1Q9HDC5 661 aaPredicted RBP23.51■■□□□ 1.35
CIRBP-246ENST00000628979 ITGB3BPQ13352 177 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-246ENST00000628979 LRIT3Q3SXY7 679 aa23.5■■□□□ 1.35
CIRBP-246ENST00000628979 NIPA1Q7RTP0 329 aa23.5■■□□□ 1.35
CIRBP-246ENST00000628979 CRYGNQ8WXF5 182 aa23.5■■□□□ 1.35
CIRBP-246ENST00000628979 RNPC3Q96LT9 517 aaKnown RBP23.5■■□□□ 1.35
CIRBP-246ENST00000628979 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.5■■□□□ 1.356e-8■■□□□ 12
CIRBP-246ENST00000628979 GJB4Q9NTQ9 266 aa23.5■■□□□ 1.35
CIRBP-246ENST00000628979 ZNF215Q9UL58 517 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-246ENST00000628979 LIMCH1Q9UPQ0 1083 aa23.5■■□□□ 1.35
CIRBP-246ENST00000628979 TRIP12Q14669 1992 aaPredicted RBP23.49■■□□□ 1.35
CIRBP-246ENST00000628979 C17orf102A2RUQ5 167 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 SMIM10L2AP0DMW4 78 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 SMIM10L2BP0DMW5 78 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 FOSBP53539 338 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 BFSP2Q13515 415 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 HIC1Q14526 733 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 PRR16Q569H4 304 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 C16orf59Q7L2K0 433 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 TBCKQ8TEA7 893 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 WASF1Q92558 559 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 GLG1Q92896 1179 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 IL23AQ9NPF7 189 aa23.49■■□□□ 1.35
CIRBP-246ENST00000628979 NFASCO94856 1347 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms