RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CHMLP26374 656 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 SEMA3FQ13275 785 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 PIBF1Q8WXW3 757 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 ATP6V0A1Q93050 837 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 OSBPL7Q9BZF2 842 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 TUT1Q9H6E5 874 aaKnown RBP18.93■□□□□ 0.62
LIG1-205ENST00000593425 LMCD1Q9NZU5 365 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 TELO2Q9Y4R8 837 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 EMSYQ7Z589 1322 aa18.93■□□□□ 0.62
LIG1-205ENST00000593425 ERICH2A1L162 156 aa18.92■□□□□ 0.62
LIG1-205ENST00000593425 ANTXR2P58335 489 aa18.92■□□□□ 0.62
LIG1-205ENST00000593425 TRAF1Q13077 416 aa18.92■□□□□ 0.62
LIG1-205ENST00000593425 PLEKHG4Q58EX7 1191 aa18.92■□□□□ 0.62
LIG1-205ENST00000593425 RALYLQ86SE5 291 aaKnown RBP18.92■□□□□ 0.62
LIG1-205ENST00000593425 MYOCDQ8IZQ8 938 aa18.92■□□□□ 0.62
LIG1-205ENST00000593425 NCOA7Q8NI08 942 aa18.92■□□□□ 0.62
LIG1-205ENST00000593425 INPP4AQ96PE3 977 aaPredicted RBP18.92■□□□□ 0.62
LIG1-205ENST00000593425 C17orf80Q9BSJ5 609 aa18.92■□□□□ 0.62
LIG1-205ENST00000593425 RNPEPQ9H4A4 650 aa18.92■□□□□ 0.62
LIG1-205ENST00000593425 NLRC5Q86WI3 1866 aa18.91■□□□□ 0.62
LIG1-205ENST00000593425 ICAM3P32942 547 aa18.91■□□□□ 0.62
LIG1-205ENST00000593425 GNPTABQ3T906 1256 aa18.91■□□□□ 0.62
LIG1-205ENST00000593425 CYFIP1Q7L576 1253 aa18.91■□□□□ 0.62
LIG1-205ENST00000593425 TRIM50Q86XT4 487 aa18.91■□□□□ 0.62
LIG1-205ENST00000593425 RUFY2Q8WXA3 655 aa18.91■□□□□ 0.62
LIG1-205ENST00000593425 RTEL1Q9NZ71 1219 aa18.91■□□□□ 0.62
LIG1-205ENST00000593425 SPATA31C2B4DYI2 1134 aa18.9■□□□□ 0.62
LIG1-205ENST00000593425 NOP56O00567 594 aaKnown RBP18.9■□□□□ 0.62
LIG1-205ENST00000593425 AMHP03971 560 aa18.9■□□□□ 0.62
LIG1-205ENST00000593425 CTSHP09668 335 aa18.9■□□□□ 0.62
LIG1-205ENST00000593425 HTRA4P83105 476 aaPredicted RBP18.9■□□□□ 0.62
LIG1-205ENST00000593425 METTL7BQ6UX53 244 aa18.9■□□□□ 0.62
LIG1-205ENST00000593425 MB21D2Q8IYB1 491 aaPredicted RBP18.9■□□□□ 0.62
LIG1-205ENST00000593425 SP7Q8TDD2 431 aaPredicted RBP18.9■□□□□ 0.62
LIG1-205ENST00000593425 GPR20Q99678 358 aa18.9■□□□□ 0.62
LIG1-205ENST00000593425 MYL10Q9BUA6 226 aa18.9■□□□□ 0.62
LIG1-205ENST00000593425 EPHX3Q9H6B9 360 aa18.9■□□□□ 0.62
LIG1-205ENST00000593425 INSL6Q9Y581 213 aa18.9■□□□□ 0.62
LIG1-205ENST00000593425 SGSM2O43147 1006 aa18.89■□□□□ 0.61
LIG1-205ENST00000593425 FIBPO43427 364 aa18.89■□□□□ 0.61
LIG1-205ENST00000593425 STAM2O75886 525 aa18.89■□□□□ 0.61
LIG1-205ENST00000593425 NEDD9Q14511 834 aa18.89■□□□□ 0.61
LIG1-205ENST00000593425 SART3Q15020 963 aaKnown RBP18.89■□□□□ 0.61
LIG1-205ENST00000593425 USP17L6PQ6QN14 398 aa18.89■□□□□ 0.61
LIG1-205ENST00000593425 CATIPQ7Z7H3 387 aa18.89■□□□□ 0.61
LIG1-205ENST00000593425 FBXO22Q8NEZ5 403 aa18.89■□□□□ 0.61
LIG1-205ENST00000593425 IGDCC4Q8TDY8 1250 aa18.89■□□□□ 0.61
LIG1-205ENST00000593425 KHSRPQ92945 711 aaKnown RBP eCLIP18.89■□□□□ 0.61
LIG1-205ENST00000593425 C1QTNF1Q9BXJ1 281 aa18.89■□□□□ 0.61
LIG1-205ENST00000593425 SETD4Q9NVD3 440 aa18.89■□□□□ 0.61
LIG1-205ENST00000593425 COL4A6Q14031 1691 aa18.89■□□□□ 0.61
LIG1-205ENST00000593425 USP26Q9BXU7 913 aa18.88■□□□□ 0.61
LIG1-205ENST00000593425 UBE2ZQ9H832 354 aaPredicted RBP18.88■□□□□ 0.61
LIG1-205ENST00000593425 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.87■□□□□ 0.61
LIG1-205ENST00000593425 NCOR1O75376 2440 aa18.87■□□□□ 0.61
LIG1-205ENST00000593425 ADAM17P78536 824 aa18.87■□□□□ 0.61
LIG1-205ENST00000593425 SP4Q02446 784 aa18.87■□□□□ 0.61
LIG1-205ENST00000593425 RALGAPA2Q2PPJ7 1873 aa18.87■□□□□ 0.61
LIG1-205ENST00000593425 ATG2AQ2TAZ0 1938 aa18.87■□□□□ 0.61
LIG1-205ENST00000593425 UTP14CQ5TAP6 766 aaKnown RBP18.87■□□□□ 0.61
LIG1-205ENST00000593425 ZNF654Q8IZM8 581 aa18.87■□□□□ 0.61
LIG1-205ENST00000593425 SMARCC2Q8TAQ2 1214 aa18.87■□□□□ 0.61
LIG1-205ENST00000593425 LMBR1Q8WVP7 490 aa18.87■□□□□ 0.61
LIG1-205ENST00000593425 SEPT8Q92599 483 aa18.87■□□□□ 0.61
LIG1-205ENST00000593425 SPZ1Q9BXG8 430 aa18.87■□□□□ 0.61
LIG1-205ENST00000593425 LY9Q9HBG7 655 aa18.87■□□□□ 0.61
LIG1-205ENST00000593425 SUPT16HQ9Y5B9 1047 aaKnown RBP18.87■□□□□ 0.61
LIG1-205ENST00000593425 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.86■□□□□ 0.61
LIG1-205ENST00000593425 MEIS2O14770 477 aa18.86■□□□□ 0.61
LIG1-205ENST00000593425 CAND2O75155 1236 aa18.86■□□□□ 0.61
LIG1-205ENST00000593425 PCNX4Q63HM2 1172 aa18.86■□□□□ 0.61
LIG1-205ENST00000593425 MAP4K1Q92918 833 aa18.86■□□□□ 0.61
LIG1-205ENST00000593425 TOP1MTQ969P6 601 aa18.86■□□□□ 0.61
LIG1-205ENST00000593425 CD320Q9NPF0 282 aa18.86■□□□□ 0.61
LIG1-205ENST00000593425 RBM8AQ9Y5S9 174 aaKnown RBP18.86■□□□□ 0.61
LIG1-205ENST00000593425 PIK3CDO00329 1044 aa18.85■□□□□ 0.61
LIG1-205ENST00000593425 DDAH1O94760 285 aa18.85■□□□□ 0.61
LIG1-205ENST00000593425 UPP2O95045 317 aa18.85■□□□□ 0.61
LIG1-205ENST00000593425 PLEKHA8P1O95397 391 aa18.85■□□□□ 0.61
LIG1-205ENST00000593425 ARHGAP4P98171 946 aa18.85■□□□□ 0.61
LIG1-205ENST00000593425 COL9A3Q14050 684 aaPredicted RBP18.85■□□□□ 0.61
LIG1-205ENST00000593425 EPC2Q52LR7 807 aa18.85■□□□□ 0.61
LIG1-205ENST00000593425 CTCFLQ8NI51 663 aaPredicted RBP18.85■□□□□ 0.61
LIG1-205ENST00000593425 CUL5Q93034 780 aa18.85■□□□□ 0.61
LIG1-205ENST00000593425 RRP36Q96EU6 259 aaKnown RBP18.85■□□□□ 0.61
LIG1-205ENST00000593425 YME1L1Q96TA2 773 aa18.85■□□□□ 0.61
LIG1-205ENST00000593425 MAP3K14Q99558 947 aa18.85■□□□□ 0.61
LIG1-205ENST00000593425 LRFN3Q9BTN0 628 aa18.85■□□□□ 0.61
LIG1-205ENST00000593425 ZNF215Q9UL58 517 aaPredicted RBP18.85■□□□□ 0.61
LIG1-205ENST00000593425 BDP1A6H8Y1 2624 aa18.84■□□□□ 0.61
LIG1-205ENST00000593425 GNAT1P11488 350 aa18.84■□□□□ 0.61
LIG1-205ENST00000593425 FAM26DQ5JW98 314 aa18.84■□□□□ 0.61
LIG1-205ENST00000593425 CMTR1Q8N1G2 835 aaKnown RBP18.84■□□□□ 0.61
LIG1-205ENST00000593425 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.84■□□□□ 0.61
LIG1-205ENST00000593425 MRPL38Q96DV4 380 aaKnown RBP18.84■□□□□ 0.61
LIG1-205ENST00000593425 SENP7Q9BQF6 1050 aa18.84■□□□□ 0.61
LIG1-205ENST00000593425 KAT6AQ92794 2004 aa18.84■□□□□ 0.61
LIG1-205ENST00000593425 BRWD1Q9NSI6 2320 aa18.83■□□□□ 0.61
LIG1-205ENST00000593425 ATP9AO75110 1047 aa18.83■□□□□ 0.6
LIG1-205ENST00000593425 RXRAP19793 462 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms