RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 RPS6KB1P23443 525 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 RFC2P35250 354 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 NAPAP54920 295 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 BFSP2Q13515 415 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 GRIN2CQ14957 1233 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 XRRA1Q6P2D8 792 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 BLOC1S2Q6QNY1 142 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 LRRC8DQ7L1W4 858 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 RPUSD2Q8IZ73 545 aaKnown RBP14.99□□□□□ -0.01
LIG1-212ENST00000596549 AFAP1L1Q8TED9 768 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 GPRASP2Q96D09 838 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 MTIF3Q9H2K0 278 aaKnown RBP14.99□□□□□ -0.01
LIG1-212ENST00000596549 PCDHA6Q9UN73 950 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 PCDHA8Q9Y5H6 950 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 UBIAD1Q9Y5Z9 338 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 LOXHD1Q8IVV2 1947 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 UNC80Q8N2C7 3258 aa14.99□□□□□ -0.01
LIG1-212ENST00000596549 SPDYE3A6NKU9 549 aa14.98□□□□□ -0.01
LIG1-212ENST00000596549 hCG_1984214I3L0E3 225 aa14.98□□□□□ -0.01
LIG1-212ENST00000596549 REC8O95072 547 aa14.98□□□□□ -0.01
LIG1-212ENST00000596549 CKBP12277 381 aa14.98□□□□□ -0.01
LIG1-212ENST00000596549 ADD1P35611 737 aaKnown RBP14.98□□□□□ -0.01
LIG1-212ENST00000596549 CLK2P49760 499 aaKnown RBP14.98□□□□□ -0.01
LIG1-212ENST00000596549 METAP2P50579 478 aaKnown RBP eCLIP14.98□□□□□ -0.01
LIG1-212ENST00000596549 NEDD9Q14511 834 aa14.98□□□□□ -0.01
LIG1-212ENST00000596549 TCTN1Q2MV58 587 aa14.98□□□□□ -0.01
LIG1-212ENST00000596549 FBXL16Q8N461 479 aa14.98□□□□□ -0.01
LIG1-212ENST00000596549 CCDC155Q8N6L0 562 aa14.98□□□□□ -0.01
LIG1-212ENST00000596549 ZNF713Q8N859 430 aaPredicted RBP14.98□□□□□ -0.01
LIG1-212ENST00000596549 SENP7Q9BQF6 1050 aa14.98□□□□□ -0.01
LIG1-212ENST00000596549 ZNF576Q9H609 170 aa14.98□□□□□ -0.01
LIG1-212ENST00000596549 BARHL2Q9NY43 387 aa14.98□□□□□ -0.01
LIG1-212ENST00000596549 ZBBXA8MT70 800 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 H3BRB1 525 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 NOP56O00567 594 aaKnown RBP14.97□□□□□ -0.01
LIG1-212ENST00000596549 ADAMTS3O15072 1205 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 NBNO60934 754 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 SELPP16109 830 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 RABGGTBP53611 331 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 SP4Q02446 784 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 PTK7Q13308 1070 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 MBTPS1Q14703 1052 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 NLRX1Q86UT6 975 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 RETREG2Q8NC44 543 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 ANO3Q9BYT9 981 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 NKX2-4Q9H2Z4 354 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 TUT1Q9H6E5 874 aaKnown RBP14.97□□□□□ -0.01
LIG1-212ENST00000596549 RIC8AQ9NPQ8 531 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 TMEM260Q9NX78 707 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 CHD7Q9P2D1 2997 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 NAP1L2Q9ULW6 460 aaPredicted RBP14.97□□□□□ -0.01
LIG1-212ENST00000596549 SLC4A7Q9Y6M7 1214 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 V9GY48 417 aaPredicted RBP14.97□□□□□ -0.01
LIG1-212ENST00000596549 NLRC5Q86WI3 1866 aa14.97□□□□□ -0.01
LIG1-212ENST00000596549 SMIM10L2AP0DMW4 78 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 SMIM10L2BP0DMW5 78 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 MYOGP15173 224 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 FOSL2P15408 326 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 ADCY7P51828 1080 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 FGD1P98174 961 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 MTMR1Q13613 665 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 RAB30Q15771 203 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 PKN1Q16512 942 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 PFKFB3Q16875 520 aaPredicted RBP14.96□□□□□ -0.01
LIG1-212ENST00000596549 SERINC5Q86VE9 423 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 JADE2Q9NQC1 790 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 PKD2L1Q9P0L9 805 aa14.96□□□□□ -0.01
LIG1-212ENST00000596549 PRUNE2Q8WUY3 3088 aa14.95□□□□□ -0.02
LIG1-212ENST00000596549 C17orf102A2RUQ5 167 aa14.95□□□□□ -0.02
LIG1-212ENST00000596549 TREHO43280 583 aa14.95□□□□□ -0.02
LIG1-212ENST00000596549 EPB41L2O43491 1005 aaKnown RBP14.95□□□□□ -0.02
LIG1-212ENST00000596549 CXCL10P02778 98 aa14.95□□□□□ -0.02
LIG1-212ENST00000596549 SCG2P13521 617 aa14.95□□□□□ -0.02
LIG1-212ENST00000596549 ATP2A2P16615 1042 aaKnown RBP14.95□□□□□ -0.02
LIG1-212ENST00000596549 TCF7P36402 384 aaPredicted RBP14.95□□□□□ -0.02
LIG1-212ENST00000596549 TOB2Q14106 344 aaPredicted RBP14.95□□□□□ -0.02
LIG1-212ENST00000596549 NTRK3Q16288 839 aa14.95□□□□□ -0.02
LIG1-212ENST00000596549 ZNF618Q5T7W0 954 aa14.95□□□□□ -0.02
LIG1-212ENST00000596549 SLC17A8Q8NDX2 589 aa14.95□□□□□ -0.02
LIG1-212ENST00000596549 MAFAQ8NHW3 353 aaPredicted RBP14.95□□□□□ -0.02
LIG1-212ENST00000596549 CYP2W1Q8TAV3 490 aa14.95□□□□□ -0.02
LIG1-212ENST00000596549 USP26Q9BXU7 913 aa14.95□□□□□ -0.02
LIG1-212ENST00000596549 RNPEPQ9H4A4 650 aa14.95□□□□□ -0.02
LIG1-212ENST00000596549 ATG2AQ2TAZ0 1938 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 GSTTP1A0A1W2PQM5 241 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 SMCO2A6NFE2 343 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 PPFIA3O75145 1194 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 ACTN1P12814 892 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 SREBF1P36956 1147 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 EVCP57679 992 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 ADAM17P78536 824 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 AP3B2Q13367 1082 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 UTP14CQ5TAP6 766 aaKnown RBP14.94□□□□□ -0.02
LIG1-212ENST00000596549 LMBR1Q8WVP7 490 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 CRYGNQ8WXF5 182 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 PHKBQ93100 1093 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 CDHR1Q96JP9 859 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 SLC9A7Q96T83 725 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 MXRA8Q9BRK3 442 aa14.94□□□□□ -0.02
LIG1-212ENST00000596549 FTOQ9C0B1 505 aaKnown RBP eCLIP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms