RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ATP6V0A1Q93050 837 aa27.25■■□□□ 1.95
MMP28-203ENST00000612672 C17orf102A2RUQ5 167 aa27.24■■□□□ 1.95
MMP28-203ENST00000612672 TCEAL5Q5H9L2 206 aa27.24■■□□□ 1.95
MMP28-203ENST00000612672 RNPEPQ9H4A4 650 aa27.24■■□□□ 1.95
MMP28-203ENST00000612672 PCDHA1Q9Y5I3 950 aa27.24■■□□□ 1.95
MMP28-203ENST00000612672 PRR33A8MZF0 331 aa27.23■■□□□ 1.95
MMP28-203ENST00000612672 KLRF2D3W0D1 207 aa27.23■■□□□ 1.95
MMP28-203ENST00000612672 H3BRB1 525 aa27.23■■□□□ 1.95
MMP28-203ENST00000612672 ZBTB5O15062 677 aa27.23■■□□□ 1.95
MMP28-203ENST00000612672 UPP2O95045 317 aa27.23■■□□□ 1.95
MMP28-203ENST00000612672 SSTR3P32745 418 aaPredicted RBP27.23■■□□□ 1.95
MMP28-203ENST00000612672 SEMA3FQ13275 785 aa27.23■■□□□ 1.95
MMP28-203ENST00000612672 B4GALNT3Q6L9W6 998 aa27.23■■□□□ 1.95
MMP28-203ENST00000612672 TOP1MTQ969P6 601 aa27.23■■□□□ 1.95
MMP28-203ENST00000612672 TUT1Q9H6E5 874 aaKnown RBP27.23■■□□□ 1.95
MMP28-203ENST00000612672 ZNF318Q5VUA4 2279 aa27.23■■□□□ 1.95
MMP28-203ENST00000612672 PALM3A6NDB9 673 aaPredicted RBP27.22■■□□□ 1.95
MMP28-203ENST00000612672 H3BNC9 293 aa27.22■■□□□ 1.95
MMP28-203ENST00000612672 GPM6BQ13491 265 aa27.22■■□□□ 1.95
MMP28-203ENST00000612672 COL19A1Q14993 1142 aa27.22■■□□□ 1.95
MMP28-203ENST00000612672 IFIT1BQ5T764 474 aaKnown RBP27.22■■□□□ 1.95
MMP28-203ENST00000612672 TRIM50Q86XT4 487 aa27.22■■□□□ 1.95
MMP28-203ENST00000612672 DSCC1Q9BVC3 393 aa27.22■■□□□ 1.95
MMP28-203ENST00000612672 SENP2Q9HC62 589 aa27.22■■□□□ 1.95
MMP28-203ENST00000612672 SUPT16HQ9Y5B9 1047 aaKnown RBP27.22■■□□□ 1.95
MMP28-203ENST00000612672 KIAA1671Q9BY89 1806 aa27.21■■□□□ 1.95
MMP28-203ENST00000612672 LINC00271P0C7V0 271 aa27.21■■□□□ 1.95
MMP28-203ENST00000612672 NT5C2P49902 561 aa27.21■■□□□ 1.95
MMP28-203ENST00000612672 MRPS9P82933 396 aaKnown RBP27.21■■□□□ 1.95
MMP28-203ENST00000612672 KCNV1Q6PIU1 500 aa27.21■■□□□ 1.95
MMP28-203ENST00000612672 HOMER1Q86YM7 354 aa27.21■■□□□ 1.95
MMP28-203ENST00000612672 SMC5Q8IY18 1101 aa27.21■■□□□ 1.95
MMP28-203ENST00000612672 TMEM192Q8IY95 271 aa27.21■■□□□ 1.95
MMP28-203ENST00000612672 BANK1Q8NDB2 785 aa27.21■■□□□ 1.95
MMP28-203ENST00000612672 PIGSQ96S52 555 aa27.21■■□□□ 1.95
MMP28-203ENST00000612672 YME1L1Q96TA2 773 aa27.21■■□□□ 1.95
MMP28-203ENST00000612672 CYTH3O43739 400 aa27.2■■□□□ 1.94
MMP28-203ENST00000612672 CCND2P30279 289 aa27.2■■□□□ 1.94
MMP28-203ENST00000612672 TIGD5Q53EQ6 642 aa27.2■■□□□ 1.94
MMP28-203ENST00000612672 FCHSD1Q86WN1 690 aa27.2■■□□□ 1.94
MMP28-203ENST00000612672 UBAC1Q9BSL1 405 aa27.2■■□□□ 1.94
MMP28-203ENST00000612672 OSBPL3Q9H4L5 887 aa27.2■■□□□ 1.94
MMP28-203ENST00000612672 MLXIPQ9HAP2 919 aa27.2■■□□□ 1.94
MMP28-203ENST00000612672 SETD4Q9NVD3 440 aa27.2■■□□□ 1.94
MMP28-203ENST00000612672 FRMPD4Q14CM0 1322 aa27.19■■□□□ 1.94
MMP28-203ENST00000612672 ZP2Q05996 745 aa27.19■■□□□ 1.94
MMP28-203ENST00000612672 IMMTQ16891 758 aaKnown RBP27.19■■□□□ 1.94
MMP28-203ENST00000612672 ALYREFQ86V81 257 aaKnown RBP27.19■■□□□ 1.94
MMP28-203ENST00000612672 SEPT8Q92599 483 aa27.19■■□□□ 1.94
MMP28-203ENST00000612672 PABPC5Q96DU9 382 aaKnown RBP27.19■■□□□ 1.94
MMP28-203ENST00000612672 SAMD11Q96NU1 681 aa27.19■■□□□ 1.94
MMP28-203ENST00000612672 KRT23Q9C075 422 aa27.19■■□□□ 1.94
MMP28-203ENST00000612672 DIAPH3Q9NSV4 1193 aa27.19■■□□□ 1.94
MMP28-203ENST00000612672 MAP3K20Q9NYL2 800 aaKnown RBP27.19■■□□□ 1.94
MMP28-203ENST00000612672 KAT6AQ92794 2004 aa27.19■■□□□ 1.94
MMP28-203ENST00000612672 TGFB3P10600 412 aa27.18■■□□□ 1.94
MMP28-203ENST00000612672 LTBRP36941 435 aa27.18■■□□□ 1.94
MMP28-203ENST00000612672 ADAM17P78536 824 aa27.18■■□□□ 1.94
MMP28-203ENST00000612672 PTPROQ16827 1216 aa27.18■■□□□ 1.94
MMP28-203ENST00000612672 GCOM1H8Y6P7 765 aaPredicted RBP27.17■■□□□ 1.94
MMP28-203ENST00000612672 POLR2MP0CAP2 368 aa27.17■■□□□ 1.94
MMP28-203ENST00000612672 CYFIP1Q7L576 1253 aa27.17■■□□□ 1.94
MMP28-203ENST00000612672 GPR20Q99678 358 aa27.17■■□□□ 1.94
MMP28-203ENST00000612672 IFIH1Q9BYX4 1025 aaKnown RBP27.17■■□□□ 1.94
MMP28-203ENST00000612672 RIOX1Q9H6W3 641 aa27.17■■□□□ 1.94
MMP28-203ENST00000612672 CTNNA3Q9UI47 895 aa27.17■■□□□ 1.94
MMP28-203ENST00000612672 POTEB3A0JP26 581 aa27.16■■□□□ 1.94
MMP28-203ENST00000612672 GRM4Q14833 912 aa27.16■■□□□ 1.94
MMP28-203ENST00000612672 POTEBQ6S5H4 581 aa27.16■■□□□ 1.94
MMP28-203ENST00000612672 CHD1LQ86WJ1 897 aa27.16■■□□□ 1.94
MMP28-203ENST00000612672 INPP4AQ96PE3 977 aaPredicted RBP27.16■■□□□ 1.94
MMP28-203ENST00000612672 UIMC1Q96RL1 719 aa27.16■■□□□ 1.94
MMP28-203ENST00000612672 NSUN3Q9H649 340 aaKnown RBP27.16■■□□□ 1.94
MMP28-203ENST00000612672 RC3H2Q9HBD1 1191 aaKnown RBP27.16■■□□□ 1.94
MMP28-203ENST00000612672 TAF6LQ9Y6J9 622 aa27.16■■□□□ 1.94
MMP28-203ENST00000612672 USP34Q70CQ2 3546 aa27.16■■□□□ 1.94
MMP28-203ENST00000612672 C19orf67A6NJJ6 358 aa27.15■■□□□ 1.94
MMP28-203ENST00000612672 IGHDP01880 384 aa27.15■■□□□ 1.94
MMP28-203ENST00000612672 ICAM3P32942 547 aa27.15■■□□□ 1.94
MMP28-203ENST00000612672 DLX2Q07687 328 aaPredicted RBP27.15■■□□□ 1.94
MMP28-203ENST00000612672 EP400NLQ6ZTU2 488 aa27.15■■□□□ 1.94
MMP28-203ENST00000612672 RPAINQ86UA6 219 aa27.15■■□□□ 1.94
MMP28-203ENST00000612672 LMBR1Q8WVP7 490 aa27.15■■□□□ 1.94
MMP28-203ENST00000612672 CNNM2Q9H8M5 875 aa27.15■■□□□ 1.94
MMP28-203ENST00000612672 CLDND1Q9NY35 253 aa27.15■■□□□ 1.94
MMP28-203ENST00000612672 DCXO43602 365 aa27.14■■□□□ 1.94
MMP28-203ENST00000612672 CAND2O75155 1236 aa27.14■■□□□ 1.94
MMP28-203ENST00000612672 CHRNA1P02708 482 aa27.14■■□□□ 1.94
MMP28-203ENST00000612672 PUS10Q3MIT2 529 aaKnown RBP27.14■■□□□ 1.94
MMP28-203ENST00000612672 FAM26DQ5JW98 314 aa27.14■■□□□ 1.94
MMP28-203ENST00000612672 METTL7BQ6UX53 244 aa27.14■■□□□ 1.94
MMP28-203ENST00000612672 RUFY4Q6ZNE9 571 aa27.14■■□□□ 1.94
MMP28-203ENST00000612672 SAMD3Q8N6K7 520 aa27.14■■□□□ 1.94
MMP28-203ENST00000612672 RTEL1Q9NZ71 1219 aa27.14■■□□□ 1.94
MMP28-203ENST00000612672 TTC3P53804 2025 aa27.14■■□□□ 1.93
MMP28-203ENST00000612672 LOXHD1Q8IVV2 1947 aa27.14■■□□□ 1.93
MMP28-203ENST00000612672 SPATA31C2B4DYI2 1134 aa27.13■■□□□ 1.93
MMP28-203ENST00000612672 NOP56O00567 594 aaKnown RBP27.13■■□□□ 1.93
MMP28-203ENST00000612672 GRM6O15303 877 aa27.13■■□□□ 1.93
MMP28-203ENST00000612672 ALADP13716 330 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms