RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 COL4A6Q14031 1691 aa18.12■□□□□ 0.49
SNHG28-203ENST00000621242 KDM4AO75164 1064 aa18.12■□□□□ 0.49
SNHG28-203ENST00000621242 IRS1P35568 1242 aa18.12■□□□□ 0.49
SNHG28-203ENST00000621242 PDE1AP54750 535 aa18.12■□□□□ 0.49
SNHG28-203ENST00000621242 HFE2Q6ZVN8 426 aa18.12■□□□□ 0.49
SNHG28-203ENST00000621242 RPAINQ86UA6 219 aa18.12■□□□□ 0.49
SNHG28-203ENST00000621242 IQCA1Q86XH1 822 aa18.12■□□□□ 0.49
SNHG28-203ENST00000621242 ZFP91Q96JP5 570 aaPredicted RBP18.12■□□□□ 0.49
SNHG28-203ENST00000621242 RNPEPQ9H4A4 650 aa18.12■□□□□ 0.49
SNHG28-203ENST00000621242 ZBTB47Q9UFB7 747 aaPredicted RBP18.12■□□□□ 0.49
SNHG28-203ENST00000621242 BAZ2BQ9UIF8 2168 aaKnown RBP18.12■□□□□ 0.49
SNHG28-203ENST00000621242 H3BRB1 525 aa18.11■□□□□ 0.49
SNHG28-203ENST00000621242 ZNF213O14771 459 aa18.11■□□□□ 0.49
SNHG28-203ENST00000621242 PARP1P09874 1014 aaKnown RBP18.11■□□□□ 0.49
SNHG28-203ENST00000621242 SMIM10L2AP0DMW4 78 aa18.11■□□□□ 0.49
SNHG28-203ENST00000621242 SMIM10L2BP0DMW5 78 aa18.11■□□□□ 0.49
SNHG28-203ENST00000621242 UBA1P22314 1058 aaKnown RBP18.11■□□□□ 0.49
SNHG28-203ENST00000621242 HOXC8P31273 242 aa18.11■□□□□ 0.49
SNHG28-203ENST00000621242 CCDC178Q5BJE1 867 aa18.11■□□□□ 0.49
SNHG28-203ENST00000621242 STOX1Q6ZVD7 989 aa18.11■□□□□ 0.49
SNHG28-203ENST00000621242 VSIG10LQ86VR7 867 aa18.11■□□□□ 0.49
SNHG28-203ENST00000621242 GPKOWQ92917 476 aaPredicted RBP eCLIP18.11■□□□□ 0.49
SNHG28-203ENST00000621242 AMNQ9BXJ7 453 aa18.11■□□□□ 0.49
SNHG28-203ENST00000621242 IFIH1Q9BYX4 1025 aaKnown RBP18.11■□□□□ 0.49
SNHG28-203ENST00000621242 TUT1Q9H6E5 874 aaKnown RBP18.11■□□□□ 0.49
SNHG28-203ENST00000621242 BCAS3Q9H6U6 928 aa18.11■□□□□ 0.49
SNHG28-203ENST00000621242 MLXIPQ9HAP2 919 aa18.11■□□□□ 0.49
SNHG28-203ENST00000621242 CENPBP07199 599 aaPredicted RBP18.1■□□□□ 0.49
SNHG28-203ENST00000621242 GHRHRQ02643 423 aa18.1■□□□□ 0.49
SNHG28-203ENST00000621242 DLX2Q07687 328 aaPredicted RBP18.1■□□□□ 0.49
SNHG28-203ENST00000621242 PGM5Q15124 567 aa18.1■□□□□ 0.49
SNHG28-203ENST00000621242 CLUL1Q15846 466 aa18.1■□□□□ 0.49
SNHG28-203ENST00000621242 IL31RAQ8NI17 732 aa18.1■□□□□ 0.49
SNHG28-203ENST00000621242 ZSCAN10Q96SZ4 725 aaPredicted RBP18.1■□□□□ 0.49
SNHG28-203ENST00000621242 UPF3BQ9BZI7 483 aaKnown RBP18.1■□□□□ 0.49
SNHG28-203ENST00000621242 USP34Q70CQ2 3546 aa18.1■□□□□ 0.49
SNHG28-203ENST00000621242 B4E1Z4 1266 aa18.09■□□□□ 0.49
SNHG28-203ENST00000621242 NCK2O43639 380 aa18.09■□□□□ 0.49
SNHG28-203ENST00000621242 LGALS2P05162 132 aa18.09■□□□□ 0.49
SNHG28-203ENST00000621242 HOXA13P31271 388 aaPredicted RBP18.09■□□□□ 0.49
SNHG28-203ENST00000621242 CTNNB1P35222 781 aa18.09■□□□□ 0.49
SNHG28-203ENST00000621242 SMAD2Q15796 467 aaKnown RBP18.09■□□□□ 0.49
SNHG28-203ENST00000621242 CTC1Q2NKJ3 1217 aa18.09■□□□□ 0.49
SNHG28-203ENST00000621242 TICAM2Q86XR7 235 aa18.09■□□□□ 0.49
SNHG28-203ENST00000621242 STAG2Q8N3U4 1231 aa18.09■□□□□ 0.49
SNHG28-203ENST00000621242 FIBCD1Q8N539 461 aa18.09■□□□□ 0.49
SNHG28-203ENST00000621242 ENAHQ8N8S7 591 aaPredicted RBP18.09■□□□□ 0.49
SNHG28-203ENST00000621242 IL17RAQ96F46 866 aa18.09■□□□□ 0.49
SNHG28-203ENST00000621242 MAP3K20Q9NYL2 800 aaKnown RBP18.09■□□□□ 0.49
SNHG28-203ENST00000621242 MUTYHQ9UIF7 546 aa18.09■□□□□ 0.49
SNHG28-203ENST00000621242 TRIM6-TRIM34B2RNG4 842 aa18.08■□□□□ 0.48
SNHG28-203ENST00000621242 GRM6O15303 877 aa18.08■□□□□ 0.48
SNHG28-203ENST00000621242 MBTPS2O43462 519 aa18.08■□□□□ 0.48
SNHG28-203ENST00000621242 PPP1R11O60927 126 aaPredicted RBP18.08■□□□□ 0.48
SNHG28-203ENST00000621242 CAND2O75155 1236 aa18.08■□□□□ 0.48
SNHG28-203ENST00000621242 TGFB3P10600 412 aa18.08■□□□□ 0.48
SNHG28-203ENST00000621242 HYAL1Q12794 435 aa18.08■□□□□ 0.48
SNHG28-203ENST00000621242 APBB2Q92870 758 aa18.08■□□□□ 0.48
SNHG28-203ENST00000621242 MFSD14AQ96MC6 490 aa18.08■□□□□ 0.48
SNHG28-203ENST00000621242 SETD4Q9NVD3 440 aa18.08■□□□□ 0.48
SNHG28-203ENST00000621242 ZSWIM5Q9P217 1185 aa18.08■□□□□ 0.48
SNHG28-203ENST00000621242 PCDHA1Q9Y5I3 950 aa18.08■□□□□ 0.48
SNHG28-203ENST00000621242 C5orf67F2Z3F1 127 aa18.07■□□□□ 0.48
SNHG28-203ENST00000621242 RB1P06400 928 aa18.07■□□□□ 0.48
SNHG28-203ENST00000621242 LINC00271P0C7V0 271 aa18.07■□□□□ 0.48
SNHG28-203ENST00000621242 CCND2P30279 289 aa18.07■□□□□ 0.48
SNHG28-203ENST00000621242 RNF135Q8IUD6 432 aa18.07■□□□□ 0.48
SNHG28-203ENST00000621242 RILPL2Q969X0 211 aa18.07■□□□□ 0.48
SNHG28-203ENST00000621242 TTC3P53804 2025 aa18.06■□□□□ 0.48
SNHG28-203ENST00000621242 NOP56O00567 594 aaKnown RBP18.06■□□□□ 0.48
SNHG28-203ENST00000621242 GTF2F1P35269 517 aaKnown RBP eCLIP18.06■□□□□ 0.48
SNHG28-203ENST00000621242 BMPR1AP36894 532 aa18.06■□□□□ 0.48
SNHG28-203ENST00000621242 NT5C2P49902 561 aa18.06■□□□□ 0.48
SNHG28-203ENST00000621242 MFAP1P55081 439 aaKnown RBP18.06■□□□□ 0.48
SNHG28-203ENST00000621242 IRX6P78412 446 aaPredicted RBP18.06■□□□□ 0.48
SNHG28-203ENST00000621242 HERC4Q5GLZ8 1057 aaPredicted RBP18.06■□□□□ 0.48
SNHG28-203ENST00000621242 FCHSD1Q86WN1 690 aa18.06■□□□□ 0.48
SNHG28-203ENST00000621242 MTMR8Q96EF0 704 aa18.06■□□□□ 0.48
SNHG28-203ENST00000621242 PHOX2BQ99453 314 aa18.06■□□□□ 0.48
SNHG28-203ENST00000621242 POP1Q99575 1024 aaKnown RBP18.06■□□□□ 0.48
SNHG28-203ENST00000621242 C11orf84Q9BUA3 381 aaPredicted RBP18.06■□□□□ 0.48
SNHG28-203ENST00000621242 USP26Q9BXU7 913 aa18.06■□□□□ 0.48
SNHG28-203ENST00000621242 LMAN2LQ9H0V9 348 aa18.06■□□□□ 0.48
SNHG28-203ENST00000621242 IGFLR1Q9H665 355 aa18.06■□□□□ 0.48
SNHG28-203ENST00000621242 ZDBF2Q9HCK1 2354 aa18.06■□□□□ 0.48
SNHG28-203ENST00000621242 KLRF2D3W0D1 207 aa18.05■□□□□ 0.48
SNHG28-203ENST00000621242 ZBTB5O15062 677 aa18.05■□□□□ 0.48
SNHG28-203ENST00000621242 CSPG5O95196 566 aa18.05■□□□□ 0.48
SNHG28-203ENST00000621242 GNAT1P11488 350 aa18.05■□□□□ 0.48
SNHG28-203ENST00000621242 FAM26DQ5JW98 314 aa18.05■□□□□ 0.48
SNHG28-203ENST00000621242 SAMD3Q8N6K7 520 aa18.05■□□□□ 0.48
SNHG28-203ENST00000621242 KIAA1671Q9BY89 1806 aa18.05■□□□□ 0.48
SNHG28-203ENST00000621242 ADGRA3Q8IWK6 1321 aa18.04■□□□□ 0.48
SNHG28-203ENST00000621242 GCOM1H8Y6P7 765 aaPredicted RBP18.04■□□□□ 0.48
SNHG28-203ENST00000621242 LINC01565O15544 149 aa18.04■□□□□ 0.48
SNHG28-203ENST00000621242 TBX10O75333 385 aa18.04■□□□□ 0.48
SNHG28-203ENST00000621242 POLR2MP0CAP2 368 aa18.04■□□□□ 0.48
SNHG28-203ENST00000621242 SDSP20132 328 aa18.04■□□□□ 0.48
SNHG28-203ENST00000621242 ADAM17P78536 824 aa18.04■□□□□ 0.48
SNHG28-203ENST00000621242 SMAD4Q13485 552 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms