RNA–Protein interactions for RNA: ENST00000600447.1

PPFIA4-212, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-212ENST00000600447 CXXC1Q9P0U4 656 aaPredicted RBP16.53■□□□□ 0.24
PPFIA4-212ENST00000600447 NAP1L2Q9ULW6 460 aaPredicted RBP16.53■□□□□ 0.24
PPFIA4-212ENST00000600447 CHD7Q9P2D1 2997 aa16.53■□□□□ 0.24
PPFIA4-212ENST00000600447 STXBP3O00186 592 aa16.52■□□□□ 0.24
PPFIA4-212ENST00000600447 LGALS2P05162 132 aa16.52■□□□□ 0.24
PPFIA4-212ENST00000600447 RBL2Q08999 1139 aa16.52■□□□□ 0.24
PPFIA4-212ENST00000600447 TYW1BQ6NUM6 668 aa16.52■□□□□ 0.24
PPFIA4-212ENST00000600447 GIMAP8Q8ND71 665 aaPredicted RBP16.52■□□□□ 0.24
PPFIA4-212ENST00000600447 AFAP1L1Q8TED9 768 aa16.52■□□□□ 0.24
PPFIA4-212ENST00000600447 USP26Q9BXU7 913 aa16.52■□□□□ 0.24
PPFIA4-212ENST00000600447 BARHL2Q9NY43 387 aa16.52■□□□□ 0.24
PPFIA4-212ENST00000600447 PCDHA6Q9UN73 950 aa16.52■□□□□ 0.24
PPFIA4-212ENST00000600447 PCDHA8Q9Y5H6 950 aa16.52■□□□□ 0.24
PPFIA4-212ENST00000600447 UNC80Q8N2C7 3258 aa16.52■□□□□ 0.23
PPFIA4-212ENST00000600447 PRUNE2Q8WUY3 3088 aa16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 GRXCR1A8MXD5 290 aa16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 H3BRB1 525 aa16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 ADD1P35611 737 aaKnown RBP16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 PTK7Q13308 1070 aa16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 DEFB128Q7Z7B8 93 aa16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 DHX38Q92620 1227 aaKnown RBP16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 TIFAQ96CG3 184 aa16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 CDX2Q99626 313 aaPredicted RBP16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 GPR20Q99678 358 aa16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 PBX4Q9BYU1 374 aa16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 GLT8D2Q9H1C3 349 aa16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 TUT1Q9H6E5 874 aaKnown RBP16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 UBIAD1Q9Y5Z9 338 aa16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 SLC4A7Q9Y6M7 1214 aa16.51■□□□□ 0.23
PPFIA4-212ENST00000600447 PARNO95453 639 aaKnown RBP16.5■□□□□ 0.23
PPFIA4-212ENST00000600447 FOSP01100 380 aaPredicted RBP16.5■□□□□ 0.23
PPFIA4-212ENST00000600447 ACTN1P12814 892 aa16.5■□□□□ 0.23
PPFIA4-212ENST00000600447 SELPP16109 830 aa16.5■□□□□ 0.23
PPFIA4-212ENST00000600447 ITGB5P18084 799 aa16.5■□□□□ 0.23
PPFIA4-212ENST00000600447 ADCY7P51828 1080 aa16.5■□□□□ 0.23
PPFIA4-212ENST00000600447 RAB30Q15771 203 aa16.5■□□□□ 0.23
PPFIA4-212ENST00000600447 TRANK1O15050 2925 aa16.5■□□□□ 0.23
PPFIA4-212ENST00000600447 SMCO2A6NFE2 343 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 ZBBXA8MT70 800 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 MAFGO15525 162 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 CKBP12277 381 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 KCNA2P16389 499 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 HOXC8P31273 242 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 PBX2P40425 430 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 EVCP57679 992 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 MTMR1Q13613 665 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 PFKFB3Q16875 520 aaPredicted RBP16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 RUFY3Q7L099 469 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 LRRC8DQ7L1W4 858 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 ZNF576Q9H609 170 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 ZSWIM6Q9HCJ5 1215 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 MSRAQ9UJ68 235 aa16.49■□□□□ 0.23
PPFIA4-212ENST00000600447 ATP9AO75110 1047 aa16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 SMIM10L2AP0DMW4 78 aa16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 SMIM10L2BP0DMW5 78 aa16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 SCG2P13521 617 aa16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 CLK2P49760 499 aaKnown RBP16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 ZNF200P98182 395 aaPredicted RBP16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 AP3B2Q13367 1082 aa16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 HIC1Q14526 733 aa16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 TRIM71Q2Q1W2 868 aaKnown RBP16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 SERINC5Q86VE9 423 aa16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 FTOQ9C0B1 505 aaKnown RBP eCLIP16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 JADE2Q9NQC1 790 aa16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 ZNF215Q9UL58 517 aaPredicted RBP16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 TELO2Q9Y4R8 837 aa16.48■□□□□ 0.23
PPFIA4-212ENST00000600447 PTPRSQ13332 1948 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 ESYT2A0FGR8 921 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 C17orf102A2RUQ5 167 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 PRPF3O43395 683 aaKnown RBP16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 CXCL10P02778 98 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 ATP2A2P16615 1042 aaKnown RBP16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 SP4Q02446 784 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 GRIN2CQ14957 1233 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 SLC17A8Q8NDX2 589 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 MYLIPQ8WY64 445 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 ATP6V0A1Q93050 837 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 MXRA8Q9BRK3 442 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 ANO3Q9BYT9 981 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 TM6SF1Q9BZW5 370 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 CYP46A1Q9Y6A2 500 aa16.47■□□□□ 0.23
PPFIA4-212ENST00000600447 BAIAP3O94812 1187 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 GNAT1P11488 350 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 PDIA3P30101 505 aaKnown RBP16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 TCF7P36402 384 aaPredicted RBP16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 SREBF1P36956 1147 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 TOB2Q14106 344 aaPredicted RBP16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 GPNMBQ14956 572 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 NTRK3Q16288 839 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 PKN1Q16512 942 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 ZNF618Q5T7W0 954 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 UTP14CQ5TAP6 766 aaKnown RBP16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 TRIM50Q86XT4 487 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 SEPT1Q8WYJ6 367 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 WNT8BQ93098 351 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 PGBD1Q96JS3 809 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 ZMYND12Q9H0C1 365 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 RNPEPQ9H4A4 650 aa16.46■□□□□ 0.23
PPFIA4-212ENST00000600447 KCNH7Q9NS40 1196 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms