RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 COBLL1Q53SF7 1204 aa22.39■■□□□ 1.18
PNKP-214ENST00000600573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.39■■□□□ 1.18
PNKP-214ENST00000600573 NLRX1Q86UT6 975 aa22.39■■□□□ 1.18
PNKP-214ENST00000600573 VSIG10LQ86VR7 867 aa22.39■■□□□ 1.18
PNKP-214ENST00000600573 DNERQ8NFT8 737 aa22.39■■□□□ 1.18
PNKP-214ENST00000600573 GJA10Q969M2 543 aa22.39■■□□□ 1.18
PNKP-214ENST00000600573 ASCC2Q9H1I8 757 aaPredicted RBP22.39■■□□□ 1.18
PNKP-214ENST00000600573 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.39■■□□□ 1.18
PNKP-214ENST00000600573 PPP1R3GB7ZBB8 358 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 SERPINC1P01008 464 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 ATP1A3P13637 1013 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 GSDMDP57764 484 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 ASIC1P78348 528 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 DHX8Q14562 1220 aaKnown RBP22.39■■□□□ 1.17
PNKP-214ENST00000600573 MCM6Q14566 821 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 EPHA7Q15375 998 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 UNC13DQ70J99 1090 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 CATSPER3Q86XQ3 398 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 TRMT44Q8IYL2 757 aaKnown RBP22.39■■□□□ 1.17
PNKP-214ENST00000600573 GIMAP8Q8ND71 665 aaPredicted RBP22.39■■□□□ 1.17
PNKP-214ENST00000600573 LRRC15Q8TF66 581 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 CDHR1Q96JP9 859 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 SPATC1LQ9H0A9 340 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 GBA2Q9HCG7 927 aaPredicted RBP22.39■■□□□ 1.17
PNKP-214ENST00000600573 KCNH7Q9NS40 1196 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 EXOC1Q9NV70 894 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 NRBP1Q9UHY1 535 aa22.39■■□□□ 1.17
PNKP-214ENST00000600573 ARP10275 920 aa22.38■■□□□ 1.17
PNKP-214ENST00000600573 CETPP11597 493 aa22.38■■□□□ 1.17
PNKP-214ENST00000600573 EIF2AK2P19525 551 aaKnown RBP22.38■■□□□ 1.17
PNKP-214ENST00000600573 GTF2A2P52657 109 aa22.38■■□□□ 1.17
PNKP-214ENST00000600573 MRPS9P82933 396 aaKnown RBP22.38■■□□□ 1.17
PNKP-214ENST00000600573 MTMR1Q13613 665 aa22.38■■□□□ 1.17
PNKP-214ENST00000600573 MOGSQ13724 837 aa22.38■■□□□ 1.17
PNKP-214ENST00000600573 SPATA1Q5VX52 437 aa22.38■■□□□ 1.17
PNKP-214ENST00000600573 B3GNT9Q6UX72 402 aa22.38■■□□□ 1.17
PNKP-214ENST00000600573 GPRASP2Q96D09 838 aa22.38■■□□□ 1.17
PNKP-214ENST00000600573 HSD17B14Q9BPX1 270 aa22.38■■□□□ 1.17
PNKP-214ENST00000600573 EIF2AK1Q9BQI3 630 aaKnown RBP22.38■■□□□ 1.17
PNKP-214ENST00000600573 A1CFQ9NQ94 594 aaKnown RBP22.38■■□□□ 1.17
PNKP-214ENST00000600573 RWDD2AQ9UIY3 292 aa22.38■■□□□ 1.17
PNKP-214ENST00000600573 B4DLN1 442 aa22.37■■□□□ 1.17
PNKP-214ENST00000600573 MED24O75448 989 aa22.37■■□□□ 1.17
PNKP-214ENST00000600573 NR3C2P08235 984 aa22.37■■□□□ 1.17
PNKP-214ENST00000600573 PLA2G4BP0C869 781 aa22.37■■□□□ 1.17
PNKP-214ENST00000600573 POTEIP0CG38 1075 aa22.37■■□□□ 1.17
PNKP-214ENST00000600573 POTEJP0CG39 1038 aa22.37■■□□□ 1.17
PNKP-214ENST00000600573 CD44P16070 742 aaKnown RBP22.37■■□□□ 1.17
PNKP-214ENST00000600573 ZNF18P17022 549 aa22.37■■□□□ 1.17
PNKP-214ENST00000600573 ECM1Q16610 540 aa22.37■■□□□ 1.17
PNKP-214ENST00000600573 CCDC144BQ3MJ40 725 aa22.37■■□□□ 1.17
PNKP-214ENST00000600573 AGO4Q9HCK5 861 aaKnown RBP22.37■■□□□ 1.17
PNKP-214ENST00000600573 PTPRFP10586 1907 aa22.36■■□□□ 1.17
PNKP-214ENST00000600573 TRAF5O00463 557 aa22.36■■□□□ 1.17
PNKP-214ENST00000600573 SPATA31C1P0DKV0 1188 aa22.36■■□□□ 1.17
PNKP-214ENST00000600573 UBASH3AP57075 661 aa22.36■■□□□ 1.17
PNKP-214ENST00000600573 KLHL10Q6JEL2 608 aa22.36■■□□□ 1.17
PNKP-214ENST00000600573 DHTKD1Q96HY7 919 aaPredicted RBP22.36■■□□□ 1.17
PNKP-214ENST00000600573 ZNF408Q9H9D4 720 aa22.36■■□□□ 1.17
PNKP-214ENST00000600573 BTBD7Q9P203 1132 aa22.36■■□□□ 1.17
PNKP-214ENST00000600573 CTNND2Q9UQB3 1225 aa22.36■■□□□ 1.17
PNKP-214ENST00000600573 POTEB3A0JP26 581 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 MYMKA6NI61 221 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 PDE4DQ08499 809 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 GPAT2Q6NUI2 795 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 POTEBQ6S5H4 581 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 SMYD4Q8IYR2 804 aaPredicted RBP22.35■■□□□ 1.17
PNKP-214ENST00000600573 ADSSL1Q8N142 457 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 ANKRD35Q8N283 1001 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 SYT2Q8N9I0 419 aaPredicted RBP22.35■■□□□ 1.17
PNKP-214ENST00000600573 TCEAL9Q9UHQ7 104 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 PSMA7O14818 248 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 MYCLP12524 364 aaPredicted RBP22.35■■□□□ 1.17
PNKP-214ENST00000600573 PAK1Q13153 545 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 TMC6Q7Z403 805 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 KCNK18Q7Z418 384 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 RDM1Q8NG50 284 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 IL31RAQ8NI17 732 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 DDX12PQ92771 950 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 MED15Q96RN5 788 aa22.35■■□□□ 1.17
PNKP-214ENST00000600573 MPHOSPH6Q99547 160 aaKnown RBP22.35■■□□□ 1.17
PNKP-214ENST00000600573 ADD3Q9UEY8 706 aaKnown RBP22.35■■□□□ 1.17
PNKP-214ENST00000600573 EYA4O95677 639 aa22.34■■□□□ 1.17
PNKP-214ENST00000600573 ZBTB48P10074 688 aaPredicted RBP22.34■■□□□ 1.17
PNKP-214ENST00000600573 CDK11BP21127 795 aaKnown RBP22.34■■□□□ 1.17
PNKP-214ENST00000600573 GNPTABQ3T906 1256 aa22.34■■□□□ 1.17
PNKP-214ENST00000600573 CCDC65Q8IXS2 484 aa22.34■■□□□ 1.17
PNKP-214ENST00000600573 CCDC150Q8NCX0 1101 aa22.34■■□□□ 1.17
PNKP-214ENST00000600573 INPP4AQ96PE3 977 aaPredicted RBP22.34■■□□□ 1.17
PNKP-214ENST00000600573 NACC1Q96RE7 527 aa22.34■■□□□ 1.17
PNKP-214ENST00000600573 A0A0G2JMZ2 1700 aa22.33■■□□□ 1.17
PNKP-214ENST00000600573 E9PMD0 336 aa22.33■■□□□ 1.17
PNKP-214ENST00000600573 EML1O00423 815 aa22.33■■□□□ 1.17
PNKP-214ENST00000600573 SLITRK3O94933 977 aa22.33■■□□□ 1.17
PNKP-214ENST00000600573 SFNP31947 248 aa22.33■■□□□ 1.17
PNKP-214ENST00000600573 GJA5P36382 358 aa22.33■■□□□ 1.17
PNKP-214ENST00000600573 SLC12A3P55017 1021 aa22.33■■□□□ 1.17
PNKP-214ENST00000600573 FILIP1Q7Z7B0 1213 aa22.33■■□□□ 1.17
PNKP-214ENST00000600573 SHCBP1Q8NEM2 672 aa22.33■■□□□ 1.17
PNKP-214ENST00000600573 UNC45AQ9H3U1 944 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms