RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ZFP91Q96JP5 570 aaPredicted RBP19.5■□□□□ 0.71
USE1-208ENST00000600970 TUT1Q9H6E5 874 aaKnown RBP19.5■□□□□ 0.71
USE1-208ENST00000600970 MLXIPQ9HAP2 919 aa19.5■□□□□ 0.71
USE1-208ENST00000600970 POTEB3A0JP26 581 aa19.49■□□□□ 0.71
USE1-208ENST00000600970 DCXO43602 365 aa19.49■□□□□ 0.71
USE1-208ENST00000600970 SMIM10L2AP0DMW4 78 aa19.49■□□□□ 0.71
USE1-208ENST00000600970 SMIM10L2BP0DMW5 78 aa19.49■□□□□ 0.71
USE1-208ENST00000600970 TGFB3P10600 412 aa19.49■□□□□ 0.71
USE1-208ENST00000600970 HOXA13P31271 388 aaPredicted RBP19.49■□□□□ 0.71
USE1-208ENST00000600970 COL19A1Q14993 1142 aa19.49■□□□□ 0.71
USE1-208ENST00000600970 POTEBQ6S5H4 581 aa19.49■□□□□ 0.71
USE1-208ENST00000600970 EP400NLQ6ZTU2 488 aa19.49■□□□□ 0.71
USE1-208ENST00000600970 MTMR8Q96EF0 704 aa19.49■□□□□ 0.71
USE1-208ENST00000600970 RNPEPQ9H4A4 650 aa19.49■□□□□ 0.71
USE1-208ENST00000600970 NSUN3Q9H649 340 aaKnown RBP19.49■□□□□ 0.71
USE1-208ENST00000600970 BCAS3Q9H6U6 928 aa19.49■□□□□ 0.71
USE1-208ENST00000600970 DOCK5Q9H7D0 1870 aa19.48■□□□□ 0.71
USE1-208ENST00000600970 LGALS2P05162 132 aa19.48■□□□□ 0.71
USE1-208ENST00000600970 CTSHP09668 335 aa19.48■□□□□ 0.71
USE1-208ENST00000600970 CCND2P30279 289 aa19.48■□□□□ 0.71
USE1-208ENST00000600970 ZP2Q05996 745 aa19.48■□□□□ 0.71
USE1-208ENST00000600970 SAMD3Q8N6K7 520 aa19.48■□□□□ 0.71
USE1-208ENST00000600970 LNPKQ9C0E8 428 aa19.48■□□□□ 0.71
USE1-208ENST00000600970 PRKAG3Q9UGI9 489 aa19.48■□□□□ 0.71
USE1-208ENST00000600970 FAM50BQ9Y247 325 aa19.48■□□□□ 0.71
USE1-208ENST00000600970 PCDHA1Q9Y5I3 950 aa19.48■□□□□ 0.71
USE1-208ENST00000600970 C19orf67A6NJJ6 358 aa19.47■□□□□ 0.71
USE1-208ENST00000600970 KLRF2D3W0D1 207 aa19.47■□□□□ 0.71
USE1-208ENST00000600970 ZBTB5O15062 677 aa19.47■□□□□ 0.71
USE1-208ENST00000600970 CAND2O75155 1236 aa19.47■□□□□ 0.71
USE1-208ENST00000600970 HDAC1Q13547 482 aaPredicted RBP19.47■□□□□ 0.71
USE1-208ENST00000600970 CLDND1Q9NY35 253 aa19.47■□□□□ 0.71
USE1-208ENST00000600970 MRE11P49959 708 aa19.46■□□□□ 0.71
USE1-208ENST00000600970 IFIT1BQ5T764 474 aaKnown RBP19.46■□□□□ 0.71
USE1-208ENST00000600970 CWC27Q6UX04 472 aaKnown RBP19.46■□□□□ 0.71
USE1-208ENST00000600970 UBAC1Q9BSL1 405 aa19.46■□□□□ 0.71
USE1-208ENST00000600970 IFIH1Q9BYX4 1025 aaKnown RBP19.46■□□□□ 0.71
USE1-208ENST00000600970 KRT23Q9C075 422 aa19.46■□□□□ 0.71
USE1-208ENST00000600970 MAD2L2Q9UI95 211 aa19.46■□□□□ 0.71
USE1-208ENST00000600970 LTBRP36941 435 aa19.45■□□□□ 0.7
USE1-208ENST00000600970 NHLH1Q02575 133 aa19.45■□□□□ 0.7
USE1-208ENST00000600970 IMMTQ16891 758 aaKnown RBP19.45■□□□□ 0.7
USE1-208ENST00000600970 RPAINQ86UA6 219 aa19.45■□□□□ 0.7
USE1-208ENST00000600970 FCHSD1Q86WN1 690 aa19.45■□□□□ 0.7
USE1-208ENST00000600970 ADHFE1Q8IWW8 467 aa19.45■□□□□ 0.7
USE1-208ENST00000600970 APBB2Q92870 758 aa19.45■□□□□ 0.7
USE1-208ENST00000600970 FBXL18Q96ME1 805 aa19.45■□□□□ 0.7
USE1-208ENST00000600970 DSCC1Q9BVC3 393 aa19.45■□□□□ 0.7
USE1-208ENST00000600970 SETD4Q9NVD3 440 aa19.45■□□□□ 0.7
USE1-208ENST00000600970 PALM3A6NDB9 673 aaPredicted RBP19.44■□□□□ 0.7
USE1-208ENST00000600970 GCOM1H8Y6P7 765 aaPredicted RBP19.44■□□□□ 0.7
USE1-208ENST00000600970 NOP56O00567 594 aaKnown RBP19.44■□□□□ 0.7
USE1-208ENST00000600970 POLR2MP0CAP2 368 aa19.44■□□□□ 0.7
USE1-208ENST00000600970 GNAT1P11488 350 aa19.44■□□□□ 0.7
USE1-208ENST00000600970 SEC23AQ15436 765 aa19.44■□□□□ 0.7
USE1-208ENST00000600970 FAM26DQ5JW98 314 aa19.44■□□□□ 0.7
USE1-208ENST00000600970 HOMER1Q86YM7 354 aa19.44■□□□□ 0.7
USE1-208ENST00000600970 FIBCD1Q8N539 461 aa19.44■□□□□ 0.7
USE1-208ENST00000600970 IL17RAQ96F46 866 aa19.44■□□□□ 0.7
USE1-208ENST00000600970 USP26Q9BXU7 913 aa19.44■□□□□ 0.7
USE1-208ENST00000600970 KCNH6Q9H252 994 aa19.44■□□□□ 0.7
USE1-208ENST00000600970 CNNM2Q9H8M5 875 aa19.44■□□□□ 0.7
USE1-208ENST00000600970 MUC6Q6W4X9 2439 aa19.44■□□□□ 0.7
USE1-208ENST00000600970 C5orf67F2Z3F1 127 aa19.43■□□□□ 0.7
USE1-208ENST00000600970 LINC00271P0C7V0 271 aa19.43■□□□□ 0.7
USE1-208ENST00000600970 CTNNB1P35222 781 aa19.43■□□□□ 0.7
USE1-208ENST00000600970 IRS1P35568 1242 aa19.43■□□□□ 0.7
USE1-208ENST00000600970 ADAM17P78536 824 aa19.43■□□□□ 0.7
USE1-208ENST00000600970 MRPS9P82933 396 aaKnown RBP19.43■□□□□ 0.7
USE1-208ENST00000600970 SLC35G1Q2M3R5 365 aa19.43■□□□□ 0.7
USE1-208ENST00000600970 CTC1Q2NKJ3 1217 aa19.43■□□□□ 0.7
USE1-208ENST00000600970 GPR20Q99678 358 aa19.43■□□□□ 0.7
USE1-208ENST00000600970 DIAPH3Q9NSV4 1193 aa19.43■□□□□ 0.7
USE1-208ENST00000600970 C5orf42Q9H799 3197 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 WDFY4Q6ZS81 3184 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 NCK2O43639 380 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 RB1P06400 928 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 ICAM3P32942 547 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 RRP1P56182 461 aaKnown RBP19.42■□□□□ 0.7
USE1-208ENST00000600970 SEMA3FQ13275 785 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 NEDD9Q14511 834 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 GNPTABQ3T906 1256 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 METTL7BQ6UX53 244 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 CYFIP1Q7L576 1253 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 TRIM50Q86XT4 487 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 PIGSQ96S52 555 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 LMAN2LQ9H0V9 348 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 RIOX1Q9H6W3 641 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 TELO2Q9Y4R8 837 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 FRMPD4Q14CM0 1322 aa19.42■□□□□ 0.7
USE1-208ENST00000600970 GRM6O15303 877 aa19.41■□□□□ 0.7
USE1-208ENST00000600970 MBTPS2O43462 519 aa19.41■□□□□ 0.7
USE1-208ENST00000600970 BMPR1AP36894 532 aa19.41■□□□□ 0.7
USE1-208ENST00000600970 DLX2Q07687 328 aaPredicted RBP19.41■□□□□ 0.7
USE1-208ENST00000600970 HYAL1Q12794 435 aa19.41■□□□□ 0.7
USE1-208ENST00000600970 SMAD2Q15796 467 aaKnown RBP19.41■□□□□ 0.7
USE1-208ENST00000600970 CLUL1Q15846 466 aa19.41■□□□□ 0.7
USE1-208ENST00000600970 HFE2Q6ZVN8 426 aa19.41■□□□□ 0.7
USE1-208ENST00000600970 CYB5R4Q7L1T6 521 aa19.41■□□□□ 0.7
USE1-208ENST00000600970 LMBR1Q8WVP7 490 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms