RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 FCHSD1Q86WN1 690 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 C4orf32Q8N8J7 132 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 KRI1Q8N9T8 703 aaKnown RBP12.95□□□□□ -0.34
SLIRP-212ENST00000613856 MROH8Q9H579 483 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 A1CFQ9NQ94 594 aaKnown RBP12.95□□□□□ -0.34
SLIRP-212ENST00000613856 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 COL20A1Q9P218 1284 aa12.95□□□□□ -0.34
SLIRP-212ENST00000613856 FBXO2Q9UK22 296 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-212ENST00000613856 SRPRBQ9Y5M8 271 aaKnown RBP12.95□□□□□ -0.34
SLIRP-212ENST00000613856 GOLGA6L4A6NEF3 574 aa12.94□□□□□ -0.34
SLIRP-212ENST00000613856 TDP2O95551 362 aa12.94□□□□□ -0.34
SLIRP-212ENST00000613856 OR52Z1P0C646 297 aa12.94□□□□□ -0.34
SLIRP-212ENST00000613856 MARCKSP29966 332 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-212ENST00000613856 CCNA1P78396 465 aa12.94□□□□□ -0.34
SLIRP-212ENST00000613856 GRB14Q14449 540 aa12.94□□□□□ -0.34
SLIRP-212ENST00000613856 NSMFQ6X4W1 530 aa12.94□□□□□ -0.34
SLIRP-212ENST00000613856 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
SLIRP-212ENST00000613856 GPT2Q8TD30 523 aa12.94□□□□□ -0.34
SLIRP-212ENST00000613856 PRKAG2Q9UGJ0 569 aa12.94□□□□□ -0.34
SLIRP-212ENST00000613856 FAM237AA0A1B0GTK4 181 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 SLC15A5A6NIM6 579 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 SLC37A4O43826 429 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 TRAK2O60296 914 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 ERCC3P19447 782 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 ADCYAP1R1P41586 468 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 SMAD3P84022 425 aaKnown RBP12.93□□□□□ -0.34
SLIRP-212ENST00000613856 BAATQ14032 418 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-212ENST00000613856 SNX17Q15036 470 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 Q4G0T1 1027 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 PCNX4Q63HM2 1172 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 XRRA1Q6P2D8 792 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 NCAPG2Q86XI2 1143 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 TMEM60Q9H2L4 133 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 PXMP2Q9NR77 195 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 DDX25Q9UHL0 483 aaKnown RBP12.93□□□□□ -0.34
SLIRP-212ENST00000613856 DDX49Q9Y6V7 483 aaKnown RBP12.93□□□□□ -0.34
SLIRP-212ENST00000613856 KIAA1217Q5T5P2 1943 aa12.93□□□□□ -0.34
SLIRP-212ENST00000613856 TBX3O15119 743 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 HOXC6P09630 235 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 CMA1P23946 247 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 SETQ01105 290 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-212ENST00000613856 CALCRLQ16602 461 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 NIPA1Q7RTP0 329 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 DNERQ8NFT8 737 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 GBF1Q92538 1859 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 MRPS27Q92552 414 aaKnown RBP12.92□□□□□ -0.34
SLIRP-212ENST00000613856 LENG9Q96B70 501 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 MTMR9Q96QG7 549 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 TAAR1Q96RJ0 339 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 RMDN3Q96TC7 470 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 PDCD2LQ9BRP1 358 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 KCNMB3Q9NPA1 279 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 MRVI1Q9Y6F6 885 aa12.92□□□□□ -0.34
SLIRP-212ENST00000613856 MYO9BQ13459 2157 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 TCF20Q9UGU0 1960 aaKnown RBP12.91□□□□□ -0.34
SLIRP-212ENST00000613856 IGLV3-22A0A075B6J6 115 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 LOC102724159A0A0B4J2E5 919 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 COBLO75128 1261 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 LONP1P36776 959 aaKnown RBP12.91□□□□□ -0.34
SLIRP-212ENST00000613856 TLE2Q04725 743 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 PGM5Q15124 567 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 PWP2Q15269 919 aaKnown RBP12.91□□□□□ -0.34
SLIRP-212ENST00000613856 RESP18Q5W5W9 173 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 SHC4Q6S5L8 630 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 DTHD1Q6ZMT9 781 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 ABRAQ8N0Z2 381 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 ANKRD35Q8N283 1001 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 FAM133AQ8N9E0 248 aa12.91□□□□□ -0.34
SLIRP-212ENST00000613856 NSUN6Q8TEA1 469 aaKnown RBP12.91□□□□□ -0.34
SLIRP-212ENST00000613856 LENG1Q96BZ8 264 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-212ENST00000613856 RNPC3Q96LT9 517 aaKnown RBP12.91□□□□□ -0.34
SLIRP-212ENST00000613856 DNAJC25-GNG10A0A024R161 153 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 FAM86B1E9PN63 330 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 TNFRSF10AO00220 468 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 MSCO60682 206 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 STAM2O75886 525 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 FAM86B2P0C5J1 330 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 ADORA2AP29274 412 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
SLIRP-212ENST00000613856 GRIN1Q05586 938 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 FAM160A1Q05DH4 1040 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 KCTD2Q14681 263 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 LRRC41Q15345 812 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 CEP55Q53EZ4 464 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 ARHGEF16Q5VV41 709 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 CCDC73Q6ZRK6 1079 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 SLFN12Q8IYM2 578 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 FSIP1Q8NA03 581 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 IL31RAQ8NI17 732 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 ETNPPLQ8TBG4 499 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 PPM1EQ8WY54 764 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 AK8Q96MA6 479 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 CLIC6Q96NY7 704 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 IWS1Q96ST2 819 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 MMP19Q99542 508 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 GOLPH3LQ9H4A5 285 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 ADD3Q9UEY8 706 aaKnown RBP12.9□□□□□ -0.34
SLIRP-212ENST00000613856 HPSEQ9Y251 543 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 UBIAD1Q9Y5Z9 338 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms