RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CTCFLQ8NI51 663 aaPredicted RBP15.19■□□□□ 0.02
RPS28-204ENST00000602140 SMARCC2Q8TAQ2 1214 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 ATP6V0A1Q93050 837 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 RRP36Q96EU6 259 aaKnown RBP15.19■□□□□ 0.02
RPS28-204ENST00000602140 MAP3K14Q99558 947 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 SPZ1Q9BXG8 430 aa15.19■□□□□ 0.02
RPS28-204ENST00000602140 RSPH10B2B2RC85 870 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 FIBPO43427 364 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 PRC1O43663 620 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 LPXNO60711 386 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 DDAH1O94760 285 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 GJB5O95377 273 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 RSPH10BP0C881 870 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 SMIM10L2AP0DMW4 78 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 SMIM10L2BP0DMW5 78 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 BMP1P13497 986 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 SEMA3FQ13275 785 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 NEDD9Q14511 834 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 AAK1Q2M2I8 961 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 FAM117BQ6P1L5 589 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 METTL7BQ6UX53 244 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 CUL5Q93034 780 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 RAD9AQ99638 391 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 USP26Q9BXU7 913 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 RNPEPQ9H4A4 650 aa15.18■□□□□ 0.02
RPS28-204ENST00000602140 SEC63Q9UGP8 760 aaKnown RBP15.18■□□□□ 0.02
RPS28-204ENST00000602140 EMSYQ7Z589 1322 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 PRRC2BQ5JSZ5 2229 aaKnown RBP15.17■□□□□ 0.02
RPS28-204ENST00000602140 MEIS2O14770 477 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 TREHO43280 583 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 PLEKHA8P1O95397 391 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 SMARCA1P28370 1054 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 HOXC8P31273 242 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 KCNQ1P51787 676 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 PCNX4Q63HM2 1172 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.17■□□□□ 0.02
RPS28-204ENST00000602140 NFXL1Q6ZNB6 911 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 DBF4BQ8NFT6 615 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 NECAB3Q96P71 396 aaPredicted RBP15.17■□□□□ 0.02
RPS28-204ENST00000602140 GPR20Q99678 358 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 LZTS2Q9BRK4 669 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 MTA3Q9BTC8 594 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 MTUS1Q9ULD2 1270 aa15.17■□□□□ 0.02
RPS28-204ENST00000602140 CCDC69A6NI79 296 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 PIK3CDO00329 1044 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 RXRAP19793 462 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 MCM5P33992 734 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 GNAQP50148 359 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 SP4Q02446 784 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 COL9A3Q14050 684 aaPredicted RBP15.16■□□□□ 0.02
RPS28-204ENST00000602140 UTP14CQ5TAP6 766 aaKnown RBP15.16■□□□□ 0.02
RPS28-204ENST00000602140 TRIM50Q86XT4 487 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 CMTR1Q8N1G2 835 aaKnown RBP15.16■□□□□ 0.02
RPS28-204ENST00000602140 TMTC2Q8N394 836 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 SRBD1Q8N5C6 995 aaKnown RBP15.16■□□□□ 0.02
RPS28-204ENST00000602140 GDPD5Q8WTR4 605 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 TMEM87BQ96K49 555 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 TGS1Q96RS0 853 aaKnown RBP15.16■□□□□ 0.02
RPS28-204ENST00000602140 LSG1Q9H089 658 aaKnown RBP15.16■□□□□ 0.02
RPS28-204ENST00000602140 SETD4Q9NVD3 440 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 COG5Q9UP83 839 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 TELO2Q9Y4R8 837 aa15.16■□□□□ 0.02
RPS28-204ENST00000602140 COL4A4P53420 1690 aaPredicted RBP15.16■□□□□ 0.02
RPS28-204ENST00000602140 LINC01553A4QN01 128 aa15.15■□□□□ 0.02
RPS28-204ENST00000602140 SH2B2O14492 632 aaPredicted RBP15.15■□□□□ 0.02
RPS28-204ENST00000602140 SLC27A2O14975 620 aa15.15■□□□□ 0.02
RPS28-204ENST00000602140 CTSHP09668 335 aa15.15■□□□□ 0.02
RPS28-204ENST00000602140 GNAT1P11488 350 aa15.15■□□□□ 0.02
RPS28-204ENST00000602140 ERVK-21P61565 698 aa15.15■□□□□ 0.02
RPS28-204ENST00000602140 PLEKHG4Q58EX7 1191 aa15.15■□□□□ 0.02
RPS28-204ENST00000602140 XRRA1Q6P2D8 792 aa15.15■□□□□ 0.02
RPS28-204ENST00000602140 MYOCDQ8IZQ8 938 aa15.15■□□□□ 0.02
RPS28-204ENST00000602140 SENP7Q9BQF6 1050 aa15.15■□□□□ 0.02
RPS28-204ENST00000602140 SUGCTQ9HAC7 445 aa15.15■□□□□ 0.02
RPS28-204ENST00000602140 ZNF215Q9UL58 517 aaPredicted RBP15.15■□□□□ 0.02
RPS28-204ENST00000602140 INSL6Q9Y581 213 aa15.15■□□□□ 0.02
RPS28-204ENST00000602140 AMHP03971 560 aa15.14■□□□□ 0.01
RPS28-204ENST00000602140 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
RPS28-204ENST00000602140 NLRX1Q86UT6 975 aa15.14■□□□□ 0.01
RPS28-204ENST00000602140 RAB11FIP4Q86YS3 637 aa15.14■□□□□ 0.01
RPS28-204ENST00000602140 HLA-CQ95604 372 aa15.14■□□□□ 0.01
RPS28-204ENST00000602140 ESYT1Q9BSJ8 1104 aa15.14■□□□□ 0.01
RPS28-204ENST00000602140 OSBPL7Q9BZF2 842 aa15.14■□□□□ 0.01
RPS28-204ENST00000602140 PSTPIP2Q9H939 334 aa15.14■□□□□ 0.01
RPS28-204ENST00000602140 LMCD1Q9NZU5 365 aa15.14■□□□□ 0.01
RPS28-204ENST00000602140 DOCK5Q9H7D0 1870 aa15.14■□□□□ 0.01
RPS28-204ENST00000602140 hCG_1642624A0A1W2PR95 340 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 BDP1A6H8Y1 2624 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 CAND2O75155 1236 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 CALM1P0DP23 149 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 CALM2P0DP24 149 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 CALM3P0DP25 149 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 LIFRP42702 1097 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 ARHGAP4P98171 946 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 NECTIN1Q15223 517 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 CREB3L3Q68CJ9 461 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 CCDC82Q8N4S0 544 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 GIMAP8Q8ND71 665 aaPredicted RBP15.13■□□□□ 0.01
RPS28-204ENST00000602140 SEPT8Q92599 483 aa15.13■□□□□ 0.01
RPS28-204ENST00000602140 LRRC2Q9BYS8 371 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms