RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PCDHA6Q9UN73 950 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 PCDHA8Q9Y5H6 950 aa13.53□□□□□ -0.24
DDX39A-219ENST00000592927 TCF20Q9UGU0 1960 aaKnown RBP13.52□□□□□ -0.24
DDX39A-219ENST00000592927 MUC6Q6W4X9 2439 aa13.52□□□□□ -0.24
DDX39A-219ENST00000592927 TLL1O43897 1013 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 CLK2P49760 499 aaKnown RBP13.52□□□□□ -0.25
DDX39A-219ENST00000592927 PDE4DQ08499 809 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 AP3B2Q13367 1082 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 TMEM240Q5SV17 173 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 JAKMIP3Q5VZ66 844 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 C16orf59Q7L2K0 433 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 ARMCX2Q7L311 632 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 DAGLBQ8NCG7 672 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 IWS1Q96ST2 819 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 SCAND2PQ9GZW5 306 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-219ENST00000592927 NKX2-4Q9H2Z4 354 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 TMEM260Q9NX78 707 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 CNPY2Q9Y2B0 182 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 ASTN1O14525 1302 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 FRMPD3Q5JV73 1810 aa13.52□□□□□ -0.25
DDX39A-219ENST00000592927 PI4K2BG5E9Z4 385 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 SEPT4O43236 478 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 IGHA2P01877 340 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 KRT2P35908 639 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 NHLH1Q02575 133 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 DNM1Q05193 864 aaKnown RBP13.51□□□□□ -0.25
DDX39A-219ENST00000592927 FAAP100Q0VG06 881 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 RASIP1Q5U651 963 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 DIS3L2Q8IYB7 885 aaKnown RBP13.51□□□□□ -0.25
DDX39A-219ENST00000592927 RASGRP4Q8TDF6 673 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 MORC4Q8TE76 937 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 HERVK_113Q902F9 699 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 PDCD2LQ9BRP1 358 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 ANO3Q9BYT9 981 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 SLC28A3Q9HAS3 691 aa13.51□□□□□ -0.25
DDX39A-219ENST00000592927 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.51□□□□□ -0.25
DDX39A-219ENST00000592927 CHD9Q3L8U1 2897 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 ELP1O95163 1332 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 ADAMTS3O15072 1205 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 SNAI1O95863 264 aaPredicted RBP13.5□□□□□ -0.25
DDX39A-219ENST00000592927 TIMP1P01033 207 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 NR3C2P08235 984 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 MYCLP12524 364 aaPredicted RBP13.5□□□□□ -0.25
DDX39A-219ENST00000592927 NCLP19338 710 aaKnown RBP13.5□□□□□ -0.25
DDX39A-219ENST00000592927 EDNRBP24530 442 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 CCND2P30279 289 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 PGM5Q15124 567 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 NPY5RQ15761 445 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 RAB30Q15771 203 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 STXBP2Q15833 593 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 PRAMEF19Q5SWL8 479 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 NOSTRINQ8IVI9 506 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 ABHD16BQ9H3Z7 469 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 LMBRD1Q9NUN5 540 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 PHF24Q9UPV7 400 aa13.5□□□□□ -0.25
DDX39A-219ENST00000592927 DDX49Q9Y6V7 483 aaKnown RBP13.5□□□□□ -0.25
DDX39A-219ENST00000592927 ZNFX1Q9P2E3 1918 aaKnown RBP13.49□□□□□ -0.25
DDX39A-219ENST00000592927 FRMPD4Q14CM0 1322 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 PRR33A8MZF0 331 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 KIF28PB7ZC32 967 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 EIF3JO75822 258 aaKnown RBP13.49□□□□□ -0.25
DDX39A-219ENST00000592927 ACVR2BQ13705 512 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 NBR1Q14596 966 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 FOXD4L6Q3SYB3 417 aaPredicted RBP13.49□□□□□ -0.25
DDX39A-219ENST00000592927 PCNX4Q63HM2 1172 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 MFSD5Q6N075 450 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 XRRA1Q6P2D8 792 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 FOXD4L3Q6VB84 417 aaPredicted RBP13.49□□□□□ -0.25
DDX39A-219ENST00000592927 EEPD1Q7L9B9 569 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 KRT25Q7Z3Z0 450 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 VSIG10LQ86VR7 867 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 OXER1Q8TDS5 423 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 UIMC1Q96RL1 719 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 VTA1Q9NP79 307 aa13.49□□□□□ -0.25
DDX39A-219ENST00000592927 ZHX1Q9UKY1 873 aaPredicted RBP13.49□□□□□ -0.25
DDX39A-219ENST00000592927 YBX2Q9Y2T7 364 aaKnown RBP13.49□□□□□ -0.25
DDX39A-219ENST00000592927 CCDC194A0A1B0GVG4 234 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 DCDC2CA8MYV0 355 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 BTBD18B2RXH4 712 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 M0R2N6 131 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 PRPF40AO75400 957 aaKnown RBP13.48□□□□□ -0.25
DDX39A-219ENST00000592927 STAM2O75886 525 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 MBD3O95983 291 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 ACRP10323 421 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 SREBF1P36956 1147 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 PPIGQ13427 754 aaKnown RBP eCLIP13.48□□□□□ -0.253e-7■■□□□ 12.7
DDX39A-219ENST00000592927 RILPL1Q5EBL4 403 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 FAM173BQ6P4H8 233 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 ZNF365Q70YC5 407 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 FBXO16Q8IX29 292 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-219ENST00000592927 IL31RAQ8NI17 732 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 ANP32EQ9BTT0 268 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 CD320Q9NPF0 282 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 POLR3EQ9NVU0 708 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 RTEL1Q9NZ71 1219 aa13.48□□□□□ -0.25
DDX39A-219ENST00000592927 PLXNA1Q9UIW2 1896 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 FIBPO43427 364 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms