RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 CRISPLD2Q9H0B8 497 aa25.04■■□□□ 1.6
CHMP2A-204ENST00000597848 UPF3AQ9H1J1 476 aaKnown RBP25.04■■□□□ 1.6
CHMP2A-204ENST00000597848 HTTP42858 3142 aa25.04■■□□□ 1.6
CHMP2A-204ENST00000597848 DDX39AO00148 427 aaKnown RBP25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 NEMFO60524 1076 aa25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 BAG4O95429 457 aaKnown RBP25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 IRX5P78411 483 aaPredicted RBP25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 BEX3Q00994 111 aa25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 LRRC41Q15345 812 aa25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 FSCN1Q16658 493 aaKnown RBP25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 METTL7BQ6UX53 244 aa25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 POTEDQ86YR6 584 aa25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 AFG1LQ8WV93 481 aa25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 GJA10Q969M2 543 aa25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 TBC1D22BQ9NU19 505 aa25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 PCDHB6Q9Y5E3 794 aa25.03■■□□□ 1.6
CHMP2A-204ENST00000597848 POTEFA5A3E0 1075 aa25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 MYADML2A6NDP7 307 aa25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 NOP56O00567 594 aaKnown RBP25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 ADAMTS4O75173 837 aa25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 FARP2O94887 1054 aaPredicted RBP25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 F13A1P00488 732 aa25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 CPT1AP50416 773 aa25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 CALCRLQ16602 461 aa25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 FAM173BQ6P4H8 233 aa25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 SLC5A5Q92911 643 aa25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 EMID1Q96A84 441 aaPredicted RBP25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 JPH1Q9HDC5 661 aaPredicted RBP25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 TCEAL9Q9UHQ7 104 aa25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 NFASCO94856 1347 aa25.02■■□□□ 1.6
CHMP2A-204ENST00000597848 ZEB2O60315 1214 aa25.01■■□□□ 1.59
CHMP2A-204ENST00000597848 GAS7O60861 476 aa25.01■■□□□ 1.59
CHMP2A-204ENST00000597848 ORC2Q13416 577 aaPredicted RBP25.01■■□□□ 1.59
CHMP2A-204ENST00000597848 LRCH2Q5VUJ6 765 aa25.01■■□□□ 1.59
CHMP2A-204ENST00000597848 ETNPPLQ8TBG4 499 aa25.01■■□□□ 1.59
CHMP2A-204ENST00000597848 FAM20AQ96MK3 541 aa25.01■■□□□ 1.59
CHMP2A-204ENST00000597848 KCNMB3Q9NPA1 279 aa25.01■■□□□ 1.59
CHMP2A-204ENST00000597848 SLC9A2Q9UBY0 812 aa25.01■■□□□ 1.59
CHMP2A-204ENST00000597848 KBTBD13C9JR72 458 aa25■■□□□ 1.59
CHMP2A-204ENST00000597848 TBX3O15119 743 aa25■■□□□ 1.59
CHMP2A-204ENST00000597848 DHX15O43143 795 aaKnown RBP25■■□□□ 1.59
CHMP2A-204ENST00000597848 BRD1O95696 1058 aa25■■□□□ 1.59
CHMP2A-204ENST00000597848 EN2P19622 333 aaPredicted RBP25■■□□□ 1.59
CHMP2A-204ENST00000597848 HSDL1Q3SXM5 330 aa25■■□□□ 1.59
CHMP2A-204ENST00000597848 PCSK9Q8NBP7 692 aaKnown RBP25■■□□□ 1.59
CHMP2A-204ENST00000597848 KLHDC9Q8NEP7 349 aa25■■□□□ 1.59
CHMP2A-204ENST00000597848 PPTC7Q8NI37 304 aa25■■□□□ 1.59
CHMP2A-204ENST00000597848 IPO9Q96P70 1041 aaKnown RBP25■■□□□ 1.59
CHMP2A-204ENST00000597848 RIT2Q99578 217 aa25■■□□□ 1.59
CHMP2A-204ENST00000597848 TEKT3Q9BXF9 490 aa25■■□□□ 1.59
CHMP2A-204ENST00000597848 A6NJR5 290 aa24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 CTAGE5O15320 804 aa24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 MYL3P08590 195 aa24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 CAPN2P17655 700 aa24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 SOX10P56693 466 aa24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 NKX3-2P78367 333 aa24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 KCNA10Q16322 511 aa24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 FOXD4L6Q3SYB3 417 aaPredicted RBP24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 FOXD4L3Q6VB84 417 aaPredicted RBP24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 SLFN12Q8IYM2 578 aa24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 HAS1Q92839 578 aa24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 TMEM60Q9H2L4 133 aa24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 ZDHHC9Q9Y397 364 aa24.99■■□□□ 1.59
CHMP2A-204ENST00000597848 MMP3P08254 477 aa24.98■■□□□ 1.59
CHMP2A-204ENST00000597848 CST5P28325 142 aaPredicted RBP24.98■■□□□ 1.59
CHMP2A-204ENST00000597848 TXKP42681 527 aa24.98■■□□□ 1.59
CHMP2A-204ENST00000597848 NUCB2P80303 420 aa24.98■■□□□ 1.59
CHMP2A-204ENST00000597848 PTGDRQ13258 359 aa24.98■■□□□ 1.59
CHMP2A-204ENST00000597848 GPR20Q99678 358 aa24.98■■□□□ 1.59
CHMP2A-204ENST00000597848 TELO2Q9Y4R8 837 aa24.98■■□□□ 1.59
CHMP2A-204ENST00000597848 DNM1LO00429 736 aa24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 CHMP2AO43633 222 aa24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 PSMD10O75832 226 aa24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 OR52Z1P0C646 297 aa24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 DDIT3P35638 169 aa24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 ACTR2P61160 394 aa24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 KRT76Q01546 638 aa24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 DGKDQ16760 1214 aa24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 ANKLE1Q8NAG6 615 aa24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 SEPT1Q8WYJ6 367 aa24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 ZNF396Q96N95 335 aaPredicted RBP24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 MTMR9Q96QG7 549 aa24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 TSEN34Q9BSV6 310 aaKnown RBP24.97■■□□□ 1.59
CHMP2A-204ENST00000597848 PPFIA4O75335 1185 aa24.96■■□□□ 1.59
CHMP2A-204ENST00000597848 CCNE2O96020 404 aa24.96■■□□□ 1.59
CHMP2A-204ENST00000597848 ASGR1P07306 291 aa24.96■■□□□ 1.59
CHMP2A-204ENST00000597848 CEBPZQ03701 1054 aaKnown RBP24.96■■□□□ 1.59
CHMP2A-204ENST00000597848 SF3A1Q15459 793 aaKnown RBP24.96■■□□□ 1.59
CHMP2A-204ENST00000597848 UTP14CQ5TAP6 766 aaKnown RBP24.96■■□□□ 1.59
CHMP2A-204ENST00000597848 VTI1AQ96AJ9 217 aa24.96■■□□□ 1.59
CHMP2A-204ENST00000597848 POLR3EQ9NVU0 708 aa24.96■■□□□ 1.59
CHMP2A-204ENST00000597848 PCDHA12Q9UN75 941 aa24.96■■□□□ 1.59
CHMP2A-204ENST00000597848 CEP131Q9UPN4 1083 aa24.96■■□□□ 1.59
CHMP2A-204ENST00000597848 SAMM50Q9Y512 469 aa24.96■■□□□ 1.59
CHMP2A-204ENST00000597848 ELP1O95163 1332 aa24.95■■□□□ 1.58
CHMP2A-204ENST00000597848 GSTTP1A0A1W2PQM5 241 aa24.95■■□□□ 1.58
CHMP2A-204ENST00000597848 KPNA6O60684 536 aa24.95■■□□□ 1.58
CHMP2A-204ENST00000597848 ACLYP53396 1101 aa24.95■■□□□ 1.58
CHMP2A-204ENST00000597848 CCSAPQ6IQ19 270 aaPredicted RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms