RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 GFPT2O94808 682 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 STAT1P42224 750 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 DOK7Q18PE1 504 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 DDX47Q9H0S4 455 aaKnown RBP13.75□□□□□ -0.21
MSH6-213ENST00000614496 IL17RBQ9NRM6 502 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 CTTNBP2NLQ9P2B4 639 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 AMFRQ9UKV5 643 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 DDX39AO00148 427 aaKnown RBP13.75□□□□□ -0.21
MSH6-213ENST00000614496 GJC1P36383 396 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 STAT3P40763 770 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 NAALADL2Q58DX5 795 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 TAOK3Q9H2K8 898 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 ZSCAN5CA6NGD5 496 aaPredicted RBP13.75□□□□□ -0.21
MSH6-213ENST00000614496 PRPHP41219 470 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 APBA1Q02410 837 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 ALKBH5Q6P6C2 394 aaKnown RBP13.75□□□□□ -0.21
MSH6-213ENST00000614496 ATP8A1Q9Y2Q0 1164 aa13.75□□□□□ -0.21
MSH6-213ENST00000614496 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
MSH6-213ENST00000614496 KDM3AQ9Y4C1 1321 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 PVALEFA0A1B0GWK0 134 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 A6NNZ2 444 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 ACTN1P12814 892 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 RASA1P20936 1047 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 TUBB8Q3ZCM7 444 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 SBK1Q52WX2 424 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 FBXW10Q5XX13 1052 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 ICE2Q659A1 982 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 ZIM3Q96PE6 472 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 PAIP2Q9BPZ3 127 aaKnown RBP13.74□□□□□ -0.21
MSH6-213ENST00000614496 PLAGL2Q9UPG8 496 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 FAM196BA6NMK8 535 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 CCDC172P0C7W6 258 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 KCNH2Q12809 1159 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 SF3B3Q15393 1217 aaKnown RBP13.74□□□□□ -0.21
MSH6-213ENST00000614496 ZYXQ15942 572 aaKnown RBP13.74□□□□□ -0.21
MSH6-213ENST00000614496 TTBK2Q6IQ55 1244 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 STXBP4Q6ZWJ1 553 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 SHISA4Q96DD7 197 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 RASAL2Q9UJF2 1139 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 NOVA2Q9UNW9 492 aaKnown RBP13.74□□□□□ -0.21
MSH6-213ENST00000614496 FRMD4BQ9Y2L6 1034 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 CFBP00751 764 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 KLRC1P26715 233 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 ERGIC2Q96RQ1 377 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 KCNK9Q9NPC2 374 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 CEP72Q9P209 647 aa13.74□□□□□ -0.21
MSH6-213ENST00000614496 CYTH3O43739 400 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 NEFHP12036 1026 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 AMPD2Q01433 879 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 TBC1D10BQ4KMP7 808 aaPredicted RBP13.73□□□□□ -0.21
MSH6-213ENST00000614496 RCSD1Q6JBY9 416 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 DDX42Q86XP3 938 aaKnown RBP eCLIP13.73□□□□□ -0.21
MSH6-213ENST00000614496 OR2W6PQ8NHA6 318 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 LEMD3Q9Y2U8 911 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 COL5A2P05997 1499 aaPredicted RBP13.73□□□□□ -0.21
MSH6-213ENST00000614496 EXOC3O60645 756 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 UBXN2AP68543 259 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 DHX9Q08211 1270 aaKnown RBP13.73□□□□□ -0.21
MSH6-213ENST00000614496 KIAA0895Q8NCT3 520 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 MGARPQ8TDB4 240 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 ATRNO75882 1429 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 POTEFA5A3E0 1075 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 USP17L10C9JJH3 530 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 EPHB6O15197 1021 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 SLC37A4O43826 429 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 LRRN2O75325 713 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 SEC24CP53992 1094 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 ASPRV1Q53RT3 343 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 POTEEQ6S8J3 1075 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 MARCH10Q8NA82 808 aaPredicted RBP13.73□□□□□ -0.21
MSH6-213ENST00000614496 EFCC1Q9HA90 598 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 ATP6V0A2Q9Y487 856 aa13.73□□□□□ -0.21
MSH6-213ENST00000614496 PGRMC1O00264 195 aaKnown RBP13.72□□□□□ -0.21
MSH6-213ENST00000614496 SPOPO43791 374 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 SYF2O95926 243 aaKnown RBP13.72□□□□□ -0.21
MSH6-213ENST00000614496 AFPP02771 609 aaKnown RBP13.72□□□□□ -0.21
MSH6-213ENST00000614496 NFIXQ14938 502 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 TNFRSF25Q93038 417 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 ZMYND12Q9H0C1 365 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 CAMTA1Q9Y6Y1 1673 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 PSMD2Q13200 908 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 CCDC91Q7Z6B0 441 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 RBM17Q96I25 401 aaKnown RBP13.72□□□□□ -0.21
MSH6-213ENST00000614496 KLRC4O43908 158 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 NF2P35240 595 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 IFNAR2P48551 515 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 CACNB3P54284 484 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 GRB10Q13322 594 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 PPP1R7Q15435 360 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 PNMA8AQ86V59 439 aaPredicted RBP13.72□□□□□ -0.21
MSH6-213ENST00000614496 GLIS3Q8NEA6 775 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 ZNF507Q8TCN5 953 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 MTMR8Q96EF0 704 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 PLCD4Q9BRC7 762 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 GCNT4Q9P109 453 aa13.72□□□□□ -0.21
MSH6-213ENST00000614496 TTLL1O95922 423 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms