RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 SMIM10L2AP0DMW4 78 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 SMIM10L2BP0DMW5 78 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 KCNA5P22460 613 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 CCND2P30279 289 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 NT5C2P49902 561 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 TMEM31Q5JXX7 168 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 VSIG10LQ86VR7 867 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 TRIM50Q86XT4 487 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 PIBF1Q8WXW3 757 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 ATP6V0A1Q93050 837 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 KMT2EQ8IZD2 1858 aa12.71□□□□□ -0.37
LINC00963-214ENST00000622680 TECTAO75443 2155 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 C17orf102A2RUQ5 167 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 PALM3A6NDB9 673 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-214ENST00000622680 H3BRB1 525 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 HIP1O00291 1037 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 CYTH3O43739 400 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 PPFIA4O75335 1185 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 UPP2O95045 317 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 AMHP03971 560 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 IL9P15248 144 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 HOXC8P31273 242 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 HTRA4P83105 476 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-214ENST00000622680 GRM4Q14833 912 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 PLEKHG4Q58EX7 1191 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 KCNV1Q6PIU1 500 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-214ENST00000622680 TUT1Q9H6E5 874 aaKnown RBP12.7□□□□□ -0.38
LINC00963-214ENST00000622680 MLXIPQ9HAP2 919 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 CTNNA3Q9UI47 895 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 HCN4Q9Y3Q4 1203 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 INSL6Q9Y581 213 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 TAF6LQ9Y6J9 622 aa12.7□□□□□ -0.38
LINC00963-214ENST00000622680 FRMPD4Q14CM0 1322 aa12.69□□□□□ -0.38
LINC00963-214ENST00000622680 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.69□□□□□ -0.38
LINC00963-214ENST00000622680 GCOM1H8Y6P7 765 aaPredicted RBP12.69□□□□□ -0.38
LINC00963-214ENST00000622680 POLR2MP0CAP2 368 aa12.69□□□□□ -0.38
LINC00963-214ENST00000622680 MRPS9P82933 396 aaKnown RBP12.69□□□□□ -0.38
LINC00963-214ENST00000622680 SP4Q02446 784 aa12.69□□□□□ -0.38
LINC00963-214ENST00000622680 SEMA3FQ13275 785 aa12.69□□□□□ -0.38
LINC00963-214ENST00000622680 EPC2Q52LR7 807 aa12.69□□□□□ -0.38
LINC00963-214ENST00000622680 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.69□□□□□ -0.38
LINC00963-214ENST00000622680 EXOC6Q8TAG9 804 aa12.69□□□□□ -0.38
LINC00963-214ENST00000622680 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
LINC00963-214ENST00000622680 RNPEPQ9H4A4 650 aa12.69□□□□□ -0.38
LINC00963-214ENST00000622680 RIOX1Q9H6W3 641 aa12.69□□□□□ -0.38
LINC00963-214ENST00000622680 SUPT16HQ9Y5B9 1047 aaKnown RBP12.69□□□□□ -0.38
LINC00963-214ENST00000622680 MYO10Q9HD67 2058 aa12.68□□□□□ -0.38
LINC00963-214ENST00000622680 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-214ENST00000622680 H3BQ06 376 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-214ENST00000622680 NOP56O00567 594 aaKnown RBP12.68□□□□□ -0.38
LINC00963-214ENST00000622680 LEXMQ3ZCV2 418 aa12.68□□□□□ -0.38
LINC00963-214ENST00000622680 PTCRAQ6ISU1 281 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-214ENST00000622680 CYFIP1Q7L576 1253 aa12.68□□□□□ -0.38
LINC00963-214ENST00000622680 FAM178BQ8IXR5 827 aa12.68□□□□□ -0.38
LINC00963-214ENST00000622680 MRPL38Q96DV4 380 aaKnown RBP12.68□□□□□ -0.38
LINC00963-214ENST00000622680 YME1L1Q96TA2 773 aa12.68□□□□□ -0.38
LINC00963-214ENST00000622680 SETD4Q9NVD3 440 aa12.68□□□□□ -0.38
LINC00963-214ENST00000622680 MAP3K20Q9NYL2 800 aaKnown RBP12.68□□□□□ -0.38
LINC00963-214ENST00000622680 RTEL1Q9NZ71 1219 aa12.68□□□□□ -0.38
LINC00963-214ENST00000622680 IFIT3O14879 490 aaKnown RBP12.67□□□□□ -0.38
LINC00963-214ENST00000622680 CYP21A2P08686 494 aa12.67□□□□□ -0.38
LINC00963-214ENST00000622680 TGFB3P10600 412 aa12.67□□□□□ -0.38
LINC00963-214ENST00000622680 GSPT1P15170 499 aaKnown RBP12.67□□□□□ -0.38
LINC00963-214ENST00000622680 PDE4AP27815 886 aa12.67□□□□□ -0.38
LINC00963-214ENST00000622680 SSTR3P32745 418 aaPredicted RBP12.67□□□□□ -0.38
LINC00963-214ENST00000622680 PTH1RQ03431 593 aa12.67□□□□□ -0.38
LINC00963-214ENST00000622680 UTP14CQ5TAP6 766 aaKnown RBP12.67□□□□□ -0.38
LINC00963-214ENST00000622680 LMBR1Q8WVP7 490 aa12.67□□□□□ -0.38
LINC00963-214ENST00000622680 SEPT8Q92599 483 aa12.67□□□□□ -0.38
LINC00963-214ENST00000622680 INPP4AQ96PE3 977 aaPredicted RBP12.67□□□□□ -0.38
LINC00963-214ENST00000622680 GPR20Q99678 358 aa12.67□□□□□ -0.38
LINC00963-214ENST00000622680 IFIH1Q9BYX4 1025 aaKnown RBP12.67□□□□□ -0.38
LINC00963-214ENST00000622680 ZDBF2Q9HCK1 2354 aa12.67□□□□□ -0.38
LINC00963-214ENST00000622680 PNMA6FA0A0J9YX94 578 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 PI4K2BG5E9Z4 385 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 GPR37L1O60883 481 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 CSPG5O95196 566 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
LINC00963-214ENST00000622680 ARHGAP4P98171 946 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 TROAPQ12815 778 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 TRDNQ13061 729 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 GPM6BQ13491 265 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 WTAPQ15007 396 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 GNPTABQ3T906 1256 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 TIGD5Q53EQ6 642 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 TCEAL5Q5H9L2 206 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 METTL7BQ6UX53 244 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 EP400NLQ6ZTU2 488 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 TMEM192Q8IY95 271 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 GJD3Q8N144 294 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 SAMD3Q8N6K7 520 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 TOP1MTQ969P6 601 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 MYL10Q9BUA6 226 aa12.66□□□□□ -0.38
LINC00963-214ENST00000622680 ERICH2A1L162 156 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 GRXCR2A6NFK2 248 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 SPATA31C2B4DYI2 1134 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 E7EWF7 191 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 H3BNC9 293 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 ICAM3P32942 547 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms