RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SLPIP03973 132 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 DBHP09172 617 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 GLI4P10075 376 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 TRIM61Q5EBN2 209 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 BICRALQ6AI39 1079 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 STYK1Q6J9G0 422 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 KCNT2Q6UVM3 1135 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 CCDC103Q8IW40 242 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 CLUHP3Q96NS8 147 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 MTA3Q9BTC8 594 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 PHF20Q9BVI0 1012 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 C1QTNF3Q9BXJ4 246 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 SLC52A2Q9HAB3 445 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 PLAAQ9Y263 795 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 TRAF6Q9Y4K3 522 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 NPFFR2Q9Y5X5 522 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 PMF1-BGLAPU3KQ54 211 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 ASXL2Q76L83 1435 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 AQP7O14520 342 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 C6P13671 934 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 ATF2P15336 505 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 DALRD3Q5D0E6 543 aaKnown RBP6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 CPZQ66K79 652 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 MBLAC2Q68D91 279 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 RSPO2Q6UXX9 243 aaPredicted RBP6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 DHX37Q8IY37 1157 aaKnown RBP6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 NIM1KQ8IY84 436 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 LZTR1Q8N653 840 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 SLC7A14Q8TBB6 771 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 NINJ1Q92982 152 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 ZFYVE21Q9BQ24 234 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 GPR27Q9NS67 375 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 GULP1Q9UBP9 304 aa6.17□□□□□ -1.42
SMCHD1-213ENST00000609587 KCNQ2O43526 872 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 APPP05067 770 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 LCP1P13796 627 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 TACR1P25103 407 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 HMGA2P52926 109 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 FOXO4P98177 505 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 TARBP2Q15633 366 aaKnown RBP6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 INF2Q27J81 1249 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 RNF187Q5TA31 235 aaPredicted RBP6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 BRAPQ7Z569 592 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 CABP7Q86V35 215 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 IFNL3Q8IZI9 196 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 NETO2Q8NC67 525 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 RCBTB1Q8NDN9 531 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 GSTCDQ8NEC7 633 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 DPF3Q92784 378 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 C8orf49Q96NF6 230 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 MENTQ9BUN1 341 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 FBLN5Q9UBX5 448 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 RWDD3Q9Y3V2 267 aa6.16□□□□□ -1.42
SMCHD1-213ENST00000609587 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 MYO1BO43795 1136 aa6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 MSCO60682 206 aa6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 NAT1P18440 290 aa6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 GPR85P60893 370 aa6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 GUCY1A3Q02108 690 aa6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 Q8N1X5 172 aa6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 TTC9BQ8N6N2 239 aa6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 MFSD3Q96ES6 412 aa6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 MAGEB10Q96LZ2 347 aaPredicted RBP6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 TRIM39Q9HCM9 518 aa6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 PRKAB1Q9Y478 270 aa6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 PCDHA2Q9Y5H9 948 aa6.15□□□□□ -1.42
SMCHD1-213ENST00000609587 F8W031 263 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 CRTAMO95727 393 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 NCLP19338 710 aaKnown RBP6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 SDSP20132 328 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 TACR2P21452 398 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 MC3RP41968 323 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 GJA9P57773 515 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 RPL11P62913 178 aaKnown RBP6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 TM4SF20Q53R12 229 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 LBX2Q6XYB7 198 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 FGD2Q7Z6J4 655 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 MTDHQ86UE4 582 aaKnown RBP6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 CARFQ8N187 725 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 PLEKHO2Q8TD55 490 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 SCLYQ96I15 445 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 CHAMP1Q96JM3 812 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 TMX1Q9H3N1 280 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 MAGEC2Q9UBF1 373 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 PCDHA9Q9Y5H5 950 aa6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 TIMM13Q9Y5L4 95 aaPredicted RBP6.14□□□□□ -1.43
SMCHD1-213ENST00000609587 DNAJC6O75061 913 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 DNAJC8O75937 253 aaPredicted RBP6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 RASGRP1O95267 797 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 FUCA1P04066 466 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 MASP1P48740 699 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 GTF2A2P52657 109 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 PRR5P85299 388 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 FILIP1Q7Z7B0 1213 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 Q8N1Y9 231 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 USP33Q8TEY7 942 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 TSPAN17Q96FV3 270 aa6.13□□□□□ -1.43
SMCHD1-213ENST00000609587 PEX11GQ96HA9 241 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms