RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ATG2AQ2TAZ0 1938 aa17.08■□□□□ 0.32
PNKP-218ENST00000625299 WDFY4Q6ZS81 3184 aa17.07■□□□□ 0.32
PNKP-218ENST00000625299 H3BRB1 525 aa17.07■□□□□ 0.32
PNKP-218ENST00000625299 OPLAHO14841 1288 aa17.07■□□□□ 0.32
PNKP-218ENST00000625299 CTNNB1P35222 781 aa17.07■□□□□ 0.32
PNKP-218ENST00000625299 NHLH1Q02575 133 aa17.07■□□□□ 0.32
PNKP-218ENST00000625299 PGM5Q15124 567 aa17.07■□□□□ 0.32
PNKP-218ENST00000625299 RPAINQ86UA6 219 aa17.07■□□□□ 0.32
PNKP-218ENST00000625299 GPKOWQ92917 476 aaPredicted RBP eCLIP17.07■□□□□ 0.32
PNKP-218ENST00000625299 FBXL18Q96ME1 805 aa17.07■□□□□ 0.32
PNKP-218ENST00000625299 TUT1Q9H6E5 874 aaKnown RBP17.07■□□□□ 0.32
PNKP-218ENST00000625299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.06■□□□□ 0.32
PNKP-218ENST00000625299 NOP56O00567 594 aaKnown RBP17.06■□□□□ 0.32
PNKP-218ENST00000625299 LGALS2P05162 132 aa17.06■□□□□ 0.32
PNKP-218ENST00000625299 CCND2P30279 289 aa17.06■□□□□ 0.32
PNKP-218ENST00000625299 FCHSD1Q86WN1 690 aa17.06■□□□□ 0.32
PNKP-218ENST00000625299 STAG2Q8N3U4 1231 aa17.06■□□□□ 0.32
PNKP-218ENST00000625299 PRKAG3Q9UGI9 489 aa17.06■□□□□ 0.32
PNKP-218ENST00000625299 PCDHA1Q9Y5I3 950 aa17.06■□□□□ 0.32
PNKP-218ENST00000625299 C5orf42Q9H799 3197 aa17.06■□□□□ 0.32
PNKP-218ENST00000625299 DOCK5Q9H7D0 1870 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 POTEB3A0JP26 581 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 PPP1R11O60927 126 aaPredicted RBP17.05■□□□□ 0.32
PNKP-218ENST00000625299 POTEBQ6S5H4 581 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 VSIG10LQ86VR7 867 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 HOMER1Q86YM7 354 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 ADHFE1Q8IWW8 467 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 FIBCD1Q8N539 461 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 ANKS1AQ92625 1134 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 UBAC1Q9BSL1 405 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 RNPEPQ9H4A4 650 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 BCAS3Q9H6U6 928 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 SETD4Q9NVD3 440 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 ZSWIM5Q9P217 1185 aa17.05■□□□□ 0.32
PNKP-218ENST00000625299 COL4A6Q14031 1691 aa17.04■□□□□ 0.32
PNKP-218ENST00000625299 SDSP20132 328 aa17.04■□□□□ 0.32
PNKP-218ENST00000625299 IRS1P35568 1242 aa17.04■□□□□ 0.32
PNKP-218ENST00000625299 IFIT1BQ5T764 474 aaKnown RBP17.04■□□□□ 0.32
PNKP-218ENST00000625299 CWC27Q6UX04 472 aaKnown RBP17.04■□□□□ 0.32
PNKP-218ENST00000625299 STOX1Q6ZVD7 989 aa17.04■□□□□ 0.32
PNKP-218ENST00000625299 HFE2Q6ZVN8 426 aa17.04■□□□□ 0.32
PNKP-218ENST00000625299 IL17RAQ96F46 866 aa17.04■□□□□ 0.32
PNKP-218ENST00000625299 UPF3BQ9BZI7 483 aaKnown RBP17.04■□□□□ 0.32
PNKP-218ENST00000625299 MUTYHQ9UIF7 546 aa17.04■□□□□ 0.32
PNKP-218ENST00000625299 C19orf67A6NJJ6 358 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 KLRF2D3W0D1 207 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 GCOM1H8Y6P7 765 aaPredicted RBP17.03■□□□□ 0.32
PNKP-218ENST00000625299 ZBTB5O15062 677 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 CAND2O75155 1236 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 POLR2MP0CAP2 368 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 TGFB3P10600 412 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 HOXC8P31273 242 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 NT5C2P49902 561 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 ARHGAP4P98171 946 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 GHRHRQ02643 423 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 UTP14CQ5TAP6 766 aaKnown RBP17.03■□□□□ 0.32
PNKP-218ENST00000625299 TICAM2Q86XR7 235 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 TRIM50Q86XT4 487 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 APBB2Q92870 758 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 LNPKQ9C0E8 428 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 IGFLR1Q9H665 355 aa17.03■□□□□ 0.32
PNKP-218ENST00000625299 MAP3K20Q9NYL2 800 aaKnown RBP17.03■□□□□ 0.32
PNKP-218ENST00000625299 ZNF318Q5VUA4 2279 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 GRM6O15303 877 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 GNAT1P11488 350 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 LTBRP36941 435 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 SP4Q02446 784 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 DLX2Q07687 328 aaPredicted RBP17.02■□□□□ 0.32
PNKP-218ENST00000625299 HYAL1Q12794 435 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 COL19A1Q14993 1142 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.32
PNKP-218ENST00000625299 CYFIP1Q7L576 1253 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 C11orf84Q9BUA3 381 aaPredicted RBP17.02■□□□□ 0.32
PNKP-218ENST00000625299 KRT23Q9C075 422 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 KCNH6Q9H252 994 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 DIAPH3Q9NSV4 1193 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 SUPT16HQ9Y5B9 1047 aaKnown RBP17.02■□□□□ 0.32
PNKP-218ENST00000625299 KAT6AQ92794 2004 aa17.02■□□□□ 0.32
PNKP-218ENST00000625299 ADGRA3Q8IWK6 1321 aa17.01■□□□□ 0.31
PNKP-218ENST00000625299 BAZ2BQ9UIF8 2168 aaKnown RBP17.01■□□□□ 0.31
PNKP-218ENST00000625299 NCK2O43639 380 aa17.01■□□□□ 0.31
PNKP-218ENST00000625299 GHRP10912 638 aa17.01■□□□□ 0.31
PNKP-218ENST00000625299 GNPTABQ3T906 1256 aa17.01■□□□□ 0.31
PNKP-218ENST00000625299 MFSD14AQ96MC6 490 aa17.01■□□□□ 0.31
PNKP-218ENST00000625299 POP1Q99575 1024 aaKnown RBP17.01■□□□□ 0.31
PNKP-218ENST00000625299 USP26Q9BXU7 913 aa17.01■□□□□ 0.31
PNKP-218ENST00000625299 MAD2L2Q9UI95 211 aa17.01■□□□□ 0.31
PNKP-218ENST00000625299 ZNF215Q9UL58 517 aaPredicted RBP17.01■□□□□ 0.31
PNKP-218ENST00000625299 MBTPS2O43462 519 aa17■□□□□ 0.31
PNKP-218ENST00000625299 RB1P06400 928 aa17■□□□□ 0.31
PNKP-218ENST00000625299 GTF2F1P35269 517 aaKnown RBP eCLIP17■□□□□ 0.31
PNKP-218ENST00000625299 BMPR1AP36894 532 aa17■□□□□ 0.31
PNKP-218ENST00000625299 NEDD9Q14511 834 aa17■□□□□ 0.31
PNKP-218ENST00000625299 SMAD2Q15796 467 aaKnown RBP17■□□□□ 0.31
PNKP-218ENST00000625299 METTL7BQ6UX53 244 aa17■□□□□ 0.31
PNKP-218ENST00000625299 LMBR1Q8WVP7 490 aa17■□□□□ 0.31
PNKP-218ENST00000625299 MTMR8Q96EF0 704 aa17■□□□□ 0.31
PNKP-218ENST00000625299 PIGSQ96S52 555 aa17■□□□□ 0.31
PNKP-218ENST00000625299 GPR20Q99678 358 aa17■□□□□ 0.31
PNKP-218ENST00000625299 LMAN2LQ9H0V9 348 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms