RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 CATIPQ7Z7H3 387 aa23.37■■□□□ 1.33
PPFIA3-204ENST00000602492 DBF4BQ8NFT6 615 aa23.37■■□□□ 1.33
PPFIA3-204ENST00000602492 SUGCTQ9HAC7 445 aa23.37■■□□□ 1.33
PPFIA3-204ENST00000602492 E7EWF7 191 aa23.36■■□□□ 1.33
PPFIA3-204ENST00000602492 STAM2O75886 525 aa23.36■■□□□ 1.33
PPFIA3-204ENST00000602492 AMHP03971 560 aa23.36■■□□□ 1.33
PPFIA3-204ENST00000602492 SMIM10L2AP0DMW4 78 aa23.36■■□□□ 1.33
PPFIA3-204ENST00000602492 SMIM10L2BP0DMW5 78 aa23.36■■□□□ 1.33
PPFIA3-204ENST00000602492 CHMLP26374 656 aa23.36■■□□□ 1.33
PPFIA3-204ENST00000602492 NEDD9Q14511 834 aa23.36■■□□□ 1.33
PPFIA3-204ENST00000602492 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.36■■□□□ 1.33
PPFIA3-204ENST00000602492 INPP4AQ96PE3 977 aaPredicted RBP23.36■■□□□ 1.33
PPFIA3-204ENST00000602492 C1QTNF1Q9BXJ1 281 aa23.36■■□□□ 1.33
PPFIA3-204ENST00000602492 INSL6Q9Y581 213 aa23.36■■□□□ 1.33
PPFIA3-204ENST00000602492 FRMPD4Q14CM0 1322 aa23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 HOXC8P31273 242 aa23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 ICAM3P32942 547 aa23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 MRPS9P82933 396 aaKnown RBP23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 ERICH6BQ5W0A0 696 aa23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 METTL7BQ6UX53 244 aa23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 MYOCDQ8IZQ8 938 aa23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 PIBF1Q8WXW3 757 aa23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 USP26Q9BXU7 913 aa23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 BCAS3Q9H6U6 928 aa23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 RAPGEFL1Q9UHV5 662 aa23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 TAF6LQ9Y6J9 622 aa23.35■■□□□ 1.33
PPFIA3-204ENST00000602492 PLEKHG4Q58EX7 1191 aa23.34■■□□□ 1.33
PPFIA3-204ENST00000602492 RNPEPQ9H4A4 650 aa23.34■■□□□ 1.33
PPFIA3-204ENST00000602492 SPATA31C2B4DYI2 1134 aa23.33■■□□□ 1.33
PPFIA3-204ENST00000602492 RBAK-RBAKDNI3L0D1 243 aa23.33■■□□□ 1.33
PPFIA3-204ENST00000602492 TREHO43280 583 aa23.33■■□□□ 1.33
PPFIA3-204ENST00000602492 FIBPO43427 364 aa23.33■■□□□ 1.33
PPFIA3-204ENST00000602492 CAND2O75155 1236 aa23.33■■□□□ 1.33
PPFIA3-204ENST00000602492 GNAT1P11488 350 aa23.33■■□□□ 1.33
PPFIA3-204ENST00000602492 MKRN4PQ13434 485 aaPredicted RBP23.33■■□□□ 1.33
PPFIA3-204ENST00000602492 CYFIP1Q7L576 1253 aa23.33■■□□□ 1.33
PPFIA3-204ENST00000602492 SEPT8Q92599 483 aa23.33■■□□□ 1.33
PPFIA3-204ENST00000602492 RTEL1Q9NZ71 1219 aa23.33■■□□□ 1.33
PPFIA3-204ENST00000602492 MICAL3Q7RTP6 2002 aa23.33■■□□□ 1.32
PPFIA3-204ENST00000602492 SIP14410 1827 aa23.32■■□□□ 1.32
PPFIA3-204ENST00000602492 CTSHP09668 335 aa23.32■■□□□ 1.32
PPFIA3-204ENST00000602492 ANTXR2P58335 489 aa23.32■■□□□ 1.32
PPFIA3-204ENST00000602492 HTRA4P83105 476 aaPredicted RBP23.32■■□□□ 1.32
PPFIA3-204ENST00000602492 SEMA3FQ13275 785 aa23.32■■□□□ 1.32
PPFIA3-204ENST00000602492 FBXO22Q8NEZ5 403 aa23.32■■□□□ 1.32
PPFIA3-204ENST00000602492 SMARCC2Q8TAQ2 1214 aa23.32■■□□□ 1.32
PPFIA3-204ENST00000602492 CUL5Q93034 780 aa23.32■■□□□ 1.32
PPFIA3-204ENST00000602492 GPR20Q99678 358 aa23.32■■□□□ 1.32
PPFIA3-204ENST00000602492 ZNF215Q9UL58 517 aaPredicted RBP23.32■■□□□ 1.32
PPFIA3-204ENST00000602492 SGSM2O43147 1006 aa23.31■■□□□ 1.32
PPFIA3-204ENST00000602492 KIF5BP33176 963 aa23.31■■□□□ 1.32
PPFIA3-204ENST00000602492 MB21D2Q8IYB1 491 aaPredicted RBP23.31■■□□□ 1.32
PPFIA3-204ENST00000602492 CTCFLQ8NI51 663 aaPredicted RBP23.31■■□□□ 1.32
PPFIA3-204ENST00000602492 IGDCC4Q8TDY8 1250 aa23.31■■□□□ 1.32
PPFIA3-204ENST00000602492 RRP36Q96EU6 259 aaKnown RBP23.31■■□□□ 1.32
PPFIA3-204ENST00000602492 C17orf80Q9BSJ5 609 aa23.31■■□□□ 1.32
PPFIA3-204ENST00000602492 SPZ1Q9BXG8 430 aa23.31■■□□□ 1.32
PPFIA3-204ENST00000602492 DDAH1O94760 285 aa23.3■■□□□ 1.32
PPFIA3-204ENST00000602492 UTP14CQ5TAP6 766 aaKnown RBP23.3■■□□□ 1.32
PPFIA3-204ENST00000602492 XRRA1Q6P2D8 792 aa23.3■■□□□ 1.32
PPFIA3-204ENST00000602492 TRIM50Q86XT4 487 aa23.3■■□□□ 1.32
PPFIA3-204ENST00000602492 ZNF654Q8IZM8 581 aa23.3■■□□□ 1.32
PPFIA3-204ENST00000602492 SP7Q8TDD2 431 aaPredicted RBP23.3■■□□□ 1.32
PPFIA3-204ENST00000602492 MAP3K14Q99558 947 aa23.3■■□□□ 1.32
PPFIA3-204ENST00000602492 UBE2ZQ9H832 354 aaPredicted RBP23.3■■□□□ 1.32
PPFIA3-204ENST00000602492 SETD4Q9NVD3 440 aa23.3■■□□□ 1.32
PPFIA3-204ENST00000602492 SEC63Q9UGP8 760 aaKnown RBP23.3■■□□□ 1.32
PPFIA3-204ENST00000602492 PCNX4Q63HM2 1172 aa23.29■■□□□ 1.32
PPFIA3-204ENST00000602492 USP17L6PQ6QN14 398 aa23.29■■□□□ 1.32
PPFIA3-204ENST00000602492 SAMD11Q96NU1 681 aa23.29■■□□□ 1.32
PPFIA3-204ENST00000602492 YME1L1Q96TA2 773 aa23.29■■□□□ 1.32
PPFIA3-204ENST00000602492 SENP7Q9BQF6 1050 aa23.29■■□□□ 1.32
PPFIA3-204ENST00000602492 PIK3CDO00329 1044 aa23.28■■□□□ 1.32
PPFIA3-204ENST00000602492 SMARCA1P28370 1054 aa23.28■■□□□ 1.32
PPFIA3-204ENST00000602492 SP4Q02446 784 aa23.28■■□□□ 1.32
PPFIA3-204ENST00000602492 CASC1Q6TDU7 716 aa23.28■■□□□ 1.32
PPFIA3-204ENST00000602492 NLRX1Q86UT6 975 aa23.28■■□□□ 1.32
PPFIA3-204ENST00000602492 MAP4K1Q92918 833 aa23.28■■□□□ 1.32
PPFIA3-204ENST00000602492 LZTS2Q9BRK4 669 aa23.28■■□□□ 1.32
PPFIA3-204ENST00000602492 MYL10Q9BUA6 226 aa23.28■■□□□ 1.32
PPFIA3-204ENST00000602492 EPHX3Q9H6B9 360 aa23.28■■□□□ 1.32
PPFIA3-204ENST00000602492 LY9Q9HBG7 655 aa23.28■■□□□ 1.32
PPFIA3-204ENST00000602492 UPP2O95045 317 aa23.27■■□□□ 1.32
PPFIA3-204ENST00000602492 GNAQP50148 359 aa23.27■■□□□ 1.32
PPFIA3-204ENST00000602492 ARHGAP4P98171 946 aa23.27■■□□□ 1.32
PPFIA3-204ENST00000602492 PTPROQ16827 1216 aa23.27■■□□□ 1.32
PPFIA3-204ENST00000602492 GIMAP8Q8ND71 665 aaPredicted RBP23.27■■□□□ 1.32
PPFIA3-204ENST00000602492 LMBR1Q8WVP7 490 aa23.27■■□□□ 1.32
PPFIA3-204ENST00000602492 APBB2Q92870 758 aa23.27■■□□□ 1.32
PPFIA3-204ENST00000602492 TOP1MTQ969P6 601 aa23.27■■□□□ 1.32
PPFIA3-204ENST00000602492 MRPL38Q96DV4 380 aaKnown RBP23.27■■□□□ 1.32
PPFIA3-204ENST00000602492 RBM8AQ9Y5S9 174 aaKnown RBP23.27■■□□□ 1.32
PPFIA3-204ENST00000602492 DOCK5Q9H7D0 1870 aa23.27■■□□□ 1.32
PPFIA3-204ENST00000602492 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.26■■□□□ 1.31
PPFIA3-204ENST00000602492 MEIS2O14770 477 aa23.26■■□□□ 1.31
PPFIA3-204ENST00000602492 EPC2Q52LR7 807 aa23.26■■□□□ 1.31
PPFIA3-204ENST00000602492 MTA3Q9BTC8 594 aa23.26■■□□□ 1.31
PPFIA3-204ENST00000602492 OSBPL7Q9BZF2 842 aa23.26■■□□□ 1.31
PPFIA3-204ENST00000602492 TELO2Q9Y4R8 837 aa23.26■■□□□ 1.31
PPFIA3-204ENST00000602492 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms