RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 RNPEPQ9H4A4 650 aa13.01□□□□□ -0.33
PRKCSH-220ENST00000593104 MYO7AQ13402 2215 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 H3BRB1 525 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 PPFIA4O75335 1185 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 PARNO95453 639 aaKnown RBP13□□□□□ -0.33
PRKCSH-220ENST00000593104 SSTR3P32745 418 aaPredicted RBP13□□□□□ -0.33
PRKCSH-220ENST00000593104 HTRA4P83105 476 aaPredicted RBP13□□□□□ -0.33
PRKCSH-220ENST00000593104 GHRHRQ02643 423 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 PTH1RQ03431 593 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 GRM4Q14833 912 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 EPC2Q52LR7 807 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 PLEKHG4Q58EX7 1191 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 UTP14CQ5TAP6 766 aaKnown RBP13□□□□□ -0.33
PRKCSH-220ENST00000593104 PTCRAQ6ISU1 281 aaPredicted RBP13□□□□□ -0.33
PRKCSH-220ENST00000593104 CYFIP1Q7L576 1253 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 FAM178BQ8IXR5 827 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 ZBTB10Q96DT7 871 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 OSBPL3Q9H4L5 887 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 TUT1Q9H6E5 874 aaKnown RBP13□□□□□ -0.33
PRKCSH-220ENST00000593104 LMCD1Q9NZU5 365 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 INSL6Q9Y581 213 aa13□□□□□ -0.33
PRKCSH-220ENST00000593104 PI4K2BG5E9Z4 385 aa12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 GCOM1H8Y6P7 765 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 POLR2MP0CAP2 368 aa12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 GSPT1P15170 499 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 PDE4AP27815 886 aa12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 CCND2P30279 289 aa12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 GPM6BQ13491 265 aa12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 LEXMQ3ZCV2 418 aa12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 RUFY4Q6ZNE9 571 aa12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 GJD3Q8N144 294 aa12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 SP7Q8TDD2 431 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 YME1L1Q96TA2 773 aa12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 MYL10Q9BUA6 226 aa12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 HCN4Q9Y3Q4 1203 aa12.99□□□□□ -0.33
PRKCSH-220ENST00000593104 NOP56O00567 594 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 IFIT3O14879 490 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 CYP21A2P08686 494 aa12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 HOXC8P31273 242 aa12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 COL9A3Q14050 684 aaPredicted RBP12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 CLUL1Q15846 466 aa12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 USP17L6PQ6QN14 398 aa12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 MRPL38Q96DV4 380 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 YTHDC1Q96MU7 727 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 UIMC1Q96RL1 719 aa12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 GPR20Q99678 358 aa12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 RWDD1Q9H446 243 aaPredicted RBP12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 PKD2L1Q9P0L9 805 aa12.98□□□□□ -0.33
PRKCSH-220ENST00000593104 EMSYQ7Z589 1322 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 GPR37L1O60883 481 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 EFCAB14O75071 495 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 GHRP10912 638 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 GTF2F1P35269 517 aaKnown RBP eCLIP12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 ANTXR2P58335 489 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 ARHGAP4P98171 946 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 TICAM2Q86XR7 235 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 RAB11FIP4Q86YS3 637 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 TMEM192Q8IY95 271 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 CMTR1Q8N1G2 835 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 BANK1Q8NDB2 785 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 LMBR1Q8WVP7 490 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 SEPT8Q92599 483 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 TOP1MTQ969P6 601 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 IFIH1Q9BYX4 1025 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 MAF1Q9H063 256 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 CNNM2Q9H8M5 875 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 CTNNA3Q9UI47 895 aa12.97□□□□□ -0.33
PRKCSH-220ENST00000593104 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
PRKCSH-220ENST00000593104 H3BNC9 293 aa12.96□□□□□ -0.33
PRKCSH-220ENST00000593104 CHRNA1P02708 482 aa12.96□□□□□ -0.33
PRKCSH-220ENST00000593104 LINC00271P0C7V0 271 aa12.96□□□□□ -0.33
PRKCSH-220ENST00000593104 MARK3P27448 753 aa12.96□□□□□ -0.33
PRKCSH-220ENST00000593104 DLX2Q07687 328 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-220ENST00000593104 TROAPQ12815 778 aa12.96□□□□□ -0.33
PRKCSH-220ENST00000593104 KCNV1Q6PIU1 500 aa12.96□□□□□ -0.33
PRKCSH-220ENST00000593104 NEK9Q8TD19 979 aa12.96□□□□□ -0.33
PRKCSH-220ENST00000593104 INPP4AQ96PE3 977 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-220ENST00000593104 CLDND1Q9NY35 253 aa12.96□□□□□ -0.33
PRKCSH-220ENST00000593104 KAT6AQ92794 2004 aa12.96□□□□□ -0.34
PRKCSH-220ENST00000593104 COL4A6Q14031 1691 aa12.96□□□□□ -0.34
PRKCSH-220ENST00000593104 RALGAPA2Q2PPJ7 1873 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 FRMPD4Q14CM0 1322 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 PNMA6FA0A0J9YX94 578 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 hCG_1642624A0A1W2PR95 340 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 SPATA31C2B4DYI2 1134 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 HIP1O00291 1037 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 GRM6O15303 877 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 ATP9AO75110 1047 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 TGFB3P10600 412 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 RXRAP19793 462 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 CTNNB1P35222 781 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 ADAM17P78536 824 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 WTAPQ15007 396 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 METTL7BQ6UX53 244 aa12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 ALYREFQ86V81 257 aaKnown RBP12.95□□□□□ -0.34
PRKCSH-220ENST00000593104 KIAA1671Q9BY89 1806 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms