RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 PRO3102Q9H379 93 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 SH3GLB2Q9NR46 395 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 RTEL1Q9NZ71 1219 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 PCDHA4Q9UN74 947 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 GNEQ9Y223 722 aaKnown RBP5.98□□□□□ -1.45
SHMT1-211ENST00000618902 PRUNE2Q8WUY3 3088 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 SYNRGQ9UMZ2 1314 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 NCOR1O75376 2440 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 TMEM265A0A087WTH1 108 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 A0A0U1RQG5 324 aaPredicted RBP5.97□□□□□ -1.45
SHMT1-211ENST00000618902 BTBD18B2RXH4 712 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 FAM86B1E9PN63 330 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 H0YGN5 161 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 RBAK-RBAKDNI3L0D1 243 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 KIAA0355O15063 1070 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 SORBS3O60504 671 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 ATP9AO75110 1047 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 PPFIA4O75335 1185 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 PGK1P00558 417 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 PFKMP08237 780 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 FAM86B2P0C5J1 330 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 C6orf222P0C671 652 aaPredicted RBP5.97□□□□□ -1.45
SHMT1-211ENST00000618902 ARP10275 920 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 GJB2P29033 226 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 CCND2P30279 289 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 SREBF1P36956 1147 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 CDK7P50613 346 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 NLRP5P59047 1200 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 ARHGAP4P98171 946 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 ARHGAP1Q07960 439 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 LAMC2Q13753 1193 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 KCNA10Q16322 511 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 FSCN1Q16658 493 aaKnown RBP5.97□□□□□ -1.45
SHMT1-211ENST00000618902 LY6KQ17RY6 165 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 CSPP1Q1MSJ5 1256 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 PCNX4Q63HM2 1172 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 NFRKBQ6P4R8 1299 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 TLK2Q86UE8 772 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 SESTD1Q86VW0 696 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 BLIDQ8IZY5 108 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 REXO1Q8N1G1 1221 aaKnown RBP5.97□□□□□ -1.45
SHMT1-211ENST00000618902 FBXO18Q8NFZ0 1043 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 BICD2Q8TD16 824 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 LENG9Q96B70 501 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 INPP4AQ96PE3 977 aaPredicted RBP5.97□□□□□ -1.45
SHMT1-211ENST00000618902 PPP1R9BQ96SB3 815 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 GDF15Q99988 308 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 WDR11Q9BZH6 1224 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 C6orf50Q9HD87 102 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 STARD7Q9NQZ5 370 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 DDX41Q9UJV9 622 aaKnown RBP5.97□□□□□ -1.45
SHMT1-211ENST00000618902 ATP6V1DQ9Y5K8 247 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 UBIAD1Q9Y5Z9 338 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 MUC3AQ02505 3323 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 FRMPD3Q5JV73 1810 aa5.97□□□□□ -1.45
SHMT1-211ENST00000618902 CHD9Q3L8U1 2897 aa5.96□□□□□ -1.45
SHMT1-211ENST00000618902 DOCK5Q9H7D0 1870 aa5.96□□□□□ -1.45
SHMT1-211ENST00000618902 CHD7Q9P2D1 2997 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 IGLV3-22A0A075B6J6 115 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 A0A1W2PQ45 241 aaPredicted RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 A0A1W2PQY0 241 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 SPATA31C2B4DYI2 1134 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 ARVCFO00192 962 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 MEIS1O00470 390 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 DYNC1LI2O43237 492 aaPredicted RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 BAG4O95429 457 aaKnown RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 MMP1P03956 469 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 ASGR1P07306 291 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 CYP3A4P08684 503 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 CLTBP09497 229 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 HOXD8P13378 290 aaPredicted RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 UBA1P22314 1058 aaKnown RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 GNA11P29992 359 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 ICAM3P32942 547 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 RFC2P35250 354 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 HMGN5P82970 282 aaKnown RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 BEX3Q00994 111 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 ITGB3BPQ13352 177 aaPredicted RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 AP3B2Q13367 1082 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 NEDD9Q14511 834 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 DGKDQ16760 1214 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 INF2Q27J81 1249 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 HABP4Q5JVS0 413 aaKnown RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 FAM109BQ6ICB4 259 aaPredicted RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 GALNT17Q6IS24 598 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 DIS3L2Q8IYB7 885 aaKnown RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 TDHQ8IZJ6 230 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 ZNF710Q8N1W2 664 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 CCDC155Q8N6L0 562 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 FAM184AQ8NB25 1140 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 CCDC148Q8NFR7 591 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 PPTC7Q8NI37 304 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 TBCKQ8TEA7 893 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 PPP1R13LQ8WUF5 828 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 BBXQ8WY36 941 aaPredicted RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 GJA10Q969M2 543 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 MBOAT7Q96N66 472 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 MXRA8Q9BRK3 442 aa5.96□□□□□ -1.46
SHMT1-211ENST00000618902 MTIF3Q9H2K0 278 aaKnown RBP5.96□□□□□ -1.46
SHMT1-211ENST00000618902 JADE2Q9NQC1 790 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms