RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 YBX2Q9Y2T7 364 aaKnown RBP23.54■■□□□ 1.36
SMC6-210ENST00000621152 TELO2Q9Y4R8 837 aa23.54■■□□□ 1.36
SMC6-210ENST00000621152 CNTNAP5Q8WYK1 1306 aa23.54■■□□□ 1.36
SMC6-210ENST00000621152 ATP9AO75110 1047 aa23.53■■□□□ 1.36
SMC6-210ENST00000621152 REC8O95072 547 aa23.53■■□□□ 1.36
SMC6-210ENST00000621152 CDC27P30260 824 aa23.53■■□□□ 1.36
SMC6-210ENST00000621152 NAPAP54920 295 aa23.53■■□□□ 1.36
SMC6-210ENST00000621152 SP4Q02446 784 aa23.53■■□□□ 1.36
SMC6-210ENST00000621152 APOBRQ0VD83 1088 aa23.53■■□□□ 1.36
SMC6-210ENST00000621152 GPNMBQ14956 572 aa23.53■■□□□ 1.36
SMC6-210ENST00000621152 UTP14CQ5TAP6 766 aaKnown RBP23.53■■□□□ 1.36
SMC6-210ENST00000621152 BLOC1S2Q6QNY1 142 aa23.53■■□□□ 1.36
SMC6-210ENST00000621152 GIMAP8Q8ND71 665 aaPredicted RBP23.53■■□□□ 1.36
SMC6-210ENST00000621152 GPRASP2Q96D09 838 aa23.53■■□□□ 1.36
SMC6-210ENST00000621152 MYOGP15173 224 aa23.52■■□□□ 1.36
SMC6-210ENST00000621152 ITGB5P18084 799 aa23.52■■□□□ 1.36
SMC6-210ENST00000621152 ADD1P35611 737 aaKnown RBP23.52■■□□□ 1.36
SMC6-210ENST00000621152 TYW1BQ6NUM6 668 aa23.52■■□□□ 1.36
SMC6-210ENST00000621152 CDHR1Q96JP9 859 aa23.52■■□□□ 1.36
SMC6-210ENST00000621152 RNPEPQ9H4A4 650 aa23.52■■□□□ 1.36
SMC6-210ENST00000621152 RIC8AQ9NPQ8 531 aa23.52■■□□□ 1.36
SMC6-210ENST00000621152 PCDHA11Q9Y5I1 949 aa23.52■■□□□ 1.36
SMC6-210ENST00000621152 UBIAD1Q9Y5Z9 338 aa23.52■■□□□ 1.36
SMC6-210ENST00000621152 C17orf102A2RUQ5 167 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 SMCO2A6NFE2 343 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 PARNO95453 639 aaKnown RBP23.51■■□□□ 1.35
SMC6-210ENST00000621152 SMIM10L2AP0DMW4 78 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 SMIM10L2BP0DMW5 78 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 RBL2Q08999 1139 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 TRIM71Q2Q1W2 868 aaKnown RBP23.51■■□□□ 1.35
SMC6-210ENST00000621152 ZNF618Q5T7W0 954 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 BRF1Q92994 677 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 ATP6V0A1Q93050 837 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 WNT8BQ93098 351 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 PRDM12Q9H4Q4 367 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 EHMT1Q9H9B1 1298 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 JADE2Q9NQC1 790 aa23.51■■□□□ 1.35
SMC6-210ENST00000621152 COL6A3P12111 3177 aa23.5■■□□□ 1.35
SMC6-210ENST00000621152 CCDC196A0A1B0GTZ2 297 aa23.5■■□□□ 1.35
SMC6-210ENST00000621152 DLL1O00548 723 aa23.5■■□□□ 1.35
SMC6-210ENST00000621152 METAP2P50579 478 aaKnown RBP eCLIP23.5■■□□□ 1.35
SMC6-210ENST00000621152 RCAN1P53805 252 aa23.5■■□□□ 1.35
SMC6-210ENST00000621152 PHOSPHO2Q8TCD6 241 aa23.5■■□□□ 1.35
SMC6-210ENST00000621152 PKD2L1Q9P0L9 805 aa23.5■■□□□ 1.35
SMC6-210ENST00000621152 SCN5AQ14524 2016 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 STXBP3O00186 592 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 MAFGO15525 162 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 NBNO60934 754 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 KCNA2P16389 499 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 RPS6KB1P23443 525 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 PSMA5P28066 241 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 THPOP40225 353 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 ADCY7P51828 1080 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 MTMR1Q13613 665 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 SERINC5Q86VE9 423 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.49■■□□□ 1.35
SMC6-210ENST00000621152 SLC9A7Q96T83 725 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 GAS2L1Q99501 681 aaPredicted RBP23.49■■□□□ 1.35
SMC6-210ENST00000621152 SETD4Q9NVD3 440 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 BARHL2Q9NY43 387 aa23.49■■□□□ 1.35
SMC6-210ENST00000621152 TREHO43280 583 aa23.48■■□□□ 1.35
SMC6-210ENST00000621152 BAIAP3O94812 1187 aa23.48■■□□□ 1.35
SMC6-210ENST00000621152 FOSP01100 380 aaPredicted RBP23.48■■□□□ 1.35
SMC6-210ENST00000621152 PPP1R18Q6NYC8 613 aa23.48■■□□□ 1.35
SMC6-210ENST00000621152 TRIM50Q86XT4 487 aa23.48■■□□□ 1.35
SMC6-210ENST00000621152 SEPT1Q8WYJ6 367 aa23.48■■□□□ 1.35
SMC6-210ENST00000621152 PGBD1Q96JS3 809 aa23.48■■□□□ 1.35
SMC6-210ENST00000621152 ZNF215Q9UL58 517 aaPredicted RBP23.48■■□□□ 1.35
SMC6-210ENST00000621152 TRIP12Q14669 1992 aaPredicted RBP23.47■■□□□ 1.35
SMC6-210ENST00000621152 GSTTP1A0A1W2PQM5 241 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 hCG_1984214I3L0E3 225 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 CXCL10P02778 98 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 GNAT1P11488 350 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 TCF7P36402 384 aaPredicted RBP23.47■■□□□ 1.35
SMC6-210ENST00000621152 KCNJ6P48051 423 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 PPP2R2DQ66LE6 453 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 CNKSR3Q6P9H4 555 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 TRAF7Q6Q0C0 670 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 TEX2Q8IWB9 1127 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 ZNF713Q8N859 430 aaPredicted RBP23.47■■□□□ 1.35
SMC6-210ENST00000621152 MXRA8Q9BRK3 442 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 GLT8D2Q9H1C3 349 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 TMEM260Q9NX78 707 aa23.47■■□□□ 1.35
SMC6-210ENST00000621152 RSPH10B2B2RC85 870 aa23.46■■□□□ 1.35
SMC6-210ENST00000621152 KIF28PB7ZC32 967 aa23.46■■□□□ 1.35
SMC6-210ENST00000621152 RSPH10BP0C881 870 aa23.46■■□□□ 1.35
SMC6-210ENST00000621152 HOXC8P31273 242 aa23.46■■□□□ 1.35
SMC6-210ENST00000621152 PFKFB3Q16875 520 aaPredicted RBP23.46■■□□□ 1.35
SMC6-210ENST00000621152 HERC6Q8IVU3 1022 aa23.46■■□□□ 1.35
SMC6-210ENST00000621152 FBXL16Q8N461 479 aa23.46■■□□□ 1.35
SMC6-210ENST00000621152 CYP2W1Q8TAV3 490 aa23.46■■□□□ 1.35
SMC6-210ENST00000621152 RBAK-RBAKDNI3L0D1 243 aa23.45■■□□□ 1.34
SMC6-210ENST00000621152 IGFBP4P22692 258 aa23.45■■□□□ 1.34
SMC6-210ENST00000621152 MBTPS1Q14703 1052 aa23.45■■□□□ 1.34
SMC6-210ENST00000621152 ANO3Q9BYT9 981 aa23.45■■□□□ 1.34
SMC6-210ENST00000621152 KCNH7Q9NS40 1196 aa23.45■■□□□ 1.34
SMC6-210ENST00000621152 ABHD14A-ACY1A0A1B0GW23 586 aa23.44■■□□□ 1.34
SMC6-210ENST00000621152 PRPF3O43395 683 aaKnown RBP23.44■■□□□ 1.34
SMC6-210ENST00000621152 CA3P07451 260 aa23.44■■□□□ 1.34
SMC6-210ENST00000621152 ARP10275 920 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms