RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	CYTH3	O43739	400 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	LGALS2	P05162	132 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	SMIM10L2A	P0DMW4	78 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	SMIM10L2B	P0DMW5	78 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	TGFB3	P10600	412 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	KCNA5	P22460	613 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	SEMA3F	Q13275	785 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	HOMER1	Q86YM7	354 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	FAM178B	Q8IXR5	827 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	SAMD3	Q8N6K7	520 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	ATP6V0A1	Q93050	837 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	RNPEP	Q9H4A4	650 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	TUT1	Q9H6E5	874 aa	Known RBP	21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	RIOX1	Q9H6W3	641 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	CTNNA3	Q9UI47	895 aa		21.22	■□□□□ 0.99
CIRBP-238	ENST00000592412	MUC6	Q6W4X9	2439 aa		21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	BAZ2B	Q9UIF8	2168 aa	Known RBP	21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	HIP1	O00291	1037 aa		21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	AMH	P03971	560 aa		21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	IL9	P15248	144 aa		21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	CCND2	P30279	289 aa		21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	MRPS9	P82933	396 aa	Known RBP	21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	GRM4	Q14833	912 aa		21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	EPC2	Q52LR7	807 aa		21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	RWDD1	Q9H446	243 aa	Predicted RBP	21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	FRMPD4	Q14CM0	1322 aa		21.21	■□□□□ 0.99
CIRBP-238	ENST00000592412	DOCK5	Q9H7D0	1870 aa		21.2	■□□□□ 0.98
CIRBP-238	ENST00000592412	GCOM1	H8Y6P7	765 aa	Predicted RBP	21.2	■□□□□ 0.98
CIRBP-238	ENST00000592412	CTSH	P09668	335 aa		21.2	■□□□□ 0.98
CIRBP-238	ENST00000592412	POLR2M	P0CAP2	368 aa		21.2	■□□□□ 0.98
CIRBP-238	ENST00000592412	FCHSD1	Q86WN1	690 aa		21.2	■□□□□ 0.98
CIRBP-238	ENST00000592412	TOP1MT	Q969P6	601 aa		21.2	■□□□□ 0.98
CIRBP-238	ENST00000592412	MRPL38	Q96DV4	380 aa	Known RBP	21.2	■□□□□ 0.98
CIRBP-238	ENST00000592412	INPP4A	Q96PE3	977 aa	Predicted RBP	21.2	■□□□□ 0.98
CIRBP-238	ENST00000592412	MLXIP	Q9HAP2	919 aa		21.2	■□□□□ 0.98
CIRBP-238	ENST00000592412	HCN4	Q9Y3Q4	1203 aa		21.2	■□□□□ 0.98
CIRBP-238	ENST00000592412	ADAM17	P78536	824 aa		21.19	■□□□□ 0.98
CIRBP-238	ENST00000592412	TRIM50	Q86XT4	487 aa		21.19	■□□□□ 0.98
CIRBP-238	ENST00000592412	NEK9	Q8TD19	979 aa		21.19	■□□□□ 0.98
CIRBP-238	ENST00000592412	TAF6L	Q9Y6J9	622 aa		21.19	■□□□□ 0.98
CIRBP-238	ENST00000592412	ICAM3	P32942	547 aa		21.18	■□□□□ 0.98
CIRBP-238	ENST00000592412	AAMP	Q13685	434 aa		21.18	■□□□□ 0.98
CIRBP-238	ENST00000592412	PTCRA	Q6ISU1	281 aa	Predicted RBP	21.18	■□□□□ 0.98
CIRBP-238	ENST00000592412	GJD3	Q8N144	294 aa		21.18	■□□□□ 0.98
CIRBP-238	ENST00000592412	GPR20	Q99678	358 aa		21.18	■□□□□ 0.98
CIRBP-238	ENST00000592412	SETD4	Q9NVD3	440 aa		21.18	■□□□□ 0.98
CIRBP-238	ENST00000592412	NLRC5	Q86WI3	1866 aa		21.18	■□□□□ 0.98
CIRBP-238	ENST00000592412	ATG2A	Q2TAZ0	1938 aa		21.17	■□□□□ 0.98
CIRBP-238	ENST00000592412	GRXCR2	A6NFK2	248 aa		21.17	■□□□□ 0.98
CIRBP-238	ENST00000592412	SPATA31C2	B4DYI2	1134 aa		21.17	■□□□□ 0.98
CIRBP-238	ENST00000592412		H3BNC9	293 aa		21.17	■□□□□ 0.98
CIRBP-238	ENST00000592412	CAND2	O75155	1236 aa		21.17	■□□□□ 0.98
CIRBP-238	ENST00000592412	TROAP	Q12815	778 aa		21.17	■□□□□ 0.98
CIRBP-238	ENST00000592412	COL19A1	Q14993	1142 aa		21.17	■□□□□ 0.98
CIRBP-238	ENST00000592412	METTL7B	Q6UX53	244 aa		21.17	■□□□□ 0.98
CIRBP-238	ENST00000592412	CYFIP1	Q7L576	1253 aa		21.17	■□□□□ 0.98
CIRBP-238	ENST00000592412	SEPT8	Q92599	483 aa		21.17	■□□□□ 0.98
CIRBP-238	ENST00000592412	SUPT16H	Q9Y5B9	1047 aa	Known RBP	21.17	■□□□□ 0.98
CIRBP-238	ENST00000592412	PNMA6F	A0A0J9YX94	578 aa		21.16	■□□□□ 0.98
CIRBP-238	ENST00000592412		H3BQ06	376 aa	Predicted RBP	21.16	■□□□□ 0.98
CIRBP-238	ENST00000592412	UPP2	O95045	317 aa		21.16	■□□□□ 0.98
CIRBP-238	ENST00000592412	CYP21A2	P08686	494 aa		21.16	■□□□□ 0.98
CIRBP-238	ENST00000592412	LINC00271	P0C7V0	271 aa		21.16	■□□□□ 0.98
CIRBP-238	ENST00000592412	SAMD11	Q96NU1	681 aa		21.16	■□□□□ 0.98
CIRBP-238	ENST00000592412	YME1L1	Q96TA2	773 aa		21.16	■□□□□ 0.98
CIRBP-238	ENST00000592412	USP26	Q9BXU7	913 aa		21.16	■□□□□ 0.98
CIRBP-238	ENST00000592412	RTEL1	Q9NZ71	1219 aa		21.16	■□□□□ 0.98
CIRBP-238	ENST00000592412	MYO7A	Q13402	2215 aa		21.16	■□□□□ 0.98
CIRBP-238	ENST00000592412	GSPT1	P15170	499 aa	Known RBP	21.15	■□□□□ 0.98
CIRBP-238	ENST00000592412	GPM6B	Q13491	265 aa		21.15	■□□□□ 0.98
CIRBP-238	ENST00000592412	TCEAL5	Q5H9L2	206 aa		21.15	■□□□□ 0.98
CIRBP-238	ENST00000592412	TMEM192	Q8IY95	271 aa		21.15	■□□□□ 0.98
CIRBP-238	ENST00000592412	BANK1	Q8NDB2	785 aa		21.15	■□□□□ 0.98
CIRBP-238	ENST00000592412	RALGAPA2	Q2PPJ7	1873 aa		21.14	■□□□□ 0.97
CIRBP-238	ENST00000592412	NOP56	O00567	594 aa	Known RBP	21.14	■□□□□ 0.97
CIRBP-238	ENST00000592412	PTH1R	Q03431	593 aa		21.14	■□□□□ 0.97
CIRBP-238	ENST00000592412	NEDD9	Q14511	834 aa		21.14	■□□□□ 0.97
CIRBP-238	ENST00000592412	PTPRO	Q16827	1216 aa		21.14	■□□□□ 0.97
CIRBP-238	ENST00000592412	GNPTAB	Q3T906	1256 aa		21.14	■□□□□ 0.97
CIRBP-238	ENST00000592412	TIGD5	Q53EQ6	642 aa		21.14	■□□□□ 0.97
CIRBP-238	ENST00000592412	FAM26D	Q5JW98	314 aa		21.14	■□□□□ 0.97
CIRBP-238	ENST00000592412	LMBR1	Q8WVP7	490 aa		21.14	■□□□□ 0.97
CIRBP-238	ENST00000592412	IFIH1	Q9BYX4	1025 aa	Known RBP	21.14	■□□□□ 0.97
CIRBP-238	ENST00000592412	PRR33	A8MZF0	331 aa		21.13	■□□□□ 0.97
CIRBP-238	ENST00000592412	IFIT3	O14879	490 aa	Known RBP	21.13	■□□□□ 0.97
CIRBP-238	ENST00000592412	FIBP	O43427	364 aa		21.13	■□□□□ 0.97
CIRBP-238	ENST00000592412	STAM2	O75886	525 aa		21.13	■□□□□ 0.97
CIRBP-238	ENST00000592412	PDE4A	P27815	886 aa		21.13	■□□□□ 0.97
CIRBP-238	ENST00000592412	TRAF1	Q13077	416 aa		21.13	■□□□□ 0.97
CIRBP-238	ENST00000592412	EXOC6	Q8TAG9	804 aa		21.13	■□□□□ 0.97
CIRBP-238	ENST00000592412	PABPC5	Q96DU9	382 aa	Known RBP	21.13	■□□□□ 0.97
CIRBP-238	ENST00000592412	RC3H2	Q9HBD1	1191 aa	Known RBP	21.13	■□□□□ 0.97
CIRBP-238	ENST00000592412	CHRNA1	P02708	482 aa		21.12	■□□□□ 0.97
CIRBP-238	ENST00000592412	SSTR3	P32745	418 aa	Predicted RBP	21.12	■□□□□ 0.97
CIRBP-238	ENST00000592412	ANTXR2	P58335	489 aa		21.12	■□□□□ 0.97
CIRBP-238	ENST00000592412	ARHGAP4	P98171	946 aa		21.12	■□□□□ 0.97
CIRBP-238	ENST00000592412	USP17L6P	Q6QN14	398 aa		21.12	■□□□□ 0.97
CIRBP-238	ENST00000592412	RUFY4	Q6ZNE9	571 aa		21.12	■□□□□ 0.97
CIRBP-238	ENST00000592412	PIBF1	Q8WXW3	757 aa		21.12	■□□□□ 0.97

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms