RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 SAMD3Q8N6K7 520 aa20.15■□□□□ 0.82
CHMP4A-211ENST00000609024 IL17RAQ96F46 866 aa20.15■□□□□ 0.82
CHMP4A-211ENST00000609024 MFSD14AQ96MC6 490 aa20.15■□□□□ 0.82
CHMP4A-211ENST00000609024 RWDD3Q9Y3V2 267 aa20.15■□□□□ 0.82
CHMP4A-211ENST00000609024 B4E1Z4 1266 aa20.14■□□□□ 0.81
CHMP4A-211ENST00000609024 UBA1P22314 1058 aaKnown RBP20.14■□□□□ 0.81
CHMP4A-211ENST00000609024 NHLH1Q02575 133 aa20.14■□□□□ 0.81
CHMP4A-211ENST00000609024 ZP2Q05996 745 aa20.14■□□□□ 0.81
CHMP4A-211ENST00000609024 PGM5Q15124 567 aa20.14■□□□□ 0.81
CHMP4A-211ENST00000609024 GNPTABQ3T906 1256 aa20.14■□□□□ 0.81
CHMP4A-211ENST00000609024 ANKS1AQ92625 1134 aa20.14■□□□□ 0.81
CHMP4A-211ENST00000609024 C16orf70Q9BSU1 422 aa20.14■□□□□ 0.81
CHMP4A-211ENST00000609024 PCDHA1Q9Y5I3 950 aa20.14■□□□□ 0.81
CHMP4A-211ENST00000609024 TREHO43280 583 aa20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 HOXA13P31271 388 aaPredicted RBP20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 HIC1Q14526 733 aa20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 IMMTQ16891 758 aaKnown RBP20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 IFIT1BQ5T764 474 aaKnown RBP20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 STOX1Q6ZVD7 989 aa20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 RPAINQ86UA6 219 aa20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 VSIG10LQ86VR7 867 aa20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 ENAHQ8N8S7 591 aaPredicted RBP20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 FBXL18Q96ME1 805 aa20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 C11orf84Q9BUA3 381 aaPredicted RBP20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 USP26Q9BXU7 913 aa20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 KRT23Q9C075 422 aa20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 ZNF215Q9UL58 517 aaPredicted RBP20.13■□□□□ 0.81
CHMP4A-211ENST00000609024 POTEB3A0JP26 581 aa20.12■□□□□ 0.81
CHMP4A-211ENST00000609024 KLRF2D3W0D1 207 aa20.12■□□□□ 0.81
CHMP4A-211ENST00000609024 GCOM1H8Y6P7 765 aaPredicted RBP20.12■□□□□ 0.81
CHMP4A-211ENST00000609024 ZBTB5O15062 677 aa20.12■□□□□ 0.81
CHMP4A-211ENST00000609024 LGALS2P05162 132 aa20.12■□□□□ 0.81
CHMP4A-211ENST00000609024 RB1P06400 928 aa20.12■□□□□ 0.81
CHMP4A-211ENST00000609024 POLR2MP0CAP2 368 aa20.12■□□□□ 0.81
CHMP4A-211ENST00000609024 POTEBQ6S5H4 581 aa20.12■□□□□ 0.81
CHMP4A-211ENST00000609024 FCHSD1Q86WN1 690 aa20.12■□□□□ 0.81
CHMP4A-211ENST00000609024 LMAN2LQ9H0V9 348 aa20.12■□□□□ 0.81
CHMP4A-211ENST00000609024 RNPEPQ9H4A4 650 aa20.12■□□□□ 0.81
CHMP4A-211ENST00000609024 RGS20O76081 388 aa20.11■□□□□ 0.81
CHMP4A-211ENST00000609024 MKRN4PQ13434 485 aaPredicted RBP20.11■□□□□ 0.81
CHMP4A-211ENST00000609024 NEDD9Q14511 834 aa20.11■□□□□ 0.81
CHMP4A-211ENST00000609024 CLUL1Q15846 466 aa20.11■□□□□ 0.81
CHMP4A-211ENST00000609024 HOMER1Q86YM7 354 aa20.11■□□□□ 0.81
CHMP4A-211ENST00000609024 PPP2R3CQ969Q6 453 aa20.11■□□□□ 0.81
CHMP4A-211ENST00000609024 CNNM2Q9H8M5 875 aa20.11■□□□□ 0.81
CHMP4A-211ENST00000609024 DIAPH3Q9NSV4 1193 aa20.11■□□□□ 0.81
CHMP4A-211ENST00000609024 NLRC5Q86WI3 1866 aa20.1■□□□□ 0.81
CHMP4A-211ENST00000609024 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.1■□□□□ 0.81
CHMP4A-211ENST00000609024 SDSP20132 328 aa20.1■□□□□ 0.81
CHMP4A-211ENST00000609024 ARHGAP4P98171 946 aa20.1■□□□□ 0.81
CHMP4A-211ENST00000609024 SP2Q02086 613 aa20.1■□□□□ 0.81
CHMP4A-211ENST00000609024 ZFP91Q96JP5 570 aaPredicted RBP20.1■□□□□ 0.81
CHMP4A-211ENST00000609024 IGFLR1Q9H665 355 aa20.1■□□□□ 0.81
CHMP4A-211ENST00000609024 SETD4Q9NVD3 440 aa20.1■□□□□ 0.81
CHMP4A-211ENST00000609024 ZSWIM5Q9P217 1185 aa20.1■□□□□ 0.81
CHMP4A-211ENST00000609024 C19orf67A6NJJ6 358 aa20.09■□□□□ 0.81
CHMP4A-211ENST00000609024 CSPG5O95196 566 aa20.09■□□□□ 0.81
CHMP4A-211ENST00000609024 IRS1P35568 1242 aa20.09■□□□□ 0.81
CHMP4A-211ENST00000609024 BMPR1AP36894 532 aa20.09■□□□□ 0.81
CHMP4A-211ENST00000609024 GHRHRQ02643 423 aa20.09■□□□□ 0.81
CHMP4A-211ENST00000609024 CWC27Q6UX04 472 aaKnown RBP20.09■□□□□ 0.81
CHMP4A-211ENST00000609024 RALGAPA2Q2PPJ7 1873 aa20.09■□□□□ 0.81
CHMP4A-211ENST00000609024 OPLAHO14841 1288 aa20.08■□□□□ 0.81
CHMP4A-211ENST00000609024 STAM2O75886 525 aa20.08■□□□□ 0.81
CHMP4A-211ENST00000609024 BTG3Q14201 252 aaPredicted RBP20.08■□□□□ 0.81
CHMP4A-211ENST00000609024 COL19A1Q14993 1142 aa20.08■□□□□ 0.81
CHMP4A-211ENST00000609024 SMAD2Q15796 467 aaKnown RBP20.08■□□□□ 0.81
CHMP4A-211ENST00000609024 UTP14CQ5TAP6 766 aaKnown RBP20.08■□□□□ 0.81
CHMP4A-211ENST00000609024 HFE2Q6ZVN8 426 aa20.08■□□□□ 0.81
CHMP4A-211ENST00000609024 CYFIP1Q7L576 1253 aa20.08■□□□□ 0.81
CHMP4A-211ENST00000609024 RSPH3Q86UC2 560 aa20.08■□□□□ 0.81
CHMP4A-211ENST00000609024 STAG2Q8N3U4 1231 aa20.08■□□□□ 0.81
CHMP4A-211ENST00000609024 IL31RAQ8NI17 732 aa20.08■□□□□ 0.81
CHMP4A-211ENST00000609024 COL4A6Q14031 1691 aa20.07■□□□□ 0.8
CHMP4A-211ENST00000609024 C5orf67F2Z3F1 127 aa20.07■□□□□ 0.8
CHMP4A-211ENST00000609024 RBAK-RBAKDNI3L0D1 243 aa20.07■□□□□ 0.8
CHMP4A-211ENST00000609024 STXBP3O00186 592 aa20.07■□□□□ 0.8
CHMP4A-211ENST00000609024 HIP1O00291 1037 aa20.07■□□□□ 0.8
CHMP4A-211ENST00000609024 HOXC8P31273 242 aa20.07■□□□□ 0.8
CHMP4A-211ENST00000609024 METTL7BQ6UX53 244 aa20.07■□□□□ 0.8
CHMP4A-211ENST00000609024 GPKOWQ92917 476 aaPredicted RBP eCLIP20.07■□□□□ 0.8
CHMP4A-211ENST00000609024 LNPKQ9C0E8 428 aa20.07■□□□□ 0.8
CHMP4A-211ENST00000609024 MUTYHQ9UIF7 546 aa20.07■□□□□ 0.8
CHMP4A-211ENST00000609024 ADGRA3Q8IWK6 1321 aa20.06■□□□□ 0.8
CHMP4A-211ENST00000609024 MBTPS2O43462 519 aa20.06■□□□□ 0.8
CHMP4A-211ENST00000609024 NDUFV1P49821 464 aa20.06■□□□□ 0.8
CHMP4A-211ENST00000609024 SP4Q02446 784 aa20.06■□□□□ 0.8
CHMP4A-211ENST00000609024 SMAD4Q13485 552 aaKnown RBP20.06■□□□□ 0.8
CHMP4A-211ENST00000609024 CD207Q9UJ71 328 aa20.06■□□□□ 0.8
CHMP4A-211ENST00000609024 NRCAMQ92823 1304 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 LAMA4Q16363 1823 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 ERICH2A1L162 156 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 GRM6O15303 877 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 FIBPO43427 364 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 PPP1R11O60927 126 aaPredicted RBP20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 GHRP10912 638 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 LTBRP36941 435 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 HYAL1Q12794 435 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 TRDNQ13061 729 aa20.05■□□□□ 0.8
CHMP4A-211ENST00000609024 FAM26DQ5JW98 314 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms