RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 HAS3O00219 553 aa16.73■□□□□ 0.27
XRCC1-208ENST00000598422 ACTN1P12814 892 aa16.73■□□□□ 0.27
XRCC1-208ENST00000598422 ITGB5P18084 799 aa16.73■□□□□ 0.27
XRCC1-208ENST00000598422 DNAJB2P25686 324 aa16.73■□□□□ 0.27
XRCC1-208ENST00000598422 AFAP1L1Q8TED9 768 aa16.73■□□□□ 0.27
XRCC1-208ENST00000598422 PGBD1Q96JS3 809 aa16.73■□□□□ 0.27
XRCC1-208ENST00000598422 GPR20Q99678 358 aa16.73■□□□□ 0.27
XRCC1-208ENST00000598422 UPF3BQ9BZI7 483 aaKnown RBP16.73■□□□□ 0.27
XRCC1-208ENST00000598422 FTOQ9C0B1 505 aaKnown RBP eCLIP16.73■□□□□ 0.27
XRCC1-208ENST00000598422 UBIAD1Q9Y5Z9 338 aa16.73■□□□□ 0.27
XRCC1-208ENST00000598422 SCN10AQ9Y5Y9 1956 aa16.72■□□□□ 0.27
XRCC1-208ENST00000598422 TMEM265A0A087WTH1 108 aa16.72■□□□□ 0.27
XRCC1-208ENST00000598422 H3BRB1 525 aa16.72■□□□□ 0.27
XRCC1-208ENST00000598422 IQCF3P0C7M6 154 aa16.72■□□□□ 0.27
XRCC1-208ENST00000598422 UTP14CQ5TAP6 766 aaKnown RBP16.72■□□□□ 0.27
XRCC1-208ENST00000598422 RASIP1Q5U651 963 aa16.72■□□□□ 0.27
XRCC1-208ENST00000598422 PHKBQ93100 1093 aa16.72■□□□□ 0.27
XRCC1-208ENST00000598422 C16orf70Q9BSU1 422 aa16.72■□□□□ 0.27
XRCC1-208ENST00000598422 SLC26A6Q9BXS9 759 aa16.72■□□□□ 0.27
XRCC1-208ENST00000598422 TM6SF1Q9BZW5 370 aa16.72■□□□□ 0.27
XRCC1-208ENST00000598422 TUT1Q9H6E5 874 aaKnown RBP16.72■□□□□ 0.27
XRCC1-208ENST00000598422 JADE2Q9NQC1 790 aa16.72■□□□□ 0.27
XRCC1-208ENST00000598422 STXBP5LQ9Y2K9 1186 aa16.72■□□□□ 0.27
XRCC1-208ENST00000598422 C17orf102A2RUQ5 167 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 CPLX1O14810 134 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 MAFGO15525 162 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 PRPF3O43395 683 aaKnown RBP16.71■□□□□ 0.27
XRCC1-208ENST00000598422 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
XRCC1-208ENST00000598422 SELPP16109 830 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 KCNA2P16389 499 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 PDIA3P30101 505 aaKnown RBP16.71■□□□□ 0.27
XRCC1-208ENST00000598422 ZNF76P36508 570 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 CCT2P78371 535 aaKnown RBP16.71■□□□□ 0.27
XRCC1-208ENST00000598422 PTK7Q13308 1070 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 LRRC8DQ7L1W4 858 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 TRIM50Q86XT4 487 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 TRIM22Q8IYM9 498 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 CCDC148Q8NFR7 591 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 TIFAQ96CG3 184 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 RNF26Q9BY78 433 aaPredicted RBP16.71■□□□□ 0.27
XRCC1-208ENST00000598422 BCAS3Q9H6U6 928 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 NCOA5Q9HCD5 579 aaKnown RBP16.71■□□□□ 0.27
XRCC1-208ENST00000598422 C6orf50Q9HD87 102 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 PDRG1Q9NUG6 133 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 CXXC1Q9P0U4 656 aaPredicted RBP16.71■□□□□ 0.27
XRCC1-208ENST00000598422 SLC4A7Q9Y6M7 1214 aa16.71■□□□□ 0.27
XRCC1-208ENST00000598422 ESYT2A0FGR8 921 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 SMIM10L2AP0DMW4 78 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 SMIM10L2BP0DMW5 78 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 GNAT1P11488 350 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 IFNAR1P17181 557 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 GNA11P29992 359 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 SREBF1P36956 1147 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 RAB30Q15771 203 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 JAKMIP3Q5VZ66 844 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 CPLX2Q6PUV4 134 aaKnown RBP16.7■□□□□ 0.26
XRCC1-208ENST00000598422 REXO1Q8N1G1 1221 aaKnown RBP16.7■□□□□ 0.26
XRCC1-208ENST00000598422 CTAGE1Q96RT6 745 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 MXRA8Q9BRK3 442 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 SDF4Q9BRK5 362 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 SEMA6BQ9H3T3 888 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 JPH1Q9HDC5 661 aaPredicted RBP16.7■□□□□ 0.26
XRCC1-208ENST00000598422 TMEM260Q9NX78 707 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 MSRAQ9UJ68 235 aa16.7■□□□□ 0.26
XRCC1-208ENST00000598422 GRXCR1A8MXD5 290 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 ATP9AO75110 1047 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 PPFIA3O75145 1194 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 PARNO95453 639 aaKnown RBP16.69■□□□□ 0.26
XRCC1-208ENST00000598422 CKBP12277 381 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 TCF7P36402 384 aaPredicted RBP16.69■□□□□ 0.26
XRCC1-208ENST00000598422 EVCP57679 992 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 ZNF200P98182 395 aaPredicted RBP16.69■□□□□ 0.26
XRCC1-208ENST00000598422 TOB2Q14106 344 aaPredicted RBP16.69■□□□□ 0.26
XRCC1-208ENST00000598422 CEP55Q53EZ4 464 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 MCTP2Q6DN12 878 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 BICD2Q8TD16 824 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 SEPT1Q8WYJ6 367 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 DHX38Q92620 1227 aaKnown RBP16.69■□□□□ 0.26
XRCC1-208ENST00000598422 ATP6V0A1Q93050 837 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 GUCD1Q96NT3 240 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 PBX4Q9BYU1 374 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 ZMYND12Q9H0C1 365 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 KCNH7Q9NS40 1196 aa16.69■□□□□ 0.26
XRCC1-208ENST00000598422 KIAA1217Q5T5P2 1943 aa16.68■□□□□ 0.26
XRCC1-208ENST00000598422 ATP2A2P16615 1042 aaKnown RBP16.68■□□□□ 0.26
XRCC1-208ENST00000598422 PBX2P40425 430 aa16.68■□□□□ 0.26
XRCC1-208ENST00000598422 ARHGAP4P98171 946 aa16.68■□□□□ 0.26
XRCC1-208ENST00000598422 RBL2Q08999 1139 aa16.68■□□□□ 0.26
XRCC1-208ENST00000598422 NTRK3Q16288 839 aa16.68■□□□□ 0.26
XRCC1-208ENST00000598422 PKN1Q16512 942 aa16.68■□□□□ 0.26
XRCC1-208ENST00000598422 GLG1Q92896 1179 aa16.68■□□□□ 0.26
XRCC1-208ENST00000598422 ZNF274Q96GC6 653 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-208ENST00000598422 LARP6Q9BRS8 491 aaKnown RBP16.68■□□□□ 0.26
XRCC1-208ENST00000598422 TTYH1Q9H313 450 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-208ENST00000598422 THPOP40225 353 aa16.67■□□□□ 0.26
XRCC1-208ENST00000598422 CLK2P49760 499 aaKnown RBP16.67■□□□□ 0.26
XRCC1-208ENST00000598422 ANAPC15P60006 121 aa16.67■□□□□ 0.26
XRCC1-208ENST00000598422 SSRP1Q08945 709 aaKnown RBP16.67■□□□□ 0.26
XRCC1-208ENST00000598422 STK3Q13188 491 aa16.67■□□□□ 0.26
XRCC1-208ENST00000598422 SERINC5Q86VE9 423 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms