RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 RBM8AQ9Y5S9 174 aaKnown RBP16.86■□□□□ 0.29
EBI3-202ENST00000599339 TAF6LQ9Y6J9 622 aa16.86■□□□□ 0.29
EBI3-202ENST00000599339 CAND2O75155 1236 aa16.85■□□□□ 0.29
EBI3-202ENST00000599339 ARHGEF15O94989 841 aa16.85■□□□□ 0.29
EBI3-202ENST00000599339 AMHP03971 560 aa16.85■□□□□ 0.29
EBI3-202ENST00000599339 ANTXR2P58335 489 aa16.85■□□□□ 0.29
EBI3-202ENST00000599339 MRPS9P82933 396 aaKnown RBP16.85■□□□□ 0.29
EBI3-202ENST00000599339 GRB10Q13322 594 aa16.85■□□□□ 0.29
EBI3-202ENST00000599339 NFXL1Q6ZNB6 911 aa16.85■□□□□ 0.29
EBI3-202ENST00000599339 GPKOWQ92917 476 aaPredicted RBP eCLIP16.85■□□□□ 0.29
EBI3-202ENST00000599339 WNT8BQ93098 351 aa16.85■□□□□ 0.29
EBI3-202ENST00000599339 ZNF215Q9UL58 517 aaPredicted RBP16.85■□□□□ 0.29
EBI3-202ENST00000599339 PTPRSQ13332 1948 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 LCHNA4D1U4 455 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 SPATA31C2B4DYI2 1134 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 SMIM10L2AP0DMW4 78 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 SMIM10L2BP0DMW5 78 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 MCM5P33992 734 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 TFF2Q03403 129 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 MBTPS1Q14703 1052 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 PCNX4Q63HM2 1172 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 CYFIP1Q7L576 1253 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 TMCO2Q7Z6W1 182 aaPredicted RBP16.84■□□□□ 0.29
EBI3-202ENST00000599339 NLRX1Q86UT6 975 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 GIMAP8Q8ND71 665 aaPredicted RBP16.84■□□□□ 0.29
EBI3-202ENST00000599339 TMEM87BQ96K49 555 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 TGS1Q96RS0 853 aaKnown RBP16.84■□□□□ 0.29
EBI3-202ENST00000599339 LY9Q9HBG7 655 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 RTEL1Q9NZ71 1219 aa16.84■□□□□ 0.29
EBI3-202ENST00000599339 BDP1A6H8Y1 2624 aa16.83■□□□□ 0.29
EBI3-202ENST00000599339 PIK3CDO00329 1044 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 PRC1O43663 620 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 CALM1P0DP23 149 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 CALM2P0DP24 149 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 CALM3P0DP25 149 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 BMP1P13497 986 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 HOXC8P31273 242 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 KRT40Q6A162 431 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 FAM117BQ6P1L5 589 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 DBF4BQ8NFT6 615 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 HLA-CQ95604 372 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 GPR20Q99678 358 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 SENP7Q9BQF6 1050 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 MYL10Q9BUA6 226 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 INSL6Q9Y581 213 aa16.83■□□□□ 0.28
EBI3-202ENST00000599339 TREHO43280 583 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 LPXNO60711 386 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 ERVK-21P61565 698 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 HIC1Q14526 733 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 TCTN1Q2MV58 587 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 USP17L6PQ6QN14 398 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 MYOCDQ8IZQ8 938 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 GDPD5Q8WTR4 605 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 SEPT8Q92599 483 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 CDHR1Q96JP9 859 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 RNPEPQ9H4A4 650 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 MTUS1Q9ULD2 1270 aa16.82■□□□□ 0.28
EBI3-202ENST00000599339 COL4A4P53420 1690 aaPredicted RBP16.81■□□□□ 0.28
EBI3-202ENST00000599339 LINC01553A4QN01 128 aa16.81■□□□□ 0.28
EBI3-202ENST00000599339 MEIS2O14770 477 aa16.81■□□□□ 0.28
EBI3-202ENST00000599339 KCNQ1P51787 676 aa16.81■□□□□ 0.28
EBI3-202ENST00000599339 IRX6P78412 446 aaPredicted RBP16.81■□□□□ 0.28
EBI3-202ENST00000599339 SEMA3FQ13275 785 aa16.81■□□□□ 0.28
EBI3-202ENST00000599339 PLEKHG4Q58EX7 1191 aa16.81■□□□□ 0.28
EBI3-202ENST00000599339 UTP14CQ5TAP6 766 aaKnown RBP16.81■□□□□ 0.28
EBI3-202ENST00000599339 BCAS3Q9H6U6 928 aa16.81■□□□□ 0.28
EBI3-202ENST00000599339 PSTPIP2Q9H939 334 aa16.81■□□□□ 0.28
EBI3-202ENST00000599339 MUC3AQ02505 3323 aa16.81■□□□□ 0.28
EBI3-202ENST00000599339 SH2B2O14492 632 aaPredicted RBP16.8■□□□□ 0.28
EBI3-202ENST00000599339 CTSHP09668 335 aa16.8■□□□□ 0.28
EBI3-202ENST00000599339 LIFRP42702 1097 aa16.8■□□□□ 0.28
EBI3-202ENST00000599339 SP4Q02446 784 aa16.8■□□□□ 0.28
EBI3-202ENST00000599339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.8■□□□□ 0.28
EBI3-202ENST00000599339 SPRED2Q7Z698 418 aa16.8■□□□□ 0.28
EBI3-202ENST00000599339 APBB2Q92870 758 aa16.8■□□□□ 0.28
EBI3-202ENST00000599339 GPRASP2Q96D09 838 aa16.8■□□□□ 0.28
EBI3-202ENST00000599339 SUGCTQ9HAC7 445 aa16.8■□□□□ 0.28
EBI3-202ENST00000599339 SETD4Q9NVD3 440 aa16.8■□□□□ 0.28
EBI3-202ENST00000599339 SLC12A7Q9Y666 1083 aa16.8■□□□□ 0.28
EBI3-202ENST00000599339 TCF20Q9UGU0 1960 aaKnown RBP16.8■□□□□ 0.28
EBI3-202ENST00000599339 MICAL3Q7RTP6 2002 aa16.79■□□□□ 0.28
EBI3-202ENST00000599339 NRCAMQ92823 1304 aa16.79■□□□□ 0.28
EBI3-202ENST00000599339 SPDYE3A6NKU9 549 aa16.79■□□□□ 0.28
EBI3-202ENST00000599339 PLEKHA8P1O95397 391 aa16.79■□□□□ 0.28
EBI3-202ENST00000599339 ARHGAP4P98171 946 aa16.79■□□□□ 0.28
EBI3-202ENST00000599339 TRIM50Q86XT4 487 aa16.79■□□□□ 0.28
EBI3-202ENST00000599339 SRBD1Q8N5C6 995 aaKnown RBP16.79■□□□□ 0.28
EBI3-202ENST00000599339 FBXO22Q8NEZ5 403 aa16.79■□□□□ 0.28
EBI3-202ENST00000599339 SAMD11Q96NU1 681 aa16.79■□□□□ 0.28
EBI3-202ENST00000599339 SIP14410 1827 aa16.79■□□□□ 0.28
EBI3-202ENST00000599339 DOCK5Q9H7D0 1870 aa16.78■□□□□ 0.28
EBI3-202ENST00000599339 SLC27A2O14975 620 aa16.78■□□□□ 0.28
EBI3-202ENST00000599339 COL9A1P20849 921 aa16.78■□□□□ 0.28
EBI3-202ENST00000599339 HTRA4P83105 476 aaPredicted RBP16.78■□□□□ 0.28
EBI3-202ENST00000599339 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
EBI3-202ENST00000599339 SYNE3Q6ZMZ3 975 aa16.78■□□□□ 0.28
EBI3-202ENST00000599339 RSPH3Q86UC2 560 aa16.78■□□□□ 0.28
EBI3-202ENST00000599339 LMBR1Q8WVP7 490 aa16.78■□□□□ 0.28
EBI3-202ENST00000599339 NECAB3Q96P71 396 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms