RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 PTK7Q13308 1070 aa17.29■□□□□ 0.36
LIG1-215ENST00000597901 GPNMBQ14956 572 aa17.29■□□□□ 0.36
LIG1-215ENST00000597901 GRIN2CQ14957 1233 aa17.29■□□□□ 0.36
LIG1-215ENST00000597901 GIMAP8Q8ND71 665 aaPredicted RBP17.29■□□□□ 0.36
LIG1-215ENST00000597901 AFAP1L1Q8TED9 768 aa17.29■□□□□ 0.36
LIG1-215ENST00000597901 GPRASP2Q96D09 838 aa17.29■□□□□ 0.36
LIG1-215ENST00000597901 FTOQ9C0B1 505 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIG1-215ENST00000597901 MSRAQ9UJ68 235 aa17.29■□□□□ 0.36
LIG1-215ENST00000597901 SCN10AQ9Y5Y9 1956 aa17.29■□□□□ 0.36
LIG1-215ENST00000597901 ZBBXA8MT70 800 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 STXBP3O00186 592 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 MAFGO15525 162 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 LGALS2P05162 132 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 CKBP12277 381 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 ACTN1P12814 892 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 SELPP16109 830 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 METAP2P50579 478 aaKnown RBP eCLIP17.28■□□□□ 0.36
LIG1-215ENST00000597901 TEX2Q8IWB9 1127 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 MYLIPQ8WY64 445 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 CDHR1Q96JP9 859 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 AGXT2Q9BYV1 514 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 JADE2Q9NQC1 790 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 BARHL2Q9NY43 387 aa17.28■□□□□ 0.36
LIG1-215ENST00000597901 hCG_1984214I3L0E3 225 aa17.27■□□□□ 0.36
LIG1-215ENST00000597901 FOSP01100 380 aaPredicted RBP17.27■□□□□ 0.36
LIG1-215ENST00000597901 RBL2Q08999 1139 aa17.27■□□□□ 0.36
LIG1-215ENST00000597901 RAB30Q15771 203 aa17.27■□□□□ 0.36
LIG1-215ENST00000597901 TRIM71Q2Q1W2 868 aaKnown RBP17.27■□□□□ 0.36
LIG1-215ENST00000597901 UTP14CQ5TAP6 766 aaKnown RBP17.27■□□□□ 0.36
LIG1-215ENST00000597901 ERICH6BQ5W0A0 696 aa17.27■□□□□ 0.36
LIG1-215ENST00000597901 PPP1R18Q6NYC8 613 aa17.27■□□□□ 0.36
LIG1-215ENST00000597901 ZNF713Q8N859 430 aaPredicted RBP17.27■□□□□ 0.36
LIG1-215ENST00000597901 RNPEPQ9H4A4 650 aa17.27■□□□□ 0.36
LIG1-215ENST00000597901 KIAA1217Q5T5P2 1943 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 C17orf102A2RUQ5 167 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 FOSL2P15408 326 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 KCNA2P16389 499 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 ADCY7P51828 1080 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 RABGGTBP53611 331 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 SP4Q02446 784 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 MTMR1Q13613 665 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 PFKFB3Q16875 520 aaPredicted RBP17.26■□□□□ 0.35
LIG1-215ENST00000597901 LRRC8DQ7L1W4 858 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.26■□□□□ 0.35
LIG1-215ENST00000597901 WNT8BQ93098 351 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 EHMT1Q9H9B1 1298 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 ZSWIM6Q9HCJ5 1215 aa17.26■□□□□ 0.35
LIG1-215ENST00000597901 YBX2Q9Y2T7 364 aaKnown RBP17.26■□□□□ 0.35
LIG1-215ENST00000597901 GSTTP1A0A1W2PQM5 241 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 PRPF3O43395 683 aaKnown RBP17.25■□□□□ 0.35
LIG1-215ENST00000597901 PARNO95453 639 aaKnown RBP17.25■□□□□ 0.35
LIG1-215ENST00000597901 SMIM10L2AP0DMW4 78 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 SMIM10L2BP0DMW5 78 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 ATP2A2P16615 1042 aaKnown RBP17.25■□□□□ 0.35
LIG1-215ENST00000597901 EVCP57679 992 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 ZNF618Q5T7W0 954 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 TRAF7Q6Q0C0 670 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 RUFY3Q7L099 469 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 SERINC5Q86VE9 423 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 MAFAQ8NHW3 353 aaPredicted RBP17.25■□□□□ 0.35
LIG1-215ENST00000597901 CYP2W1Q8TAV3 490 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 PHOSPHO2Q8TCD6 241 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 SEPT1Q8WYJ6 367 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 ATP6V0A1Q93050 837 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 PGBD1Q96JS3 809 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 MXRA8Q9BRK3 442 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 GLT8D2Q9H1C3 349 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 NKX2-4Q9H2Z4 354 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 SETD4Q9NVD3 440 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 TMEM260Q9NX78 707 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 PKD2L1Q9P0L9 805 aa17.25■□□□□ 0.35
LIG1-215ENST00000597901 TREHO43280 583 aa17.24■□□□□ 0.35
LIG1-215ENST00000597901 NBNO60934 754 aa17.24■□□□□ 0.35
LIG1-215ENST00000597901 SCG2P13521 617 aa17.24■□□□□ 0.35
LIG1-215ENST00000597901 MYOGP15173 224 aa17.24■□□□□ 0.35
LIG1-215ENST00000597901 PDIA3P30101 505 aaKnown RBP17.24■□□□□ 0.35
LIG1-215ENST00000597901 HOXC8P31273 242 aa17.24■□□□□ 0.35
LIG1-215ENST00000597901 CLK2P49760 499 aaKnown RBP17.24■□□□□ 0.35
LIG1-215ENST00000597901 PKN1Q16512 942 aa17.24■□□□□ 0.35
LIG1-215ENST00000597901 SLC28A3Q9HAS3 691 aa17.24■□□□□ 0.35
LIG1-215ENST00000597901 KCNH7Q9NS40 1196 aa17.24■□□□□ 0.35
LIG1-215ENST00000597901 PCDHA11Q9Y5I1 949 aa17.24■□□□□ 0.35
LIG1-215ENST00000597901 CXCL10P02778 98 aa17.23■□□□□ 0.35
LIG1-215ENST00000597901 ARP10275 920 aa17.23■□□□□ 0.35
LIG1-215ENST00000597901 GNAT1P11488 350 aa17.23■□□□□ 0.35
LIG1-215ENST00000597901 TCF7P36402 384 aaPredicted RBP17.23■□□□□ 0.35
LIG1-215ENST00000597901 THPOP40225 353 aa17.23■□□□□ 0.35
LIG1-215ENST00000597901 NTRK3Q16288 839 aa17.23■□□□□ 0.35
LIG1-215ENST00000597901 TRIM50Q86XT4 487 aa17.23■□□□□ 0.35
LIG1-215ENST00000597901 PHKBQ93100 1093 aa17.23■□□□□ 0.35
LIG1-215ENST00000597901 ANO3Q9BYT9 981 aa17.23■□□□□ 0.35
LIG1-215ENST00000597901 TM6SF1Q9BZW5 370 aa17.23■□□□□ 0.35
LIG1-215ENST00000597901 ZNF215Q9UL58 517 aaPredicted RBP17.23■□□□□ 0.35
LIG1-215ENST00000597901 CYP46A1Q9Y6A2 500 aa17.23■□□□□ 0.35
LIG1-215ENST00000597901 RSPH10B2B2RC85 870 aa17.22■□□□□ 0.35
LIG1-215ENST00000597901 MEIS1O00470 390 aa17.22■□□□□ 0.35
LIG1-215ENST00000597901 BAIAP3O94812 1187 aa17.22■□□□□ 0.35
LIG1-215ENST00000597901 RSPH10BP0C881 870 aa17.22■□□□□ 0.35
LIG1-215ENST00000597901 CCT2P78371 535 aaKnown RBP17.22■□□□□ 0.35
LIG1-215ENST00000597901 AKAP17AQ02040 695 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms