RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 PP2D1A8MPX8 630 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 DNM1LO00429 736 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 MEIS1O00470 390 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 MSH4O15457 936 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 CUTAO60888 179 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 BMP15O95972 392 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 CCND2P30279 289 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 PRPHP41219 470 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 ME1P48163 572 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 FXR1P51114 621 aaKnown RBP eCLIP9.09□□□□□ -0.95
PCDH9-205ENST00000614931 CALCRLQ16602 461 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 CEP55Q53EZ4 464 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 SPECC1Q5M775 1068 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 MAMDC4Q6UXC1 1216 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 ZNF467Q7Z7K2 595 aaPredicted RBP9.09□□□□□ -0.95
PCDH9-205ENST00000614931 VSIG10LQ86VR7 867 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 PLA2G4DQ86XP0 818 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 C7orf61Q8IZ16 206 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 MSL3Q8N5Y2 521 aaKnown RBP9.09□□□□□ -0.95
PCDH9-205ENST00000614931 KRI1Q8N9T8 703 aaKnown RBP9.09□□□□□ -0.95
PCDH9-205ENST00000614931 ARRDC4Q8NCT1 418 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 MORC4Q8TE76 937 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 WDR11Q9BZH6 1224 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 CSRNP2Q9H175 543 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 JADE2Q9NQC1 790 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 CEP131Q9UPN4 1083 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 SRPRBQ9Y5M8 271 aaKnown RBP9.09□□□□□ -0.95
PCDH9-205ENST00000614931 ARID2Q68CP9 1835 aa9.09□□□□□ -0.95
PCDH9-205ENST00000614931 A0A087X0B3 334 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 GOLGA6L22H0YM25 854 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 ZNF865P0CJ78 1059 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-205ENST00000614931 ZNF76P36508 570 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 TXKP42681 527 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 UBE2HP62256 183 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 SPIRE1Q08AE8 756 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 ITGB3BPQ13352 177 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-205ENST00000614931 CSPP1Q1MSJ5 1256 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 LRRC26Q2I0M4 334 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 RESP18Q5W5W9 173 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 ARL6IP4Q66PJ3 421 aaKnown RBP9.08□□□□□ -0.96
PCDH9-205ENST00000614931 ADALQ6DHV7 355 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 NIPA1Q7RTP0 329 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 FSIP1Q8NA03 581 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 SLC5A5Q92911 643 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 INPP4AQ96PE3 977 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-205ENST00000614931 NAP1L4Q99733 375 aaKnown RBP9.08□□□□□ -0.96
PCDH9-205ENST00000614931 SENP6Q9GZR1 1112 aaPredicted RBP9.08□□□□□ -0.96
PCDH9-205ENST00000614931 KATNBL1Q9H079 304 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 BCAS3Q9H6U6 928 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 PKD2L1Q9P0L9 805 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 VAV3Q9UKW4 847 aa9.08□□□□□ -0.96
PCDH9-205ENST00000614931 SYNGAP1Q96PV0 1343 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 LOXHD1Q8IVV2 1947 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 FAM237AA0A1B0GTK4 181 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 A0A1B0GVL5 298 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 A0A1W2PPC1 479 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 A0A1W2PQ27 194 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 A0A1W2PQ64 194 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 A0A1W2PQD8 194 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 POTEMA6NI47 508 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 EML1O00423 815 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 LAD1O00515 517 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 TBX3O15119 743 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 DHX15O43143 795 aaKnown RBP9.07□□□□□ -0.96
PCDH9-205ENST00000614931 ATP9AO75110 1047 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 PSMD10O75832 226 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 SNAI1O95863 264 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-205ENST00000614931 PFKFB1P16118 471 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 PTGS1P23219 599 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 CDC25AP30304 524 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 BMP8BP34820 402 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 FXR2P51116 673 aaKnown RBP eCLIP9.07□□□□□ -0.96
PCDH9-205ENST00000614931 SETQ01105 290 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-205ENST00000614931 LRRC41Q15345 812 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 GJC2Q5T442 439 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-205ENST00000614931 XRRA1Q6P2D8 792 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 ARMCX2Q7L311 632 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 FBXO16Q8IX29 292 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-205ENST00000614931 IGSF22Q8N9C0 903 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 ENGASEQ8NFI3 743 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 LRRC15Q8TF66 581 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 FERMT2Q96AC1 680 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 EPSTI1Q96J88 318 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 IWS1Q96ST2 819 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 GDF15Q99988 308 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 MMTAG2Q9BU76 263 aaKnown RBP9.07□□□□□ -0.96
PCDH9-205ENST00000614931 AGO4Q9HCK5 861 aaKnown RBP9.07□□□□□ -0.96
PCDH9-205ENST00000614931 KCNH7Q9NS40 1196 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 ADD3Q9UEY8 706 aaKnown RBP9.07□□□□□ -0.96
PCDH9-205ENST00000614931 ZMYND8Q9ULU4 1186 aaPredicted RBP9.07□□□□□ -0.96
PCDH9-205ENST00000614931 HPSEQ9Y251 543 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 TELO2Q9Y4R8 837 aa9.07□□□□□ -0.96
PCDH9-205ENST00000614931 KBTBD13C9JR72 458 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 NR1I2O75469 434 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 ARIH2O95376 493 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 RARBP10826 455 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 AKR1A1P14550 325 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 KCNA2P16389 499 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 SYN1P17600 705 aa9.06□□□□□ -0.96
PCDH9-205ENST00000614931 CMA1P23946 247 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms