RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 ARHGEF15O94989 841 aa20.65■□□□□ 0.9
CIRBP-243ENST00000593128 PARNO95453 639 aaKnown RBP20.65■□□□□ 0.9
CIRBP-243ENST00000593128 SMIM10L2AP0DMW4 78 aa20.65■□□□□ 0.9
CIRBP-243ENST00000593128 SMIM10L2BP0DMW5 78 aa20.65■□□□□ 0.9
CIRBP-243ENST00000593128 CALM1P0DP23 149 aa20.65■□□□□ 0.9
CIRBP-243ENST00000593128 CALM2P0DP24 149 aa20.65■□□□□ 0.9
CIRBP-243ENST00000593128 CALM3P0DP25 149 aa20.65■□□□□ 0.9
CIRBP-243ENST00000593128 HOXD8P13378 290 aaPredicted RBP20.65■□□□□ 0.9
CIRBP-243ENST00000593128 TAP1Q03518 808 aa20.65■□□□□ 0.9
CIRBP-243ENST00000593128 TCTN1Q2MV58 587 aa20.65■□□□□ 0.9
CIRBP-243ENST00000593128 MICU3Q86XE3 530 aa20.65■□□□□ 0.9
CIRBP-243ENST00000593128 FRMPD4Q14CM0 1322 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 EPOPA6NHQ4 379 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 SPATA31C2B4DYI2 1134 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 RBL2Q08999 1139 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 SEMA3FQ13275 785 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 IKBKEQ14164 716 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 UBE2SQ16763 222 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 TRIM71Q2Q1W2 868 aaKnown RBP20.64■□□□□ 0.89
CIRBP-243ENST00000593128 METTL7BQ6UX53 244 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 HEATR3Q7Z4Q2 680 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 NLRX1Q86UT6 975 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 TRIM50Q86XT4 487 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 INPP4AQ96PE3 977 aaPredicted RBP20.64■□□□□ 0.89
CIRBP-243ENST00000593128 PSTPIP2Q9H939 334 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 PKD2L1Q9P0L9 805 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 MTUS1Q9ULD2 1270 aa20.64■□□□□ 0.89
CIRBP-243ENST00000593128 LCHNA4D1U4 455 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 RSPH10B2B2RC85 870 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 MEIS2O14770 477 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 TREHO43280 583 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 CXCL10P02778 98 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 CTSHP09668 335 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 RSPH10BP0C881 870 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 ICAM3P32942 547 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 PCNX4Q63HM2 1172 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 KRT40Q6A162 431 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 SYNE3Q6ZMZ3 975 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 SPRED2Q7Z698 418 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 ATXN2LQ8WWM7 1075 aaKnown RBP20.63■□□□□ 0.89
CIRBP-243ENST00000593128 GPR20Q99678 358 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 MTA3Q9BTC8 594 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 TELO2Q9Y4R8 837 aa20.63■□□□□ 0.89
CIRBP-243ENST00000593128 COL4A4P53420 1690 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-243ENST00000593128 ABHD14A-ACY1A0A1B0GW23 586 aa20.62■□□□□ 0.89
CIRBP-243ENST00000593128 SMARCA1P28370 1054 aa20.62■□□□□ 0.89
CIRBP-243ENST00000593128 LIFRP42702 1097 aa20.62■□□□□ 0.89
CIRBP-243ENST00000593128 MRPS5P82675 430 aaKnown RBP20.62■□□□□ 0.89
CIRBP-243ENST00000593128 MBTPS1Q14703 1052 aa20.62■□□□□ 0.89
CIRBP-243ENST00000593128 NECTIN1Q15223 517 aa20.62■□□□□ 0.89
CIRBP-243ENST00000593128 RNF20Q5VTR2 975 aa20.62■□□□□ 0.89
CIRBP-243ENST00000593128 SERINC5Q86VE9 423 aa20.62■□□□□ 0.89
CIRBP-243ENST00000593128 TCEANC2Q96MN5 208 aa20.62■□□□□ 0.89
CIRBP-243ENST00000593128 ASB2Q96Q27 587 aa20.62■□□□□ 0.89
CIRBP-243ENST00000593128 USP26Q9BXU7 913 aa20.62■□□□□ 0.89
CIRBP-243ENST00000593128 SETD4Q9NVD3 440 aa20.62■□□□□ 0.89
CIRBP-243ENST00000593128 ZNF215Q9UL58 517 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-243ENST00000593128 REV3LO60673 3130 aa20.61■□□□□ 0.89
CIRBP-243ENST00000593128 SPDYE3A6NKU9 549 aa20.61■□□□□ 0.89
CIRBP-243ENST00000593128 PIK3CDO00329 1044 aa20.61■□□□□ 0.89
CIRBP-243ENST00000593128 LGR5O75473 907 aa20.61■□□□□ 0.89
CIRBP-243ENST00000593128 ARHGAP4P98171 946 aa20.61■□□□□ 0.89
CIRBP-243ENST00000593128 TRAF7Q6Q0C0 670 aa20.61■□□□□ 0.89
CIRBP-243ENST00000593128 FANCBQ8NB91 859 aa20.61■□□□□ 0.89
CIRBP-243ENST00000593128 RNPEPQ9H4A4 650 aa20.61■□□□□ 0.89
CIRBP-243ENST00000593128 NAP1L2Q9ULW6 460 aaPredicted RBP20.61■□□□□ 0.89
CIRBP-243ENST00000593128 MTCH2Q9Y6C9 303 aa20.61■□□□□ 0.89
CIRBP-243ENST00000593128 SPTBN5Q9NRC6 3674 aaKnown RBP20.61■□□□□ 0.89
CIRBP-243ENST00000593128 EMSYQ7Z589 1322 aa20.6■□□□□ 0.89
CIRBP-243ENST00000593128 GNAT1P11488 350 aa20.6■□□□□ 0.89
CIRBP-243ENST00000593128 XRRA1Q6P2D8 792 aa20.6■□□□□ 0.89
CIRBP-243ENST00000593128 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.6■□□□□ 0.892e-8■□□□□ 8.6
CIRBP-243ENST00000593128 TMTC3Q6ZXV5 915 aa20.6■□□□□ 0.89
CIRBP-243ENST00000593128 CENPQQ7L2Z9 268 aaPredicted RBP20.6■□□□□ 0.89
CIRBP-243ENST00000593128 DBF4BQ8NFT6 615 aa20.6■□□□□ 0.89
CIRBP-243ENST00000593128 GDPD5Q8WTR4 605 aa20.6■□□□□ 0.89
CIRBP-243ENST00000593128 EFCAB14O75071 495 aa20.59■□□□□ 0.89
CIRBP-243ENST00000593128 TFF2Q03403 129 aa20.59■□□□□ 0.89
CIRBP-243ENST00000593128 BMP2KLQ5H9B9 411 aa20.59■□□□□ 0.89
CIRBP-243ENST00000593128 MYOCDQ8IZQ8 938 aa20.59■□□□□ 0.89
CIRBP-243ENST00000593128 ADAMTS19Q8TE59 1207 aa20.59■□□□□ 0.89
CIRBP-243ENST00000593128 NEK1Q96PY6 1258 aa20.59■□□□□ 0.89
CIRBP-243ENST00000593128 TNFRSF10AO00220 468 aa20.58■□□□□ 0.89
CIRBP-243ENST00000593128 ATP9AO75110 1047 aa20.58■□□□□ 0.89
CIRBP-243ENST00000593128 GJB5O95377 273 aa20.58■□□□□ 0.89
CIRBP-243ENST00000593128 AMHP03971 560 aa20.58■□□□□ 0.89
CIRBP-243ENST00000593128 MARK3P27448 753 aa20.58■□□□□ 0.89
CIRBP-243ENST00000593128 TCF7P36402 384 aaPredicted RBP20.58■□□□□ 0.89
CIRBP-243ENST00000593128 GRB10Q13322 594 aa20.58■□□□□ 0.89
CIRBP-243ENST00000593128 MTMR1Q13613 665 aa20.58■□□□□ 0.89
CIRBP-243ENST00000593128 GIMAP8Q8ND71 665 aaPredicted RBP20.58■□□□□ 0.89
CIRBP-243ENST00000593128 RAD9AQ99638 391 aa20.58■□□□□ 0.89
CIRBP-243ENST00000593128 PCDHA6Q9UN73 950 aa20.58■□□□□ 0.89
CIRBP-243ENST00000593128 PCDHA8Q9Y5H6 950 aa20.58■□□□□ 0.89
CIRBP-243ENST00000593128 KAT6AQ92794 2004 aa20.58■□□□□ 0.88
CIRBP-243ENST00000593128 TCF20Q9UGU0 1960 aaKnown RBP20.57■□□□□ 0.88
CIRBP-243ENST00000593128 ITGB5P18084 799 aa20.57■□□□□ 0.88
CIRBP-243ENST00000593128 NAPAP54920 295 aa20.57■□□□□ 0.88
CIRBP-243ENST00000593128 MICAL3Q7RTP6 2002 aa20.57■□□□□ 0.88
CIRBP-243ENST00000593128 LMBR1Q8WVP7 490 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms